Shsu015954.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- kn
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000002.1:9482875-9484759[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-119 1.1e-115 387.3 0.0 205 384 1 209 1 213 0.99 2 2 8.3e-07 0.0082 14.6 17.2 424 536 216 327 209 334 0.62
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGGTCGTCATATCCACTCAGGTGGCCGTTGATGGACCACTTTTGGCTATCTCGGATAATATGTTTGTGCACAATAATTCGAAGCATGGAAGACGCGCCAAGCGATTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTACCCACCGCTGCCTGTGGCGACACCCTGTATCAAAGCGATATCACCGAGCGAGGGCTGGACAACAGGTGGCGCCACCGTCATAATTGTGGGCGACAACTTCTTTGATGGCTTACAAGTGGTTTTTGGCACAATGCTGGTGTGGAGTGAGCTGATAACATCGCATGCGATAAGGGTACAAACTCCACCCAGACACATACCGGGTGTCGTTGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGATCACCCGGTAGATTTGTCTATGTCTCAGCACTCAATGAACCCACAATCGACTACGGCTTCCAGCGACTGCAGAAGCTCATACCACGACATCCGGGCGATCCGGAGAAACTGCAAAAGGAGATTATACTGAAACGTGCAGCGGATCTTGTGGAGGCTCTATACTCCATGCCCAGCAGATCACCCGGCGGTTCCACCAGCTTCAACTCCTATGCGGGTCAGCTCGCCGTGAGCGTACAGGACGGCTCCGGCCAGTGGACAGAGGATGACTATCAGCGTGCCCAGTCGAGCAGTGTCAGTCCACGTGGCGGCTACTGCAGCAGCGCCTCCACGCCCCACAGTTCCGGTGGTTCGTATGGAGCCACGGCAACGAGCGCCAGTGTTGCAGCCACTTCGAATGGTTATGCGCCTGCACCGAATATGGGCACACTGTCCTCGTCGCCAGGCAGCGTCTTCAACTCCACATCAATGTCCGTGTCGACGCCTTGGCATTCGGCGCTTGTGCAACATCATCATGTGACCGCCGTCTCCGCCGCCACCAACCACCATCATCCGCATCATTATCCGCATCCGCACCAGCCCTGGCACAATCCGGCCTTAGCAGCAGCAACAGCGACGGCAGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATSASVAATSNGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHVTAVSAATNHHHPHHYPHPHQPWHNPALAAATATAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00530692;
- 90% Identity
- iTF_01549315;
- 80% Identity
- -