Shsu001230.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- CDC5
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000073.1:7171437-7173764[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.7 4.9e+03 -2.1 0.0 3 18 135 150 133 151 0.88 2 5 5.2e-12 6.9e-09 35.8 0.0 1 39 227 266 227 273 0.92 3 5 5.4e-06 0.0071 16.6 0.0 2 36 283 321 282 329 0.85 4 5 5.2e-07 0.00069 19.8 0.0 2 46 338 383 337 383 0.90 5 5 6.3e-10 8.2e-07 29.2 0.0 2 43 390 432 389 435 0.95
Sequence Information
- Coding Sequence
- ATGTGCGATCTGTTTAGCAAAGGGCAGGCATACCAAGATGAATTCCAGGCTTTAGCAACGCTGCTGTCGACCACAGCCCAAGGCGATGTAGACGCCCTGAAACTAAATCAGTCGCTTCAGCAAAGCCTAGAACTGTTCCGCCAACGTACGCTGGACCTGCTGCAGAAAGTGCGAGCGCGCTATAAACGTAACGAGGAGATTCTAGTAAGCCGACTACAGCCGCGCAGTGACAATGAAGTTGTTGGAATGAGCGGCGCTGTGCTCCGCGGGGGAACGTTTCGTTTTAAGGGTAATTTATATTTTCGTGATGCGGATGGACGGAGCTGTCCCAACAATGAGGACTACGAGAGTCGCAGCAACTACGAAATGTTTCCCACCGATTTCGATATGCGCTCCAAGCACGTCTGGACGGTGATGGACAAAAAAAATATCGTTATGGGTGTTAAGCAACAGCTGTTGGATCATGCCGCCTACAGGCCACAAATTAGTTCAATGGGAAAGGCCCGCAAACGCAAATGCATCGATTTGCACCAGCATACGGTGGCCCAATTGCTAAGTGTCGCGGACAGCAGCTTTAGAATCGATTGGAATCAAATCAGCACTCTGGACCTGGAATATCGTCATTCAGCCTACAGCTGTGAGGCCATGTGGCTTGTGTATTTGCAGCCGCAGATCAAGCGCGATGAATGGACAGCCGAGGAGGATCAGATTCTGCTGGCAGCTGCCAGGCAAAACAAGATGCAAAATTGGGTTGCCATTGCGGCTCGAGTTGAAGGGCGTTCGGACTATCAGTGCTTCGTGCGGGTGCAGACAGCGCTGCGCTCCAGTATCGAGCCAACGAACGGCATGAAATGGTCCTACCAGGACAGCGAGCGTTTGTGTGCACTTGTCATGAAGAACACGGTAAACGGAGTTGTTAATTGGTCGGAAGTGGCCGAACACTTTCCAAACAGAGCGCGATCCACACTAATTGGACGCTATGTGTATAGTCTAAGTCCTAACATAAGTCACGAACCCTTCACAAAGGAAGAGGATATTATGTTATTTGCTGCCGTTAAGGATTATGATGGAAAGTTCAATTGCTTTCCCCGCACGCTATTTCCCAATCGCTCACTGGCCCAGCTGCGGCATCGATATAAGAATGTTCTGGCACAGCGTAACAAAACTGAGAGCTGGTCGGTAAAGGATGACGAAAATCTGATGGCTTTTGTGGCCAAAAATGGCACCTCGCAGTGGGTGAACTGTGCTAATCATTTGGGCAATCATACGCGCACCAGCTGCCGCACACGCTTTATGGTCATCAAACGGTTTTTGGAGAAGAATCCAAATTCAACGGAGGCTGATTTACCACGACGCAAGACCCGCAGAAATGATTCAATTAACGCTGAAAATTGGGAGCAATGTTTGCAAGACATGCAAGCAGATCCTGAACGAGAGTTTGTGACTTCAAATCCAAGTCTATTGGTGGACTCACCACCACACAATAACATCACAAATTCTTCAGTTAAATGTGAAAACGATACAAGTTGGGATTTACGTTCAGAGGACTCAAAATCGGAATTACTGCCTAGAAAACAAAAGATAGTGTGCGACTCGGACTACTCCATGTATGAGTATTTTATGTTCGCCTATAATCTAAACCTGCAATCACCTGAGCTGCCAAGACCAATTCCTCGGAATGCGAATAATCTAAACGCTGTAGCTTATGCGCTACGTTTTGGGTCGCCCGAACGTAAACGCGTACTTTTAAAAAGCGCTTGTCTTCCCACGCAGCTGCTTATCTGCTACAATAGAATGCTTTGCGATTTGCCGCTGTGCAAAGATAATGCAGCATTGACGAAGTTGCTGCCGCCCAGCTGGTCCACAATGATGGGATTCCGGGCCATGTGCATATTGTCAATGCGGACTCCCATTACCTCCAATGATGTATCGGAGCCCGAAATTAGTTACGATGAATCTCAGCCAGAATTGCAGTTGTTTCGACAACGATTACGCACACTCTTCTATCGCACAACATTGTTGAGCCGCCTGGAGGTGTCGCCGTTCGAGGAGCTGCCAAATGTATTGACGAAACTGCCTGGTTCAATTGCAAATGACGTCTTGGTAAGCAACACAGAGCAAGATGACGTTAATGAAGCATGCGACCAAGTGCCCGATATAAGATTAAAGAAGAAACTTAAATCAAAATCTAAGCTGACTTAG
- Protein Sequence
- MCDLFSKGQAYQDEFQALATLLSTTAQGDVDALKLNQSLQQSLELFRQRTLDLLQKVRARYKRNEEILVSRLQPRSDNEVVGMSGAVLRGGTFRFKGNLYFRDADGRSCPNNEDYESRSNYEMFPTDFDMRSKHVWTVMDKKNIVMGVKQQLLDHAAYRPQISSMGKARKRKCIDLHQHTVAQLLSVADSSFRIDWNQISTLDLEYRHSAYSCEAMWLVYLQPQIKRDEWTAEEDQILLAAARQNKMQNWVAIAARVEGRSDYQCFVRVQTALRSSIEPTNGMKWSYQDSERLCALVMKNTVNGVVNWSEVAEHFPNRARSTLIGRYVYSLSPNISHEPFTKEEDIMLFAAVKDYDGKFNCFPRTLFPNRSLAQLRHRYKNVLAQRNKTESWSVKDDENLMAFVAKNGTSQWVNCANHLGNHTRTSCRTRFMVIKRFLEKNPNSTEADLPRRKTRRNDSINAENWEQCLQDMQADPEREFVTSNPSLLVDSPPHNNITNSSVKCENDTSWDLRSEDSKSELLPRKQKIVCDSDYSMYEYFMFAYNLNLQSPELPRPIPRNANNLNAVAYALRFGSPERKRVLLKSACLPTQLLICYNRMLCDLPLCKDNAALTKLLPPSWSTMMGFRAMCILSMRTPITSNDVSEPEISYDESQPELQLFRQRLRTLFYRTTLLSRLEVSPFEELPNVLTKLPGSIANDVLVSNTEQDDVNEACDQVPDIRLKKKLKSKSKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -