Shsu007088.1
Basic Information
- Insect
- Scaptomyza hsui
- Gene Symbol
- Atf3
- Assembly
- GCA_018152825.1
- Location
- JAECXO010000001.1:883784-891600[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-15 3.5e-12 46.3 16.6 2 65 166 229 165 229 0.98
Sequence Information
- Coding Sequence
- ATGTTCAACTCCAACATACCGGCCACAGCTCTGCTGAGCATCGAGGGCAGCGGCCTTGGGGCACACACGCCCAAAACTCCAGAGATTCTCAACTCACTGATCGCCATGTCCAATCCCTTGGACAATTACAATTTCAATGCCTCAAACTCGTGCAGTGCCGCCTCCACCCCGGTCGTAACCATACGCAATTTCTGCGGCAATCCCAACGGACAGTCACACTCGCAGGACAGCAGTCATTCCAGTTGCTCGGCATCACCGCTCGATTCACCAGCGGGCACAGCCACCACGCCCAGTGTGCAACAGACCTGTTCACAGCTGATCAAAGCGGGCCTCAAGCTGTCCATACAAAGCAAACGCAAGCTGTCCACCTGCGACTCGAGCTCAGGTTCCGAGCAGCCGAACTCGAAGTGTTCGCGCCGCGACGAGGACTGCGAGGAGTCGAGCGATGAGGACAGCGAAACGAAATCGGTGCCCAAGGGTCTGACGCCCGAGGATGAGGATCGGCGGCGGCGACGTCGCGAACGCAACAAAATTGCTGCCACCAAGTGCCGCATGAAGAAGCGCGAGCGCACCCAGAACCTGATCAAGGAGTCCGAGACGCTCGACACCCAGAATGTGGAGCTCAAGAATCAGGTGCGCTCCTTGGAAACGGATCGTCGGCGTCTCCTCGAAATGTTGCAAGCACATTCGCCCAACTGCGTCAAACGTGGCGGCTGCCAGTTGCCCTCGAAGCTGCTGCAATCGCCGGCTCTCAATCAACAAGTCTCGGACTATGTGCCGAATTGTGAGGGTCTCAGTTTGGGTCTGGGCCTCTCCGCCGTGGCCATTGCCATCCCCTCGCCCGTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGCCCACCAGCGCCATCGAGTTCGTGAAGAACGAGCTGGTGGACTCGCAGAGTCCGTACACCACAGCGTTGAGTGCGGAACGCTTCCTCTTCGACGGCTTCCCGGACATCAAGCATGCGGTCAGTGTGCATCCCAGCAGTCTCAACAACATGGCCAGTGTGGCAAGTCTGGCGGCGCACAACAACAACAACCATCTGATGGACTTTCACAACACGCTGCCGCATCATGGCAGCAACGGTGTGGGAATCGGGGTCGGGGTTGGGGTTGGGGTTGGGGTTGGGGTCGGCGTGGGCATCATGACGCCCTGCTACGAGGATGAGCAACTGTTGCTGATGAAGAACAGCTGCTATACGAACGATCTGCTCTCGCAGCTGGCGGACGATGATGCCGATTTCGTGGATCTGGATACGGGCGCCGCCGCCTTTATGACTAACGGTGGCTGCCTGGCGTGA
- Protein Sequence
- MFNSNIPATALLSIEGSGLGAHTPKTPEILNSLIAMSNPLDNYNFNASNSCSAASTPVVTIRNFCGNPNGQSHSQDSSHSSCSASPLDSPAGTATTPSVQQTCSQLIKAGLKLSIQSKRKLSTCDSSSGSEQPNSKCSRRDEDCEESSDEDSETKSVPKGLTPEDEDRRRRRRERNKIAATKCRMKKRERTQNLIKESETLDTQNVELKNQVRSLETDRRRLLEMLQAHSPNCVKRGGCQLPSKLLQSPALNQQVSDYVPNCEGLSLGLGLSAVAIAIPSPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPTSAIEFVKNELVDSQSPYTTALSAERFLFDGFPDIKHAVSVHPSSLNNMASVASLAAHNNNNHLMDFHNTLPHHGSNGVGIGVGVGVGVGVGVGVGIMTPCYEDEQLLLMKNSCYTNDLLSQLADDDADFVDLDTGAAAFMTNGGCLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01324650;
- 90% Identity
- -
- 80% Identity
- -