Shsu007480.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza hsui
Gene Symbol
ct
Assembly
GCA_018152825.1
Location
JAECXO010000001.1:4366622-4380654[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.3e-27 4.3e-23 81.3 0.0 3 72 333 403 331 408 0.95
2 3 4.3e-32 4.2e-28 97.3 0.0 3 77 832 907 830 909 0.96
3 3 2.6e-31 2.6e-27 94.8 0.0 3 76 1115 1189 1113 1192 0.96

Sequence Information

Coding Sequence
ATGTCCAATGCCACAGCCACAGCGGACAGCAATGAGCTAAAAATCAAAAAGGAACAGCACAGTCCATTGGATCTGAATGTGCTCAGTCCACATTCGGCTATTGCCACAGCTGCAGCTGCTGCAGCAGCCGCTGCCTGCGCCAACGATCCAAATAAATTCCAAGCTCTGCTGTTGGAACGCACCAAAGCCGTCCTGGCCGCCGAGGCTCTGAAGAATGGCGTCAGCGATCCAACGATTGCCAGCAGCAGCGATGAAATGCCGCAACAACAACAAGCAGAAGCTGTCGTCGCAACAACACCAAAACAAGTTAAAGATGATCAAGCAGATGCAGAAGAAGAAGAAGAAGAAGCAGAAGAAGTCACAGCTACAGCAACTGCAGAAACAAGCGAAAATGCAAAGGAAACGAGTGAAATTGAAACATTGACAGTCGAGGCAAATTTGCAGCCCAAAGTCGAAATCATTGAGACAGAAGACGATGCTGAGATTGTCGCTGGCCAAACACTGGAAGAGCAGCTGCTGTTGCATGCAGCAGCGCATCATCTGCACCACGGCGCCGACTCCAACTCCTCCAGCGCCACAAGCACGCCCAACAGCACAGCCCAGCTGGCGGCAAGCATTGCCAGCACCCTCAACGGCAACAAGTCGCTGTTGCAACAAGCTGCTGCCGCCGCCAGTGTCGTCGAGGACAACAACAACAGCCTGACACCGAATGCCAATGCAGCGGTTGCCGCTGCCGCAATGGCAGCCAATGCCCAGCATGCGGCCGCCTTCTTGCCCAATCTGCCCAACTTTCCCGGCCTGCCGTTTCAATTTGCGGCCGCTGCCGCCGTTGGCCAGGAGGCACGTGCCCACTTTCGCTTTGCGGATGCCGAGCTGCAGCTGCAGCCGGGCGTCTCGATGGCGGGTCGGCTGGGCGAGTCCCTCATACCCAAGGGCGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAACCAGGCGCTCGACACGCTGCACATCTCGCGCCGTGTGCGGGAGCTTCTCTCCGTGCACAACATTGGACAGCGCCTGTTTGCCAAGTACATTTTGGGTCTGTCGCAGGGCACGGTGTCGGAGCTGTTGAGCAAGCCAAAGCCGTGGGATAAGCTGACCGAGAAGGGTCGCGACAGTTACCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTCATGCTACTCAAATCCCTTATACCCAAGAAAGATTCGGGACTTCCACAGTATGCTGGACGCGGCGCTGGTGGCGATGATTCCATGTCCGACGATCGCCTCGCACTCATTCTCAGCGAGGCCACCTCCCTAATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCCGCCGCTGCCGCCGCCGCTGTTGCCGTGCACCAGCAGCGGGAGCGGGAGCAGCGGGAACAGCGGGAGCAACGGGAACAGCGGGAGGCAGTGCAGCGGGAACAGCAGCAGCGCATACGTCACGAGGATCTGGCACAGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACACGCACACCCCGTGAGGCAGCCTTTCCTGGCTTTTTGTTGTCACCGTTCTTTGGCGGCGCCGCTGGCATGCCCGGAGCACCAGCCAATCCATTCCCCGGAGCAATGGGCGCCGATGAGAATATGCGTCACGCCCTGGAGCGCGAGATAGCCAAGCTGCAGCAACAGCAGGCAGCCAGTTTTCCCAACTTTTCCAACCTGATGGCACTGCAGCAGCAGGTGCTGAACGGTGCCCAGGATCTGTCCCTGGCCGGCAAGGACATCAAGCTGAACGGACAGCGCTCCTCCCTGGATCAGCACAGCGGCGGCAGCAGCAGCTGCTCCAAGGATGGCGAACGCAACGACGACAACAACGAACGCAGCTACCCCGCCCTGCCTCTGCCCCATGCTCGCAAATCCGAGGGCGGCAACACACCCGCACCGCCCGCCCCACCCGCCGTACCCACTGCCGGCGGCAATAGCAACTCGAGCGCTGCAGGCGCCAACGCCAACAGCGGCGGCGGCGGCGGCGGCGTCGGACATGGCAGCAACTCCGCGGCGCCCAGTCCACTGAGCAACTCCATACTGCCACCAGCGCTGAGCAACCAGGGCGAGGAGTTTGCGGCAACGGCGAGTCCGCTGCAGCGCATGGCCTCGATCACAAACTCGCTGATCACCCAGCCGCCAGTGACGCCGCACCACTCGCAGCCGCAGCGACCCACCAAAGCGGTGCTGCCACCGATCACGCAGCAGCAGTTCGATATGTTCAACAATCTGAACACCGAGGACATTGTGCGGCGGGTGAAGGAGGCGCTGTCGCAGTACAGCATCTCGCAGCGTTTGTTCGGTGAGTCTGTGCTGGGCTTGTCGCAGGGCTCCGTCTCCGATCTGCTGGCACGCCCCAAGCCCTGGCACATGCTCACCCAGAAGGGACGCGAGCCCTTCATACGCATGAAGATGTTCCTCGAGGACGAGAATGCGGTGCACAAGCTCGTGGCCAGCCAGTACAAGATTGCGCCCGAGAAACTGATGCGCACCGGCAGCTACAGCGGCAGTCCCCAGATGCCGCAGGGCCTGGCCAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCCGCCCAGGCCCAGCACATTATGCAACAGATGCAGGCGGCCGCCGCCATGTCCGCGGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCGCCGCAGCATGCGATTAGTCTGCCCGCAGCGGTGACGCCCGGCGGCGTACCAAGTGGTGCAGCTGGTGGTGGTGTCGGCGCCACAGCGGGCAGCACGCCCGGCAGCAGTGAGAAGAAGCCTATGATGATGCCCGTGCTGGGTGGGGCACATGCCCCAAATGCGATGCGCAGCCTGCACCAGCACATGTCGCCGACGGTGTATGAGATGGCGGCGTTGACCCAGGATCTGGACACGCACGATATCACCACGAAGATCAAGGAGGCGCTGCTGGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTGGGCCTGTCGCAGGGCTCCGTCTCGGAGCTGCTGAGCAAACCGAAGCCCTGGCACATGCTCTCCATCAAGGGCCGCGAGCCCTTCATACGCATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAGCGCCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGGCGTCGAAGCACCGGACCCAATCAGCAGGACAACAGCAGCGATACGTCCAGCAATGATACGAACGATTTCTATACGAGCAGCCCTGGACCGGGTTCGGTAGGCTCGTCGGTGGGTGGTGCACCGCCCAGCAAGAAGCAGCGTGTGCTGTTCTCCGAGGAGCAGAAGGAGGCACTGCGTCTGGCATTCGCCCTCGATCCGTATCCGAATGTGGGCACCATTGAGTTTCTGGCCAATGAGCTGAGCCTGGCCACGCGCACCATTACCAACTGGTTCCACAATCATCGCATGCGACTCAAGCAGCAGGTGCCGCACGGCCAGCCCGGCCAGGACAATCCCATACCCAGTCGCGAGAACACAAATGCGACGCCCTTCGATCCCGTCCAGTTTCGCATACTGCTGCAGCAGCGTCTCGTCGAGCTGCACAAGGAGCGCATGGGTCTCAGCGGTGCGCCCATACCCTATCCGCCGTACTTTGCAGCGGCGGCGCTGCTCGGACGCAGCCTGGCCGGCATACCGGGTGCGGCGGCAGCGGCTGGGGCAGCGGCTGCGGCAGCTGCGGCCGTGGGCGCCGCTGGCGGGGATGAGCTGCAGGCGCTGAATCAGGCCTTCAAGGAGCAGATGAGCGGTTTGGACCTGTCGATGACAACGCTGAAGCGTGAGCGCAGCGATGACTACCAGGATGAGCTCGAGCTCGATGCCAGCGGCCACAATATGAGCGACAACGAATCCGAGCCGGAGCACACGGCCCTCTCCGACTACGAGAAGGTGCTGCAGAAATCTGCACTCGCCTCGGCTGCCGCTGCTGCGGCGTACATGAGCAATGCGGCGCGCAGTTCGCGGCGCAAGCCGGCGGCACCACAGGCTCCGACTATGGTCGTGGGCGATGAGGGCGACGAGGGTGTGAAGGGTGATGCCTCGATTGCTGGCGATGCGGAGGAGCACGAGGATCAGGCACAGCTGGAGATTGAGCAGCGTTTGATGGAGCCCGAAGTGCGCATCAAGCAGGAGGAGGACGAGGATGAGGAGGAACAAACGCAGCAGCAGCAACAACACTTGGATGATGATGTTGGGGCGCCTCTGGAGAGCGATGCGGAAAAGCAGCTCAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGTGTGCGGCGCCTGAGTAGCAATGGCGATGTGGAGGAGGCGAGAGCCGCTGCCGCCGCTGTGGCAGCTGTTGCGGCTGCGACGCAGGCAGCAGCAGCGTGGAACTACTAA
Protein Sequence
MSNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKAVLAAEALKNGVSDPTIASSSDEMPQQQQAEAVVATTPKQVKDDQADAEEEEEEAEEVTATATAETSENAKETSEIETLTVEANLQPKVEIIETEDDAEIVAGQTLEEQLLLHAAAHHLHHGADSNSSSATSTPNSTAQLAASIASTLNGNKSLLQQAAAAASVVEDNNNSLTPNANAAVAAAAMAANAQHAAAFLPNLPNFPGLPFQFAAAAAVGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSDDRLALILSEATSLMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAAAAAVAVHQQREREQREQREQREQREAVQREQQQRIRHEDLAQDKMARLYQELMTRTPREAAFPGFLLSPFFGGAAGMPGAPANPFPGAMGADENMRHALEREIAKLQQQQAASFPNFSNLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLDQHSGGSSSCSKDGERNDDNNERSYPALPLPHARKSEGGNTPAPPAPPAVPTAGGNSNSSAAGANANSGGGGGGVGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPQHAISLPAAVTPGGVPSGAAGGGVGATAGSTPGSSEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMTTLKRERSDDYQDELELDASGHNMSDNESEPEHTALSDYEKVLQKSALASAAAAAAYMSNAARSSRRKPAAPQAPTMVVGDEGDEGVKGDASIAGDAEEHEDQAQLEIEQRLMEPEVRIKQEEDEDEEEQTQQQQQHLDDDVGAPLESDAEKQLKVINEEKLRLVRVRRLSSNGDVEEARAAAAAVAAVAAATQAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01323278;
90% Identity
iTF_01323278;
80% Identity
iTF_01323278;