Sgra012102.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- grn
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000277.1:10348004-10367918[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 4.4e-16 57.9 4.7 1 35 375 408 375 409 0.98 2 2 5.1e-19 1.5e-15 56.2 6.3 1 35 435 468 435 469 0.97
Sequence Information
- Coding Sequence
- ATGCCCTCCTCACATGCCACGCCCCAAGTGTGCCGGCCGCACTTTCATACGCCGCTCAGTCCCTGGCTAACCAGCGAGCACAAATCATTTGCACCCGCCAGCGCCTGGGGCATGGGTCAGTTCGCTTGCCCCCAGGAGCCGCAAGTCGAGCACAAACTGGGCCAGGTGGGCCAAAGCCATCAGACGACAGCAGCCGGCCAACACTCGTTCCCATTCCCACCAACACCGCCAAAGGACTCAACGCCCGATTCAGTACAAACCGGTCCATCCGAGTACCAGGCCGTTATGAACGCTTTTATGCATCAGCAGGCAACGGGCTCTACCTCACTGACGGACGCCAGTTGTGCGCTGGACATTAAGCCCTCGATACAGAATGGTGGCGCCTCTGTGGCGCATGCTGTCAGCGCTGGACCTGCGCAATCCTCGGCGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGGCGGCTGTGGCTGCCGCCAATATGTTCCAAAGTTCCTCGGTGGCAGCAGCGGCTGTGCGGCATAGCATGGGTGCTGCAGCGGCGGCAGCGGCGCATCATCACCATCATCATCATCACAGTCATGGCCATCATTCCGCCGGCTCTGGCTCGGGCTCCGGCTCGGGTCTGCATGGTGGTGGCGGCGTTGGCGTTGGTGGTGGTAGTGGTGTTGGTGCTGGTGGCATTGGTGGCATGAGCGGTATGGGTGCGATGAGCAGTGGTGGTCATAGCAGTTCCAGTGGTGCCGGCGGCGGTGGCGGAGGTGCTGGCGCTGTTGGTGGCCTCGATGTGAAGCCCGTGCGCACAAAACCCCGGACAAGTGCTGAGGGACGCGAATGCGTTAACTGTGGTGCAACCTCAACACCACTGTGGCGACGCGATGGAACTGGACATTATCTGTGCAATGCGTGTGGACTTTACTACAAAATGAACGGACAAAATCGACCCTTGATTAAGCCAAAGCGAAGATTGACATTACAATCGTTGCAAAGTGCGGCTAAAAGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACAACAACCCTTTGGCGGCGCAATGCCAGCGGTGAGCCCGTTTGCAATGCCTGCGGATTATACTACAAGCTGCACAATGTCAATCGTCCACTGACTATGAAAAAGGAGGGCATCCAGACGCGTAATCGCAAGCTCAGCTCGAAGTCGAAGAAGAAAAAGGGTCTGGGCGGTGGCTGTCTGCCAATGGGTGGCCATCTGGGCATGGGTGACTTTAAGCCGCTCGATCCGTCCAAGGGTTTTGGCGGCGGCTTCTCGGCATCGATGGCACAACATGGACACCTTTCCAGTGGACTGCATCCGGCACATGCGCATATGCATGGCAGTTGGTATACCGGCGGCATGGGAGCATTGGGTGCCTCCGGTGGACTGCAGGGTGGCTTCTCCACAGCTGGTTCGCTGGGCGGCGGTGTTGTGCCACACTCGCAGCCCTACCATTTGGGTCTTAGCTCAATGGGCACTTGGCGGACTGACTATACGTGA
- Protein Sequence
- MPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMGQFACPQEPQVEHKLGQVGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGGASVAHAVSAGPAQSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAHHHHHHHHSHGHHSAGSGSGSGSGLHGGGGVGVGGGSGVGAGGIGGMSGMGAMSSGGHSSSSGAGGGGGGAGAVGGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00549925;
- 90% Identity
- iTF_01324554;
- 80% Identity
- -