Sgra009836.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- crm
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000001.1:15173880-15177798[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-07 0.00019 21.3 0.1 2 44 119 174 118 176 0.95 2 2 8.7 8.3e+03 -3.2 0.0 9 24 298 313 297 314 0.88
Sequence Information
- Coding Sequence
- ATGGAAGACAACGGCAGCATGTGTAAAAATGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCTAATGAACCGCCAGAGGAGCTGCTCGGCTCGGTGACGTCGCAGAATTGCCCGGGGACACGGGCAAGTGCGCGTGTCATACAAAAAATGAAGCTAGATCAAACGCGTCCAATGACACCGCCGCCAGCGGAACGTGAACCGAGTAAAAAGGATGAGAAGGCTGCCCAAAAGACGCCGTCACAGATGCGTGCCGCCAACAAAACAACCTGGACAAATGTCGAGCGCAATTGTTTCTTTGATGCACTCAACGAGGTTGGCAAGGATTTCGAGACAATGGCCAATTGCATCAATACCAAATTGAAGCGTCGCAACACCAGCAACGATCATAGCTTCAAAACCAAGGAACAAGTGCGTCAGCATTATTATCAAACATATCACAAAATTGGCAAATATGTCCGCTTCTCCGATGAGCTTCGAAAACCCGCTCAGGAACTGTACACGCTGATTAATTATGGTGAAATGCGTCGTAAGCTGCAGTTTCTAACCGAAAAGCATTTCATGAAGCTGAAGCAGCTCATCTATCAGGGTCACATCACAGTGCGCTGCAAGGGGAAAAATATACGCATTAAGACGCCCTCCTGCAAGGCATTGCGTCGTCTCAATCAGCTCGATGATACATTGGAGGACATACGATTGCCCACAAAAATTGAGGTGCTTGTGAATCCCGCCAATATGGAAGCATTTGGACGCGTTCAGTCGTTGGCCCAGAATCCACGTATACGTGCCACAGTGCCGCTGCACAAGAAGCTGATGAGCTTCATACAAACATTTCAGTACAAATGGCGTAGCAATGATGCACGTTTGGCGGAAAGGCAACAGCAGCTGCTCAACGGCGTTGGATCTGGTGGTACAGATTCTCCCGCCGCTGAAACAGTTCCAGCAAATGAGCTGGTAACTCTCTGTTTCTTGCCCAAGCCCGGTGTTGCCATACATCGTCCATTGCTGAGCATAACGGCGCATCTGAGCAACGTCAACATCTGCCTCTCAGCCTACGAAGAGCGTCTGGGCGTCAAGGTGCGCAGCGAGACGCTCGATAGTACGGCGGCAGCGGCTGCTGCCAGCGCCAAGCGTGCGCGCACCGAAAGCGGTTCAGAGAAACGTTCGCCCGAAGCTAAAAAGCTAAAGCCACTGTCAGCAGCCGTTGCCGGTGCAGTGCCGGATAAATCCCACCCCAACGAACTGATCAATGAAGGCAACGGCAGCGGCAGCAATCTTGTTAAGATGGAAAGCAGCAGCGGCGATGAGCTGGGCGACGATCTAATCGAGCTGCTTAATCTAACAATCAATGGCGGTGATACAATTGCATCGGTCGTAGCACCACCAGCACCACAACCCACAGCAACAACACCCGGAGCAGCACAGACGGCACCGGCGCCACCCTCACGTGGCAAACGAAGCGAAGCTCTTGGCACTGCCGGTGGCAAGGTGGGCAAAGCGAATGCAGCCGCACGCAACTTTCGACCACTGCTCAGCGATGATGTGATCAAACGCATGCGCAAGGGCTGGACAATATCGAATGCGGCGGACATAACCATTGGTGATTTGTATGTGGTGCTGGGGCAGGATTCCAAGCTGGAGCTCGATTACTATTGGTGCGATGTTGAGCTAAGCACGCCGAGCAGCACGTCTGTTGCCAGTGGCAATACTATTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGAACGCGTCAGGGCCATCACAACTTCCACGGTTAGCAATAAGCTCAAGCATCTCCTGCTCATCTCGAGCCTGAGCGAACGTGTACGCAAGCGTCAATGCAGTTGTGGCCATAGCTGTGATCGCAAGACCAAGGCACAGTGGATGAGCAGTTTGGCTGGCCAGCAGCCGGCGGCAGCAGCTGCAGCTTCTGCTGCTGCGACATCAACAGCAATCGCTGCGGCATCCAACGATGGCAACGAGATTGTTTTCCGCACACCCATGCTTCCAGTGCGTCGACCCATGGTCAATATCATTGATCCAAGTCGACAGTTGTCAAAGCTTACGCGTCAAAAGATGTCGCGTCAGGTGCTGGTGCAACGTCTACTACAGCCGCCAGATTCTGGATCTCAATCTTATGATTTGCTGAATTTACAAAATGGTCTCTTTGAGCCCATTGAACGTGTCAGCATAAGCAACAACAACAACAATAATAACAGTAATAATAACAACCTCAACAGCAACAGAATAAATACTGCGATCCTCCCACGAACTGTATCTTCCAAAAATACCTCCAAAACCATCTCGAAAAGCGCCTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTGGATATGCCCAGTTTAGATATGCCCAGTTTGGATTTGGTTGCAGCGACGCCAACGGCTGCGACAGCCACAAGTCAAATTGCATCCACCACGTTGCCGGAGGGCGTTCAAGATGAGAGCACCATGAATAGCTTGTTCAATGGCAATGTCAGTCCAAATCATTTGTTACGCGATTCCACATCGAATGCCCGCTGGCTGGAGGAGAACATTAATGACTTTTCGCTGACCAGCCTGCTGGGTCATCTGGATGATTTTGATGCCACACGTGACATACTGAATCCATCATCAAGTCTGTCGGTGATAAGCGAGACGAGTGTCGATTATCGTCACAAGTTTCAAGAGATTTCGGCGCTGCTGCAACAGCAGGAAAAGGATTAG
- Protein Sequence
- MEDNGSMCKNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANEPPEELLGSVTSQNCPGTRASARVIQKMKLDQTRPMTPPPAEREPSKKDEKAAQKTPSQMRAANKTTWTNVERNCFFDALNEVGKDFETMANCINTKLKRRNTSNDHSFKTKEQVRQHYYQTYHKIGKYVRFSDELRKPAQELYTLINYGEMRRKLQFLTEKHFMKLKQLIYQGHITVRCKGKNIRIKTPSCKALRRLNQLDDTLEDIRLPTKIEVLVNPANMEAFGRVQSLAQNPRIRATVPLHKKLMSFIQTFQYKWRSNDARLAERQQQLLNGVGSGGTDSPAAETVPANELVTLCFLPKPGVAIHRPLLSITAHLSNVNICLSAYEERLGVKVRSETLDSTAAAAAASAKRARTESGSEKRSPEAKKLKPLSAAVAGAVPDKSHPNELINEGNGSGSNLVKMESSSGDELGDDLIELLNLTINGGDTIASVVAPPAPQPTATTPGAAQTAPAPPSRGKRSEALGTAGGKVGKANAAARNFRPLLSDDVIKRMRKGWTISNAADITIGDLYVVLGQDSKLELDYYWCDVELSTPSSTSVASGNTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVERVRAITTSTVSNKLKHLLLISSLSERVRKRQCSCGHSCDRKTKAQWMSSLAGQQPAAAAAASAAATSTAIAAASNDGNEIVFRTPMLPVRRPMVNIIDPSRQLSKLTRQKMSRQVLVQRLLQPPDSGSQSYDLLNLQNGLFEPIERVSISNNNNNNNSNNNNLNSNRINTAILPRTVSSKNTSKTISKSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDMPSLDMPSLDLVAATPTAATATSQIASTTLPEGVQDESTMNSLFNGNVSPNHLLRDSTSNARWLEENINDFSLTSLLGHLDDFDATRDILNPSSSLSVISETSVDYRHKFQEISALLQQQEKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -