Basic Information

Insect: Scaptomyza hsui
Gene Symbol: -
Assembly: GCA_018152825.1
Location: JAECXO010000073.1:8006157-8010094[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00038 0.032 14.8 0.1 1 23 149 172 149 172 0.96

2 14 0.0017 0.14 12.8 3.1 2 23 221 243 217 243 0.90

3 14 0.012 0.96 10.2 0.8 1 23 352 375 352 375 0.93

4 14 1.3 1e+02 3.8 5.1 2 23 424 446 423 447 0.95

5 14 0.0043 0.36 11.5 0.1 1 23 505 528 505 528 0.88

6 14 6.5 5.4e+02 1.5 1.8 2 14 547 559 546 571 0.82

7 14 0.00066 0.054 14.1 3.3 2 23 579 601 579 601 0.96

8 14 0.0011 0.088 13.4 0.1 1 23 699 722 699 722 0.95

9 14 8.3e-05 0.0068 16.9 0.2 1 23 772 795 772 795 0.94

10 14 0.0011 0.091 13.4 2.2 2 23 845 867 844 867 0.97

11 14 0.003 0.25 12.0 1.7 1 23 949 972 949 972 0.91

12 14 0.05 4.1 8.2 1.5 1 21 1024 1044 1024 1045 0.95

13 14 0.85 70 4.3 0.2 3 23 1089 1112 1088 1112 0.89

14 14 1.5 1.3e+02 3.5 0.4 1 23 1130 1154 1130 1154 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00038	0.032	14.8	0.1	1	23	149	172	149	172	0.96
2	14	0.0017	0.14	12.8	3.1	2	23	221	243	217	243	0.90
3	14	0.012	0.96	10.2	0.8	1	23	352	375	352	375	0.93
4	14	1.3	1e+02	3.8	5.1	2	23	424	446	423	447	0.95
5	14	0.0043	0.36	11.5	0.1	1	23	505	528	505	528	0.88
6	14	6.5	5.4e+02	1.5	1.8	2	14	547	559	546	571	0.82
7	14	0.00066	0.054	14.1	3.3	2	23	579	601	579	601	0.96
8	14	0.0011	0.088	13.4	0.1	1	23	699	722	699	722	0.95
9	14	8.3e-05	0.0068	16.9	0.2	1	23	772	795	772	795	0.94
10	14	0.0011	0.091	13.4	2.2	2	23	845	867	844	867	0.97
11	14	0.003	0.25	12.0	1.7	1	23	949	972	949	972	0.91
12	14	0.05	4.1	8.2	1.5	1	21	1024	1044	1024	1045	0.95
13	14	0.85	70	4.3	0.2	3	23	1089	1112	1088	1112	0.89
14	14	1.5	1.3e+02	3.5	0.4	1	23	1130	1154	1130	1154	0.84

Sequence Information

Coding Sequence: ATGGAAGGTATGGACCTATGGACATCTATGTTTTCGGCCGACTTTGAAGAGGGTGATGGCGAGGCAAACACTCATAATTATGCAGACGAGTTTATGGGAGAAGACGAAGATGCGACTGAGCAAGAGGCATCTAATGATAAAGTCGAAAAAGGACCCGAGCCAGATGACGATGCCATATTTGATTTTGAGTTGACGCCAATTGTTAGCCTTACCGAGCCCGAACCAGAACCATCGCCAAGACAATCTGTACGATTGGCGCCACCAATACCGACTGCTGCGCCCGTGCGAGCCCCGCATCATCCTCAACCACCGTATGGCTCCTCTTCTTCTCTAACGGGAGGAGGTCGCAGTGAAGCCGCTGCCCCACTCACACGACCAACGACATCACAAATCAATGCTATTGACGGGAACGGAATGCTCATTAATTACGAACTGGGAGTCATCTATATATGCCCCGCATGTGGTGCTGAATACCGGCAGCAGGATATGTGGAAACGTCACATGAACCAGATTCATCAGTATAACACACGCCGTGGCCTCAACTTTGTGGCCATCGATAAGCTGTATCATCGGTGCCTGGAGTGCAACAAGCGGATTGCGATGCACAGCCGGGAGAATCTCCTCAAGCACAAGTTCACCCATTTGCCATTTCGTTGCACCAAGTGCTACATCTGCAAGCGTGAGTACAAGTACAGGCAGGACCTAATGGTGCATTTGCGCATGATACACAGTGAAGAGGTTATTGCCATGATGCGCGAAACTGATGCCAGTGCTGGACGCAAGACACGAGTTCGATTACCGCGCGTGGAGCAGCGTGTTCGTGGTGCGGGTCGGTTCTATTCGATCGCCAATGGGCCGGTTCCCGACGAAGATGAGGACTGCATAGAGGTCAAGAACGAGCTGATGGAAGCCGAAGCAATTACTGGCGATGCAGCTAATGAGGATCATGACGAGCGAAAGCAGAAAAAACGTGCTGATGGACCAACCATATCTGGCAATGCCAAAAATGGACTTGCAAGTGGCGCGTCGGATATCTGCGAGGACTATATACATTACATGTGCCCCGATTGTGGAACCGACTGCGAGACGCATGCACAGTGGAGCCAGCATATTGAATTTGTGCACGATTATGTGAGCCGGCGGGGATTGAACTTTCGTAGCGTTGACATGCAAATGCAGTGCATCGAATGCAAGGAGTTTGTCACCCCGAATACCATCAAGACTCTGCGCGCTCACAAGTTTAGCCATTTGCCGCAGCCGGACTGGATGCGTTGCAAGCTGTGCTACCTGGGATATACCGAGCATCATGAGCTAGTCAAGCATCTGCTCAAGCAGCATCATCTGGAGACGTTGGTGCCCGAAGAAGAGCAGGAGGCGGGGCCTAGTGCCACGGCCGGTGCTGATGATGCTGAGGACAATGGTTGTGATGATGAGCCCTTGGTGCAGTTGGATGATGGACCACGTCGTGGTGGCCGCATTACTAGCGATGATATGTATGAGCCGCACATTGATTATCTGTGCCCGCAGTGTGGCCGGGAATTCATTGAGAAGAAGCAGTGGCGCACTCATGTCGTCCAGGTGCATGGCATGAACGATATGACCAAACTGAACTTTGAGGTCTTCAACGATCGCCAGCTTAAGTGCACAGAATGCGACAAGATCATCACGAACGCCTATGGCATACAGAATGCCCAGCAGCACAGGATGACGCATCTGCCGTACAAGGCATATGCGCGCTGTCGCAAATGCCACAAATCCTATACTGATCGCAAGGGTCTGGTCAAGCATTTGGCAACATACCATCGTATCGGCAACGAACAGCACAAATCGGGTGCTGGAGGAGTCGCTCCTGGTGTGGGTCAGAGCCAGGCCAAGCCAACAGCGCCGCGCAAACAAATTGTGACTGTTGCCAATGAAACGTATGAGATTACCTATTTGGATGAGGAACAATCACCGCCAAGTAGTAACAATGTTCATGAGGAAAGCGATTTTGGTGAGCAAATGCTAGCGGATGATGATGATTATGCAACTGGCACACGTCAATTGCCATCAACTGGCGCTGGCTCCTCTGCATCCAATCTGAATGCGAATCGTTATAAATGCGTTGATTGCGGCTCCTTGTTTGCCACACAGACAGCGCTAAAAATACACATTAGCGAGGAGCACGATTTCACGGACACCCAATATAGTGCCAAAAAGTTTGACAATGACAAAGCTTCCGATGCGATACCGCGTGGCACAACATCCAGGACAGCCGCCAAATCACCACCGAAAATCTTTTCTGGCGGTACGACAATTGAACAGAACTATATATATCTGTGCCCGTCCTGTGGCAAGCCGTACAAGACACAATTTGAGTGGCGTCGCCACATCAACGAGGTGCACAACTTTGATAAGCGGCAATATTTGAATATGCGCCAGCTGGACAAGTATCGCTATCAGTGCACACAGTGCAAGGACACTGTAAGCAATTCAAAGCTAAAAGGACTGCAGGATCACCACTTTCGACATCTGCCCTATCGGCTGTACCTAAAGTGTCTTGTCTGCGGCACCTGCTACAATCATAAGCCCAACATAGCTGCCCATCTACGCACGCGTCACAACATATTTGAGCACGGCACGCCCTGGCGTGAGACGCAGTCCAAGCCACAGAATGGCCATGAAACCAGCAAGTACAAAGAAGTGCCAGATGCTCCGGATAAGTCAGTCTCACCTGCGCCTGGCAGCAGCACTGGTCGCACACTAAAACCGCAGCTAGGGGTACTGCCAACGCGACCCGCTGGCCTAAATACACTGGAGGATAGCATCTCCTATCACAATGCAGTTGATCTGGACTTCATAACGTACTTTTGCCCAAAGTGCAATAAGAACTTTGATTCGCACGCCTTCTGGCGCAAACACATTGTCGAAGAGCACAATCTGAACAGTCGGCAGGGCCTAAACTTTCGCCAGATTGACAATCATCACTATCTGTGCCTGGAGTGCTACAAACGCGTGACCGTCACCCACACCAAGGGTGCCATTGGTCAGCTGCAGTCGCACAAGTTCCGGCACCTTCCCTATCGCTCTTTCAAGTGCTTGACCTGCAACGGCGAGTTTGTGCGCAAACAAATGTTCTTCAAGCATCTGAACCGCGACACCAATCGTTGCGATAGCAAACCTTTAAGCGAAGAGCGTTTCGATGAAGACAATAGCCATGCAGAGCAGCCGGAAAGAACAGCATCCGGTAACGAAGCAATCGATGCCGCTTCGTATCGCCTGCTGTGTCCGCAGTGTGGCGATAACTTTAGCACCACCGCTAAATCCCTCTGGCGCAGGCATATTAACATTCAACATGGTATGGGCAAGCGTGAGGCGCTGCACATGTGCAAGCTGGGCGACGAGCTCTATCGCTGCATGGATTGCGACGAGCAGCTGGCAACAAAGCAGTTGCGCGCGCTGCAGGAGCATCGTTTCCGACATTTGCCCTTTGCTGCTTATATACGCTGCCAGCTGTGCGAGCAACAGCAGCCAGATGAACTGGGTCACGGACCCGCTGCGGCCGGCATGCACAGTATGGAGGAGCTGCAGCAGCATATGCGCGATGAGCATCCCTCGTATGCAAAAAACGATGAGCACATGCAAGTGCAACAAGATGCGGATGTGGATGATGACAGCCAGCTGTGTGCGGCTGCGACCAACAACGAGGCGTCCGACAGTGGTCCATATATGCCAATGCCGCTAGAAATGCTACTTGACGGTGAGGGAGATGAGGATGAGGCGGCAGCTAGCAATGATGCTTCCGGCAATGGGCGGTATATGCCAATGCCGCCACATCTGCTCGATGATGAAGCTGACGACACAGAGTTCGAGGATCAATATCTACTGGGTTAA
Protein Sequence: MEGMDLWTSMFSADFEEGDGEANTHNYADEFMGEDEDATEQEASNDKVEKGPEPDDDAIFDFELTPIVSLTEPEPEPSPRQSVRLAPPIPTAAPVRAPHHPQPPYGSSSSLTGGGRSEAAAPLTRPTTSQINAIDGNGMLINYELGVIYICPACGAEYRQQDMWKRHMNQIHQYNTRRGLNFVAIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPFRCTKCYICKREYKYRQDLMVHLRMIHSEEVIAMMRETDASAGRKTRVRLPRVEQRVRGAGRFYSIANGPVPDEDEDCIEVKNELMEAEAITGDAANEDHDERKQKKRADGPTISGNAKNGLASGASDICEDYIHYMCPDCGTDCETHAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCIECKEFVTPNTIKTLRAHKFSHLPQPDWMRCKLCYLGYTEHHELVKHLLKQHHLETLVPEEEQEAGPSATAGADDAEDNGCDDEPLVQLDDGPRRGGRITSDDMYEPHIDYLCPQCGREFIEKKQWRTHVVQVHGMNDMTKLNFEVFNDRQLKCTECDKIITNAYGIQNAQQHRMTHLPYKAYARCRKCHKSYTDRKGLVKHLATYHRIGNEQHKSGAGGVAPGVGQSQAKPTAPRKQIVTVANETYEITYLDEEQSPPSSNNVHEESDFGEQMLADDDDYATGTRQLPSTGAGSSASNLNANRYKCVDCGSLFATQTALKIHISEEHDFTDTQYSAKKFDNDKASDAIPRGTTSRTAAKSPPKIFSGGTTIEQNYIYLCPSCGKPYKTQFEWRRHINEVHNFDKRQYLNMRQLDKYRYQCTQCKDTVSNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIFEHGTPWRETQSKPQNGHETSKYKEVPDAPDKSVSPAPGSSTGRTLKPQLGVLPTRPAGLNTLEDSISYHNAVDLDFITYFCPKCNKNFDSHAFWRKHIVEEHNLNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDSKPLSEERFDEDNSHAEQPERTASGNEAIDAASYRLLCPQCGDNFSTTAKSLWRRHINIQHGMGKREALHMCKLGDELYRCMDCDEQLATKQLRALQEHRFRHLPFAAYIRCQLCEQQQPDELGHGPAAAGMHSMEELQQHMRDEHPSYAKNDEHMQVQQDADVDDDSQLCAAATNNEASDSGPYMPMPLEMLLDGEGDEDEAAASNDASGNGRYMPMPPHLLDDEADDTEFEDQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -