Shsu014777.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- CAMTA1
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000002.1:1283717-1311452[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.32 6.3e+03 -3.0 0.1 8 29 118 138 116 148 0.61 2 2 7.4e-50 1.5e-45 153.8 2.2 2 116 217 329 216 329 0.98
Sequence Information
- Coding Sequence
- ATGAATCTGAATCTGAATCTGAATCGAAATCTACAGCAAAACCATACAAAGAATGGCCTGAGCCGTGTTAGCCTGGTCAGAACGCAGAGCAGCGGCAAGCTAAGCCACAGCAATGAGGCCGAAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGCTGCGAGGCACACGCAACGAAAATGGCCAGATCATCATCCAGAATAAACAGGATATTCTCAGTCTGCTCAACGAACAGCAGCAGAATAAGGCAACGGCCCTGACGCTCAATCAGTTGCCCACAACAACAACTGTGGCGCGCAAAACAATTGTACAAACAACAACAGCAACAAGCAGCAACAGCAACAACATAAGCACTGGTGGCAGCATCTCCATCGTATCCAGCAGTGGCAAGGAGTCGAATACGATCCTGCTGCAAACGCCCATCAATGCCAATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCGCAGCGACATCGTTGGAATACAAATGAGGAAATCGCTGCGATTCTTATCAGCTTTGATAAGCATAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAAAGTGGCTCTCTGCTGCTTTATTCCCGTAAGAAGGTGCGCTACAGACGCGATGGATATTGCTGGAAGAAGCGCAAGGATGGAAAGACGACACGTGAGGATCACATGAAACTAAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGTTACTGCAGAATCCGGACATTGTTTTGGTGCACTATCTAAATGTCCCATATCCGGATGATAATAAAATGGCCGTCATTGCGCCCAGCATTACGCTCTGGGGCGACAAGAAGGAGTGGACCAAGGAGGAGCTAGTCAGCCAATTGAAACCTATGCTTTCAACGGTCAACTCGGATGAGGACTCTGATTCTGGCAATGATATAGAAATCTCAACGGCCGAGACAGTTGAATCGATTGTCTGCCAGCTGATGGAGAAGCAGCGATTGTCGCGTCAGGCAGCGTTGGTCAAACAGTTGGATTGTGGCTGCGGAGAAGCAACTTGTGCCGATGGAAAGACTTGCACGCATCCCGTTATGCGACGCACTGGTGGCATCCTCAAATCCGTGTCGGAGAAGCGGCCCAATGATGCATACAGTACGGCCAATGGTACTCCCAATGTTGTGGTGGCCAGCAAGGTGAGTTCGGATTAA
- Protein Sequence
- MNLNLNLNRNLQQNHTKNGLSRVSLVRTQSSGKLSHSNEAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRGTRNENGQIIIQNKQDILSLLNEQQQNKATALTLNQLPTTTTVARKTIVQTTTATSSNSNNISTGGSISIVSSSGKESNTILLQTPINANGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGEATCADGKTCTHPVMRRTGGILKSVSEKRPNDAYSTANGTPNVVVASKVSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -