Basic Information

Insect: Scaptomyza hsui
Gene Symbol: RREB1
Assembly: GCA_018152825.1
Location: JAECXO010000001.1:19969084-19975684[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.025 2.1 9.1 0.8 1 21 223 243 223 245 0.93

2 12 0.00023 0.019 15.5 0.2 1 23 255 277 255 277 0.98

3 12 0.38 31 5.4 2.4 2 20 375 393 375 395 0.93

4 12 0.011 0.95 10.2 0.2 1 23 537 559 537 559 0.97

5 12 8.6e-06 0.00071 20.0 0.7 1 23 569 591 569 591 0.99

6 12 0.00058 0.048 14.3 2.0 1 23 597 620 597 620 0.97

7 12 0.0021 0.17 12.5 2.0 1 23 695 718 695 718 0.95

8 12 6e-05 0.005 17.4 0.3 2 23 1071 1092 1070 1092 0.97

9 12 0.1 8.3 7.2 6.3 1 23 1098 1121 1098 1121 0.97

10 12 6.5 5.4e+02 1.5 3.4 1 23 1233 1256 1233 1256 0.78

11 12 0.0059 0.49 11.1 0.5 3 23 1319 1339 1317 1339 0.96

12 12 0.00093 0.077 13.6 4.8 1 23 1345 1367 1345 1367 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.025	2.1	9.1	0.8	1	21	223	243	223	245	0.93
2	12	0.00023	0.019	15.5	0.2	1	23	255	277	255	277	0.98
3	12	0.38	31	5.4	2.4	2	20	375	393	375	395	0.93
4	12	0.011	0.95	10.2	0.2	1	23	537	559	537	559	0.97
5	12	8.6e-06	0.00071	20.0	0.7	1	23	569	591	569	591	0.99
6	12	0.00058	0.048	14.3	2.0	1	23	597	620	597	620	0.97
7	12	0.0021	0.17	12.5	2.0	1	23	695	718	695	718	0.95
8	12	6e-05	0.005	17.4	0.3	2	23	1071	1092	1070	1092	0.97
9	12	0.1	8.3	7.2	6.3	1	23	1098	1121	1098	1121	0.97
10	12	6.5	5.4e+02	1.5	3.4	1	23	1233	1256	1233	1256	0.78
11	12	0.0059	0.49	11.1	0.5	3	23	1319	1339	1317	1339	0.96
12	12	0.00093	0.077	13.6	4.8	1	23	1345	1367	1345	1367	0.99

Sequence Information

Coding Sequence: ATGGAAACGCCGCGACAGCGACGTGATTCCAGCACCTCAGAATCCTCGCTGGAGCATCTGGATTTGGGCCGCACACCCAAAAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGGCGGCTCTTCGCCCCAGGGTCTCTCCTCGTGCCTGTCGAGCGCCGAATCGGGCATTGGAGCCGGAGACGAGCACATGAAGTATCTATGTCCCATCTGTGAGGTTGTCTCGGCCACGCCCCACGAATTCACCAATCACATTCGCTGCCACAATTACGCCAACGGCGACACCGAAAACTTTACTTGCCGCATCTGCTCCAAGGTTCTGTCATCGGCATCCTCCCTAGATCGTCATGTCCTGGTTCACACTGGAGAGCGTCCGTTCAACTTGAGGGAGGAGGATAGGGATCGAGTGGAGGATCGGGATGATTCGGATGTGGAGAGCGTTGATAGCGTTGCCCAGGTCATAACCAGTACACCGGATGTGGCAACTCTGCTCGCCTCGGGTGGCACTTCACCCACCCACTCCCATTCCCACTCCCAATCGCCCTCTCCGCCCCTGATGCTGCAGAGCTGCCCCGCCTGCAATATGGGTGAATTTGAATCCGTGCCAGCGCTGTGCGCTCATCTGGATGCCGAGCATGCGGACATTCCGGCCAAGTGTCGGGAGTGTGAGGTGATCTTTGCCACACATCGACAGCTTCAGTCGCACAGCTGTCGAGGATTACCGCCACTCCTCGGTGTAAGTTCCTCTCCACTGCACAAGCAGGAGCAGGACGAGGAGGTTGAGGAGGACGAGGAGGCAGAGGATGGAGAACACCAGCAAGAGGAGGAGCAGAAGGAGCAGCGAGAATGTGAAGATTTCTTCCAGCAGCTCTATCTCAAGAACAAAGCATCCACTGCGAACCTTCTGCCCTCCCCGATCAAACATGAGCCAATGACGGATCAGCGTCAGGATCTGGCCGATATCCAAAGCATTCTCAACATGACCAGCTCCAGCTGCACCTCCAGTTTCCTGCGCAACTTCGAGCAGTCCGTGAACACACCCTGCTCCAGCCAGTACAGCGTGGACGGACGTGATGGCGAGGAGGAGGCCCAAGATGCCTTCACCAGCGAGTTCCGGCGCATGAAGCTCCGTGGCGAGTTCCCCTGCAAACTCTGCAGCGCCGTCTTTCCCAATCTTCGCGCGCTCAAGGGACACAATCGCTACCATCTGGCCGAGGTGGGAGCTGCCGGACCCTTCCGCTGCAACATGTGCCCCTACGCCGTCTGCGACAAGGCAGCCCTGGTACGTCACATGAGGACCCACAACGGGGACCGTCCGTACGAGTGTGCCGTATGCAACTACGCCTTCACCACCAAGGCCAACTGTGAGCGTCATCTGCGCAATCGTCACGGCAAGACGAGTCGCGAGGATGTGAAGCGTGCCATTGTCTATCATCCGGCTGAGGATGCCAGCTGCGAGGACAACAACAACAAGTCCCGTTCCGATGCGGACCTCCTCCAGGAACTGGGTGGTGGTGCAGGTGGTGGAGCGGGTGGTCCCGTCAAGATGGTCATCAAGAACGGCGTCCTCATGCCGAAGCAGAAGCAGCGTCGCTACCGCACCGAACGTCCCTTCGCCTGCGAGCATTGCTCGGCCAGATTCACCCTCCGCTCCAACATGGAGCGCCACGTGAAGCAGCAACATCCCCAATACTATGCCACACGGCAGCGCAGCGGTCACCATGTGATGCGTGGTCGTGCTGCATCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCATGCACCGATCTCGGAGGAGGTGAAGTATGCGATCTTGGCGCAGCAGTTGAAGGCTCGCAAGGATACGGATCTGTTGCAGCAGGCTCTGGCACATGGCTCCAGCAGCGTTGTGGCTAATCCTCTCCTCCACTTTCCCTACACCAACAACAACAACAACAACAACACCAATAGTAAGCAGCAACAGTTGGTGGATGATGATGAGCCACCCAAGCTGATCATCGACGAGGATGATGAGGATGTGGAGGGTTGCGAGGACGATGGTGAGGGTGAGGGTGAGGAGGAGGAGGAGGAGCAGGACTTTGATGTGGATGAAGAGGAGCAAGAGGATGAGGAAATGCCAGAGCACAGACAAGTGGAGGATGAGCCCAAGAGCGCCAAACCCATGGAGGCAGCCAAAAAGGTAGCCGACATCATCCTCGAGCAGGCAACCAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACATGTGGTGGAGTCCAAGCCTCAAGGAGCGCCAACCACAATGAAGACCATGATTGCCCAGGCTGAGTCGGTGGCCAAATCCCTGAAGGAGGTGGCCAGCTCACCGTTCAAGGACGAATCTCAGGATCTGGTGCCGGTGGCCAAGCTGGTGGACAATGCCACCAGCAATCAGGTGTCCTTCAACAGCTACTTCCGGCCCAGCGACGTCGCCAACCACATGGAGCAGAGCGACGAGGAAGGCCTCGTTGCCAGCGGCAGTGCCAGCGAGAGCAACAACTCCGGCACCGAGGACGTCACCAGCTCCTCCAGCAGCTGCGGCAACGATACCAAGAAGAAGTCCGCCTACAGCCTGGCACCCAACCGGGTCAGCTGTCCCTATTGCCAGCGCATGTTTCCCTGGAGCAGCTCCCTGCGTCGCCACATCCTCACCCACACGGGCCAGAAGCCCTTCAAGTGCTCCCACTGCCCGCTGCTCTTCACCACCAAGAGCAACTGCGATCGCCATCTGCTGCGCAAGCACGGCAACGTGGAGTCCGCCATGTCCGTCTATGTGCCCACCGAGGATGTGAGCGAGCCCATTCCCGTGCCCAAGTCCGTCGAGGAGATCGAGCTGGAGGAGCAGCGCCGGCGCCAGGCGGCCGAGGCCGAGCAGGCCGAACGGGAGCGGGAGCGGGAGCGCGAGAGGGAGCGGGAGCGGGAACGCGAGAGGGAACGGGAACAGCAACAGCTGATCCAACAGCTGCGTCAACAAATGGCTGCCGCTGCAGCTGCTGCCGCCGTAATCGCTGCTCCCACTCCCACTCCGGCCCAATCCCAATCGCCAAGTGCCTTGGAGGCGAGCAGTGATCTGCCCTACAAGTGCCATCTGTGCGAGTTCTCGTTCGGGGAACGGCTGCAGTGCCTCGAGCACATCAAGCAGCTGCATGCTCATGACTTTGCTCTCCTCCTGGCCAAGGGTGCCATCGAAACGGATGCACAACAACAGCAGCAGCAGCAACAACTGTTGCCAGCTAATCCGCATTCGGATGATGAGGCTTCGGCTGGAGCGGCTGGTGTGGCTGGCATCCGATCCGGTGGCAAGTATCCGGATTATAGCAACCGGAAGGTGATCTGCGCCTTTTGCGTGCGTCGCTTCTGGTCCACGGAGGATCTGCGCCGCCACATGCGCACCCATTCCGGCGAACGTCCCTTCCAGTGCGAGATCTGTCTGCGCAAGTTCACCCTGAAGCACAGCATGCTGCGGCACATGAAGAAGCACAGTGGACGCAGTCATAATGGCGGCGAGCTCGATCATCAGTCCGACTGCTCCGACGACGAGCAGATGATGTCCTGCTCGCCACCCACAACGCCAACACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATCAGTGATCAGGGCATACTCAACAAGCTGCTCTCCTCACCCGACGAAGCGGCCAAGCTCCTCGGCGTGGAGAAGTAA
Protein Sequence: METPRQRRDSSTSESSLEHLDLGRTPKKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGSSPQGLSSCLSSAESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNLREEDRDRVEDRDDSDVESVDSVAQVITSTPDVATLLASGGTSPTHSHSHSQSPSPPLMLQSCPACNMGEFESVPALCAHLDAEHADIPAKCRECEVIFATHRQLQSHSCRGLPPLLGVSSSPLHKQEQDEEVEEDEEAEDGEHQQEEEQKEQRECEDFFQQLYLKNKASTANLLPSPIKHEPMTDQRQDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSQYSVDGRDGEEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRYHLAEVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREDVKRAIVYHPAEDASCEDNNNKSRSDADLLQELGGGAGGGAGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYATRQRSGHHVMRGRAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHAPISEEVKYAILAQQLKARKDTDLLQQALAHGSSSVVANPLLHFPYTNNNNNNNTNSKQQQLVDDDEPPKLIIDEDDEDVEGCEDDGEGEGEEEEEEQDFDVDEEEQEDEEMPEHRQVEDEPKSAKPMEAAKKVADIILEQATKXXXXXXXXXXXXXXXHVVESKPQGAPTTMKTMIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSCGNDTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQAAEAEQAEREREREREREREREREREREQQQLIQQLRQQMAAAAAAAAVIAAPTPTPAQSQSPSALEASSDLPYKCHLCEFSFGERLQCLEHIKQLHAHDFALLLAKGAIETDAQQQQQQQQLLPANPHSDDEASAGAAGVAGIRSGGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGGELDHQSDCSDDEQMMSCSPPTTPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -