Sgra007770.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza graminum
Gene Symbol
nfxl1
Assembly
GCA_018901835.1
Location
JAEIFL010000107.1:336908-340095[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 1.5e+04 -8.1 6.4 15 19 149 153 148 153 0.82
2 19 0.087 6.6e+02 0.2 0.4 4 10 184 190 183 190 0.96
3 19 6.5e-08 0.0005 19.8 15.5 1 18 198 214 198 215 0.98
4 19 2 1.5e+04 -4.2 2.2 6 10 241 245 240 245 0.83
5 19 1.2e-07 0.00091 19.0 18.4 1 19 251 270 251 270 0.99
6 19 0.46 3.5e+03 -2.1 1.0 5 10 294 299 294 299 0.93
7 19 3.1e-05 0.24 11.3 13.2 1 19 305 324 305 331 0.93
8 19 0.89 6.8e+03 -3.0 0.5 1 7 348 353 347 355 0.49
9 19 1e-07 0.0008 19.2 11.8 1 18 358 375 358 376 0.96
10 19 0.7 5.3e+03 -2.7 0.4 1 5 385 389 385 394 0.73
11 19 0.022 1.7e+02 2.2 15.9 1 18 410 427 410 428 0.94
12 19 3.3e-08 0.00026 20.7 14.7 1 19 437 455 431 455 0.90
13 19 1.1 8.4e+03 -3.3 2.0 6 10 483 487 483 487 0.98
14 19 4.3e-05 0.33 10.8 7.8 9 19 500 510 498 510 0.89
15 19 0.027 2.1e+02 1.8 5.7 1 11 522 531 522 532 0.95
16 19 1.8e-05 0.14 12.0 4.1 1 11 597 607 597 608 0.96
17 19 0.013 98 2.9 12.3 3 19 637 653 636 653 0.91
18 19 1.7 1.3e+04 -3.8 1.4 8 13 658 663 657 663 0.73
19 19 6.8e-07 0.0052 16.6 11.8 1 16 704 718 704 724 0.90

Sequence Information

Coding Sequence
ATGGAAAAGTTTAATAAAGTGCAGGCAAAGAATTTGGCAGCCGCAAAGAAGCTAGTCGATGTTTATGCATCAAGTTCGGAGGATGAAGGCGAACTGGACGAAAAACATATACTAGATCTACTGTATAAGCATTATACGAAATCTTTGCCGGATAACTCGACTGCCAGCAATAATGCAAATCGTACTGCGACTTTCTTGGAGAACACGCTGCACTCGGGAGCGGCGACCTGCCTGATTTGCATTGGCAGCATCCGACGGGTGGAGGCGATTTGGTCGTGCAAGTCATGCTACTGTTTCTTCCATCTCAAGTGCATCCAGCGCTGGGCTAACGATAGCGTCATGCAAATGAAAGCCAAGGCGGAGCAGCAAAATGCTAGCCAGGGACACTACAATCATCTTGGCGAATTTGTGCCGCCAAAGCGTCCCAAATCGTTACACTGGTGCTGTCCACAATGCCGAACGGACTACCAGCCTGCGGATCGGCCCACCCAATATGAATGTTTTTGCGGCAAAGAGGTGAATCCAGAGGCACAAGCCTTTCTAGTGCCGCACTCTTGTGGCGAGCTCTGTGGCAAACTGCTGCAGCCCAAATGTGGCCATGATTGCAAGCTACTCTGCCATCCGGGTCCGTGTCCGCCATGTGCCCAACAAACACGTAGTTCGTGTTTGTGTGGCAAATCTCCGCCACGCTCGGTGCGCTGCATCGACAAGAACTGGCAATGCCAGCAATCGTGCCAAGCTTTGTTGTCGTGTGGCAAGCATAAATGCAACCAAAGATGCCATCGTCCTGGCCAGTGTCCGCCGTGCCCCAGCCAGAGCTCCCAGTACTGCGGTTGCAAACGTGAACAAAAAGTTGTCAACTGCGACGAACCCAAGTGGAAATGTCAAAATATTTGTGGCGCTTTGTTTGATTGTGGTCTGCATAGCTGCGATAAGTTGTGCCATCCTGCTCCCTGTGCCGGTGAATGTCCCTTAGGCGTTCGCAGTTGCCCGTGCGGCAAAAGCGCAAAAACTGGCGGCTGTAGCGAAGTGCTGGAAACGTGTGGCGACACCTGCCAAAAACTATTGTCCTGTGGCAAGCACAGCTGTGCCCAACGCTGCCATCGCGGTCCTTGCAACCTGTGCCTGGTGCGCACCAAGAAGCAATGCCGTTGTGGGCTGCATGAAAAGGAGCTGCCCTGCTCCAAGGACTTCAGCTGCGAAACCAAATGCAAACTGATGCGCGATTGCAACAAGCACGCCTGCAATCGCAAGTGCTGTGGCGATCAGTGTCCGCCTTGTGAGAAGATCTGCGGCAAGCAGTTGAGCTGCAACAAGCACAAGTGTCAGAGTGTGTGCCACAATGGACCATGCTATCCGTGCAAGTTGGAGTCGCAGGTCAATTGTCGCTGTGGCAAAACGCGACGCAGCGTTCCCTGTGGCAGGGAGAAGAGCGCACGTATTGTTTGCCAGGAGCTCTGTCGAATCTCGAGCAAATGTCATCATGCTATCAAGCATCGTTGCCACAAGGGCGAGTGCCCGCCATGCTCGCAGCAATGTGGCCTACCCAATGATACCAGCGGCTGTGGACACATTTGCAAGGTGCGCTGCCATGCAGCCATACGTGTGCCCAAAACACCAGATGCACTGCGTCCGCATGCCAATAAGTACGAATACCGTGCACAGCCGCATCCGCGTTGCGAGGAAGGTATAAATGTCACCTGTATTGGTGGTCATGAGGTCGTCACCTGGCCGTGCTGGAACTCTAAGCCATCGTCTTGTGCGCGCCAATGTGGTCGGCAGTTAAACTGTGGCAATCATAAGTGCACGCTGTTTTGTCATGCGGTGCCCAATCCCATGGATATGCAGCAGCAAGCGGGATGCGCTAACTGCGAGCAGGGATGCGCCTTTGCTCGTCCTGCCGGCTGTACACATGTCTGTGCCAAACGCTGTCATCTTCCTCCCTGTGCGCCATGCAGTTACGTTATCAAGAACAAGTGCCATTGCGGCCTAAATCAGATTATTTACAAGTGCAGCGAGTTCTACAACGAAGAAGGATCGGGATCGGATATCCTTGAGCGCCGACAAAAGCTGTGTAGCTGTGGCAATCGCTGTTTGAACAACTTTGCTTGCGGACATCGCTGCATGACCATTTGCCATCCCGGCCCATGTCCCAATCCTGAGATGTGTCGTAAAAAAGTGCGAATCTATTGCGAGTGCAAGCGCATCAAATTGGAGATAGCCTGTGACAAGCATCGAGCGGGTCAAACAGCTTTGGAGTGCGATGCCAAGTGCCAGGCCGAGCGCTCCAAGGTCGAAGCAACGGAGCAGCAACAATTTGAGCGCCGTTTGCGGCAGGAGGAGGAAAAGAATCGTCAAGAGCTGGAGAAATTCGAGCAAAAGTTTGGCAAGCGTAAGCCCAAGGAGCGCAAAACCATTGATGTCCACTCGACCAAATCAAACTGGATTGACTGGCAACGTTGGGCCATCTATGCAGTGGCGCTCTTTGCGGCACTAGGCGCTCTTGCCGTCGCTTACTATGCCGAGAGTTAA
Protein Sequence
MEKFNKVQAKNLAAAKKLVDVYASSSEDEGELDEKHILDLLYKHYTKSLPDNSTASNNANRTATFLENTLHSGAATCLICIGSIRRVEAIWSCKSCYCFFHLKCIQRWANDSVMQMKAKAEQQNASQGHYNHLGEFVPPKRPKSLHWCCPQCRTDYQPADRPTQYECFCGKEVNPEAQAFLVPHSCGELCGKLLQPKCGHDCKLLCHPGPCPPCAQQTRSSCLCGKSPPRSVRCIDKNWQCQQSCQALLSCGKHKCNQRCHRPGQCPPCPSQSSQYCGCKREQKVVNCDEPKWKCQNICGALFDCGLHSCDKLCHPAPCAGECPLGVRSCPCGKSAKTGGCSEVLETCGDTCQKLLSCGKHSCAQRCHRGPCNLCLVRTKKQCRCGLHEKELPCSKDFSCETKCKLMRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIVCQELCRISSKCHHAIKHRCHKGECPPCSQQCGLPNDTSGCGHICKVRCHAAIRVPKTPDALRPHANKYEYRAQPHPRCEEGINVTCIGGHEVVTWPCWNSKPSSCARQCGRQLNCGNHKCTLFCHAVPNPMDMQQQAGCANCEQGCAFARPAGCTHVCAKRCHLPPCAPCSYVIKNKCHCGLNQIIYKCSEFYNEEGSGSDILERRQKLCSCGNRCLNNFACGHRCMTICHPGPCPNPEMCRKKVRIYCECKRIKLEIACDKHRAGQTALECDAKCQAERSKVEATEQQQFERRLRQEEEKNRQELEKFEQKFGKRKPKERKTIDVHSTKSNWIDWQRWAIYAVALFAALGALAVAYYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01324578;
90% Identity
iTF_01323792;
80% Identity
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