Sgra004868.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- -
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000290.1:5878377-5880632[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3 2.9e+03 -1.7 0.0 3 18 136 151 134 152 0.88 2 5 6.4e-11 6.1e-08 32.4 0.1 1 41 228 269 228 274 0.91 3 5 5.9e-05 0.056 13.3 0.0 3 41 285 327 283 331 0.78 4 5 3.6e-07 0.00035 20.4 0.0 3 46 340 384 338 384 0.93 5 5 1.5e-11 1.4e-08 34.4 0.1 3 43 392 433 390 436 0.95
Sequence Information
- Coding Sequence
- ATGTGCGATCTTTTTAACAAAGAGCAGGAGCACCACCAGCAATTGCAGGAATTGGCATCGCTTATATCTGCCACCGCCAAAGGCGATGTAGACGCCCTAAAACTTAATCAGGCGCTTCAGCAGAGCCTTGAACAGTTTCGTCAACAGTCGCTGGAGCTGCTGCAGAAAGTGCGAGAGCGTTATAAACGTAACGAGGAGATACTCATAGCCCGACAAAACGCGCGCTATGACAACAATGAAGTCGTTGGATTGAGCGGTGCTGTGCTCCGCGGGGGAACGTTTCGATTTAAGGGTAATTTGTATTTTCGTGATGCGGACGGACGGAGCTGTCCCAACAATGAGGATTACGAGAAGCGCTGCGCCAACGAAATGTTTCCCACCGATTTTGATATGCGCTCCAAGCACGTCTGGACGGTAATGGACAAGAAAAACATTATTATGGGTGTTAAGCAACAGCTTTTGGATCATGCCGAATTCCGACCACAAAGCAGCTCAAATGGCAGGAAACGCAAGCGCAAGCCCATCGATATGCATCAGCATTCGGTGGCTGACTTGCTAAGCGTTGCGGACCGCAACTTTAGCATCGATTGGATTCAAATAAGCATACTGGACGTGGAATATCGTCACTCAGCATACAGCTGTGAAGCTATGTGGCTTGTGTATTTGCAGCCGCATATCAAGCGCGATGATTGGACAGACGAGGAGGATCAGATTCTGCTGGCAGCCGCCAAGGAAAACAAGATGCAAAATTGGATAGCGATTGCTGCTAAAGTGGAAAGGCGTTCGGACTATCAGTGCTTCGTGCGCATGCAGACAACGCTGCGCAACAGTCAAGACGTAACGCACGCCACAAAATGGTGCTCCCAGGATAGCGAGCGTTTATGTGCACTTGTCTTGAAGAACACGGTAAATGGCAATGTCAATTGGTCAGAAGTGGCCGAACACTTTCCAAACAGATCGCGATCCACACTAATTGGTCGCTATGTATATAGTCTAAATCCGAATATCAGTCACGCACCCTTCACCAATGAAGAGGATGTCATGCTGTTTGCTGCCGTCAATGAATATGCTGGCAAGTTCCATTGCATTCCGCGCACTCTATTTCCAAATCGCTCACTGGCCCAGCTGCGCGCACGCTATAAGAATGTGCTGACACAGCGTAACAAAACTGATTCCTGGTCGGTAAAGGATGATGAAAATCTAATGGCTTTCGTTGCCAAACACGGCACCTCGCAGTGGGTAAAATGCGCTAATCATTTGGGAAATCATACGCGCACCAGCTGTCGCACACGCTTTTTGGTCATCAAGCGGTTTTTGGAGAAGCATCCAAATTCAACGGAAGCGGATTTACCACGGCGCAAGTCGCGCAAAAATGATTTGATTAATACTGAAAATTGGGAGATATGTTTGCAAGAAATGCAAGATCCAGATCAAAAGTTGGAAAACGAAACGTTGGCAGACTCACCATACAGCAAGAATCCTTCAATTAAAGAACAAAATTATGGAAATTGGGATATACGTTCACAGGACTCAATGCCGTTAGTCCATAAGAATTTGTGCAAATCGGATTATGCCATGTATGAGTCCTTCATGTACGCCTATAATCTCAACCTGAGATCGCCTGCAATGCCAACATCACCTCTACAAAACAAAAATAATTTTTACGATGTGGCTTATGCGTTGCGTTTTAAGTCACCCGGTGGTAAACGCATACTCATAAGAGGTGCTTGTCTACCCTCTGAGCTGCAACGCTACTATAACAAAGTGCTCCTTCAATTGCCAGCGTGTGGAGAAAGTGAGCCGTCGACAAAGTTGCTGCCGCCCAATTGGTCCACAATGATGGGATTTCGGGCCCTGTGCATATTGTCAATGCGAACTCCCATTGCTGCTAATAATGTATTGGAGTCCGAAAATAGTTTCGATGAATCTCAGCCAGAATTGCAACTGTTTCGACAACGTTTGCGCACACTCTTTTATCGAACGACCCTATTGAGCCGCCTGGAGGTCACATCGTTCAAGGAGCTCCCAAACGTATTAATGAAACTGCCCGGTTCTATTGTAAAAGATGTCTCGGCATACGATTCAGAGTCAGATGACGGTGATGAACTAACACAAATGTAG
- Protein Sequence
- MCDLFNKEQEHHQQLQELASLISATAKGDVDALKLNQALQQSLEQFRQQSLELLQKVRERYKRNEEILIARQNARYDNNEVVGLSGAVLRGGTFRFKGNLYFRDADGRSCPNNEDYEKRCANEMFPTDFDMRSKHVWTVMDKKNIIMGVKQQLLDHAEFRPQSSSNGRKRKRKPIDMHQHSVADLLSVADRNFSIDWIQISILDVEYRHSAYSCEAMWLVYLQPHIKRDDWTDEEDQILLAAAKENKMQNWIAIAAKVERRSDYQCFVRMQTTLRNSQDVTHATKWCSQDSERLCALVLKNTVNGNVNWSEVAEHFPNRSRSTLIGRYVYSLNPNISHAPFTNEEDVMLFAAVNEYAGKFHCIPRTLFPNRSLAQLRARYKNVLTQRNKTDSWSVKDDENLMAFVAKHGTSQWVKCANHLGNHTRTSCRTRFLVIKRFLEKHPNSTEADLPRRKSRKNDLINTENWEICLQEMQDPDQKLENETLADSPYSKNPSIKEQNYGNWDIRSQDSMPLVHKNLCKSDYAMYESFMYAYNLNLRSPAMPTSPLQNKNNFYDVAYALRFKSPGGKRILIRGACLPSELQRYYNKVLLQLPACGESEPSTKLLPPNWSTMMGFRALCILSMRTPIAANNVLESENSFDESQPELQLFRQRLRTLFYRTTLLSRLEVTSFKELPNVLMKLPGSIVKDVSAYDSESDDGDELTQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01324037;
- 90% Identity
- -
- 80% Identity
- -