Shsu015953.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- kn
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000002.1:9455052-9471833[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-79 1.1e-75 255.3 0.0 39 182 95 244 73 244 0.92
Sequence Information
- Coding Sequence
- ATGCATCATCACTTCGCTAGCACAGCGCCCCTGACCAGCACCGAAGGCTTCAAGCTGCGCTCCGAGGAGCCGGTGCCGGGCTTTAGCTCGGCCTCGCCATGGCCCACTTTGGAGCTGGGCATGGAGTGGGGCAGGAAGCTATATCCCACCGCCGGACCCCGATCCGCCGGTGGCCTAATGTTCAGCTTGCCACCCACGGCGGCGGATATGAATCAACCGCGCGGTCCAATGACATCCCTCAAGGAGGAACCTCTCGGCGGCAGATGGGCAATGCAACCAGTTGTGGATCAGAGCAACTTGGGCATTGGTCGCGCCCACTTTGAGAAACAGCCGCCCAGCAATTTGCGCAAGTCGAACTTCTTTCATTTTGTGATTGCGCTCTACGATCGTGCCGGACAACCCATCGAGATCGAGCGCACAGCCTTCATTGGTTTCATCGAGAAGGATTCCGAATCGGATGCGACAAAAACCAACAATGGCATCCAATATCGATTACAGTTGCTCTACGCGAATGGTGCAAGACAGGAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTATCATGCAAAGCCATCATCTATGAGGGCCAGGACAAGAATCCCGAGATGTGCCGTGTCCTTTTGACGCACGAAGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTAA
- Protein Sequence
- MHHHFASTAPLTSTEGFKLRSEEPVPGFSSASPWPTLELGMEWGRKLYPTAGPRSAGGLMFSLPPTAADMNQPRGPMTSLKEEPLGGRWAMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEXXXXXXXXXXXXXXXSLSCKAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118478;
- 90% Identity
- iTF_00476410;
- 80% Identity
- -