Shsu010520.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000004.1:2317833-2329579[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.1 2.8e+02 1.4 0.0 2 37 327 364 326 372 0.68 2 2 6.1e-19 1.7e-15 56.5 0.0 1 43 695 738 695 740 0.95
Sequence Information
- Coding Sequence
- ATGCCTATGGCTAGGCAGACATTTTGTGCGTGCGTGCGCTTAGAACGCGTCGCTGAGGAATTCATGGGCCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAGCCAATTGAATATCGCCGAGCAACAGCCCATATCAATAACGACGATAGAAACAGAAGACAGCGACTATCAGAAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAACAATACAGCAACGGCATATTGCAATTTGAAGAAGAATTTGACAACAACCACACATCACACGACCACGACTCAAGTGCAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTTAACGCCAAAGGCGAATTGGTGGCCGAAACAACGGCAATCGCGTCCATACACAATTGTAACAACAACAACAACAACATCAACGGCATAGCTGAGCATCAGCACGACAGCGACAGCAACTCGAGCGCATCACTGCACAATAGCTGCAGAAATATCAACAACAACAACAATAAAAACAATAATAACAACAACAGCAACAATAAGCATAGAGCACGCAACGGAACAAACTCCACCACGACTTCGTCATCAGCAGCGAGTACAATAGAACTTTACAAGTTATTCACCCAGAAAGCAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAACTGGCACAGTTCACAATGATGGCCGATTTCAATTTGATGAGCACGCTGGCCAATCAACAACAACAACATGCTAACTCGGTAACACCAACTACCTCGGAAGTATCTGCCGCAGCCGCCAGTCCCGCACTAAAAGATACACCCAGTCCCAGTGTAGATGCGCCCTTGGATCTAAGCAGCAAGCCTTCGCCAAATTCATCAATTAGCGGCGATATAAAGACAGCCAGAGCTCAACACAACTACAGTCACGAGGATCTGAATAGTGCGCTGCAGGATGTGCTGGTCAGCAAGCTTGCCACGACACGCAAATCCTTCAAGGATAACCATGTGCCGCGTGCCACGCTGCGCAACAAACTGTGCAAAATGTCGCTGGATGCCAAGCGACCGCAAGCACAGACGCCGCCAGAGTTCCAACAGCTGCACCACTACCTGGACCTGAAGCAGGACGAACAGTCGGGTGAGGAGGCTGGCGATGGCGATAGCAATGCCTCAACGCCAGCGCCCGGCTTTCAGGAGATTGCCCAACGCATTGTCGCCCAACGCATGTCCGAGCACAATGGCAGCGAGCTGGGCGATGATCTCCATGATGAGCCGGCCATGTCGCCAAAGTCAGAGCGACAGACGCCACCAACGGACATGCAAGCGGCCGCAGCAGCAGCAGCAGCCATGGCAGCGGCAACAGCTGGTGGCAACAACAACAATGCCACCGGACCGCCCATGCCAATTGATGCCAATGTGTTGTTGCATGCGCTGGTCCTTGCCTCAGGCATTGGTGTCATTCCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGTTCAAATCGCTGCTGATGGCCAACAGTGGCGGCATGATGAACGAGATGCTGACCTCGGGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATGCCGCATATCGTCGTCATATACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCGCTGGATGCAAATGAGGCGTGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGCGCACCGAGCGTCTCGCCCACCATATCGGTGGCCAAAATGATCGGTGGCACGGACACCTCCCGCTTTGGTGCCTCACCCAATCTGCTGGCGCAGCAACATCACAGCCATCTGCCACCCGCTCACCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAACGCGACCGAAGCGTGGTAAGTACCGCAACTACGACAGGGACAGTCTGGTCGAGGCCGTCAAGGCTGTGCAGCGTGGCGAGATGTCTGTGCATCGTGCCGGCAGCTACTACGGTGTGCCGCACTCCACGCTGGAGTACAAGGTGAAGGAGCGGCATTTGATGCGACCGCGCAAGCGGGAGCCCAAGCCGCAACCAGATCTCGTGGGGCTGACGGGAGCAGCGAATAAGATTAGCCTGACCGCGCTGAATAATCTGGACAAACTCAAGTCCGGCAATGTAGGCAATGCCAACAATAGCTCCGGCTCCAAGCTAAGCAATGCCTTGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCCAATGGCATTAAGTTGCCCATGTTTGATGCCACACCGCAGTTGTCCTTTCAGCCAAACATGTTCTGGCCACAGCCGAATGCTGGCGCCAACTATGGCCTGGACTTCAATCGCAATCCCGAATTTCTCAAGTCCCATCTGGCCGAGGTGATGCGCAATAGTCAGCTGGGCGGGGCGGGCAACCATCATGGCCACGGTGGCGCCCCTGGTCCCATGAAGAGTGCCCTGGAGTTTGCCGAGAACATGTACGATGGCATCATCCGCCAGAAGCTGAAGAGCGATGTGAACGACAGCAGCAGCGGCGGAGGCACTGGCAATGGCAATGCGCTGCTGGATCAGCTGCTGGTGAAGAAGACGCCGCTGCCGTTCACCAATAATCGCAGCAATGACTACCTCGGTGCCGCCGCCGCCGCCGCCTGTTCCACCTCCGAGAGCGTTAAACGTGCCGGCAGTCCCATGGGCGCCTATTCGGATGTAAAACGTGAACGTCTCAGTCCGATGCGAGGCGCGGATAGTGCCAGCAGTGATGATGATCACGAGCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACATCACGAGACTCGGAAACGGACGCCAGCAGCATGAAGAGCGAGCAGTCGCACAGCTCCTTGCCTGTCAACAACAAAATGATGGATCTCAATGGCAGTGTCAACAGTGTCAAATTCGAGTCGGAGCCGCAGCAGCCAGCGCAAATCTCGCCCAGCACCTCGATATTGCATGAGAAGCTGGCGCAGATCAAGGCCGAGCAGGCCGAAGTGCATGCGGCAAGCACCGAGGAGCAGTTATAG
- Protein Sequence
- MPMARQTFCACVRLERVAEEFMGRRKWKHYQDQLTRSQLNIAEQQPISITTIETEDSDYQKKPLNHRLAQPNGQQYSNGILQFEEEFDNNHTSHDHDSSATSRSSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTAIASIHNCNNNNNNINGIAEHQHDSDSNSSASLHNSCRNINNNNNKNNNNNNSNNKHRARNGTNSTTTSSSAASTIELYKLFTQKAAAEMTSMESMAAKLAQFTMMADFNLMSTLANQQQQHANSVTPTTSEVSAAAASPALKDTPSPSVDAPLDLSSKPSPNSSISGDIKTARAQHNYSHEDLNSALQDVLVSKLATTRKSFKDNHVPRATLRNKLCKMSLDAKRPQAQTPPEFQQLHHYLDLKQDEQSGEEAGDGDSNASTPAPGFQEIAQRIVAQRMSEHNGSELGDDLHDEPAMSPKSERQTPPTDMQAAAAAAAAMAAATAGGNNNNATGPPMPIDANVLLHALVLASGIGVIPKLDETQTLGDLFKSLLMANSGGMMNEMLTSGXXXXXXXXXXXXXXXXXXXXXXXNAAYRRHIPKSETPETSSSLDANEACEDPILKIPSFKVSGAPSVSPTISVAKMIGGTDTSRFGASPNLLAQQHHSHLPPAHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKSGNVGNANNSSGSKLSNALKXXXXXXXXXXXXXXXXXXXXXXPNGIKLPMFDATPQLSFQPNMFWPQPNAGANYGLDFNRNPEFLKSHLAEVMRNSQLGGAGNHHGHGGAPGPMKSALEFAENMYDGIIRQKLKSDVNDSSSGGGTGNGNALLDQLLVKKTPLPFTNNRSNDYLGAAAAAACSTSESVKRAGSPMGAYSDVKRERLSPMRGADSASSDDDHEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRDSETDASSMKSEQSHSSLPVNNKMMDLNGSVNSVKFESEPQQPAQISPSTSILHEKLAQIKAEQAEVHAASTEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -