Sgra008927.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- ct
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000001.1:7855617-7891886[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4e-27 3.3e-23 81.2 0.0 3 72 388 458 386 463 0.95 2 3 4.6e-32 3.5e-28 97.2 0.0 3 77 882 957 880 959 0.96 3 3 2.8e-31 2.1e-27 94.7 0.0 3 76 1165 1239 1163 1242 0.96
Sequence Information
- Coding Sequence
- ATGCGGCAGCATCAGCTTCTACCATCCCGCCATGCCGACATGCCGCCATTCCTAATGCGTATTCCTATTTCTAGTTCCCGTTCGAAACCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTGGCCAACACAAACACACCGTCGCCATCGCCGCCGTTGCTGAGCGCTGAGCAACAGCAACAGTTGCAGAGCAGCCTGCAGAACGGCGTCGGCGGCGCCTGCTTAAATCCAAAGCTCTTCTTCAATCACGCACAGCAAATGATGATGGAAGCGGCAGCGGCTGCTGCGGCTGCGGCGGCAGCAGCGGCAGCACAACAGCAACAGCAGCAACAATCGCCAATGCATTCGCCCATTGCTGCCACCAACAACAGCAACCCACAAGCAATAGCAGCAGCAGCAGGAGCCACACAACAACAATTGACACGCGATGTTGCTGCGCCAACAGCAAGTAAGCATCATACCACCATCAACGCATTCATCGCTGACAAGCGTAACAGTCCATTGGATCTGAATGTGCTCAGTCCACATTCGGCTATTGCCACAGCTGCAGCGGCAGCAGCAGCCGCAGCCTGCGCCAACAATCCCAATAAATTCCAGGCGCTGCTATTGGAACGCACCAAAGCCGCACTGGCCGCCGAGGCGCTCAAGAATGGCGCCAGTGATCCAACAAATGCCAGCAGCGATGCGCACCATCTGCATCATGGCGCCGACTCCAATTCATCCAGCGCCACAAGTACACCCAACAGCACCGCACAGCTAGCGGCAAGCATTGCAAGCACACTGAATGGCAACAAGTCGCTGTTGCAGCAGGCAGCAGCCGCTGCCAGTGTGGAGGACAACAATAACAGTTTGACACCAAATGCAAATGCTGCTGTTGCCGCTGCAGCGATGGCTGCCAATGCACAGCATGCGGCCGCCTTTTTGCCCAATCTACCCAATCTGCCCAATTTTCCCAGCCTGCCAGCGTTTCAGTTTGCGGCCGCAGCTGCCGCTGGCCAGGAAGCGCGAGCACATTTTCGATTCGCCGATGCCGAGTTGCAACTGCAACCGGGCGTCTCGATGGCCGGCCGTTTGGGTGAATCGCTGATACCCAAAGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGCTATAACATGGACAAGTATTCGAATCAGGCTCTGGACACACTCCATATATCGCGACGTGTTCGCGAATTGCTGTCCGTGCATAATATTGGCCAGCGATTGTTTGCCAAATATATTTTGGGTCTGTCGCAGGGCACCGTCTCGGAGCTGTTGAGCAAGCCAAAGCCCTGGGACAAGCTGACCGAGAAGGGTCGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCTGTCATGCTCCTCAAATCCCTCATACCCAAAAAAGATTCAGGACTGCCACAGTACGCTGGACGCGGCGCTGGTGGCGATGATTCCATGTCCGACGATCGCCTCGCACACATTCTCAGCGAGGCCTCCTCCCTTATGAAGAGCAGCGCAGTTGCCGCACAACAGCAGCAGCAGGAGCATCAGCGTCGCCATATGGGCGACGATACGCATAGCAATGAGGACAGCAAGTCGCCGCCACAAAGCTGCAGCTCCCCCTTCTACAAGGTTGATCAGCAGATCAAGCATCTGCAGCCGCAGCAGCAGCAACAGTTGCAACATGTCTCGGAGCATGCGCAACGCGAACAGCGTGAAGCAGCCGCCGCTGCCGCCGCCGTTGCCGTACATCAGCAGCAGCAGCAACAACGGGAGCAACGCGAGCAGCGAGAACAGCGTGAACAGCGAGAAGCAGCGCAGCGGGAACAGCAGCAACGCATTCGTCACGAGGATCTGGCACAGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACACGCACGCCCCGTGAGGCAGCATTTCCAGGGTTTTTGTTGTCACCATTCTTTGGTGGGGCGGCTGGCATGCCTGGAGCACCCGCCAATCCATTCCCAACAGCAATGGCCGCCGATGAGAATATGCGTCATGCCTTGGAGCGCGAAATAGCCAAGCTGCAACAGCAGCAGGCACAGCAGGCGCAACAGGCAGCGGGCTTTCCCAACTTTTCCAGTTTGATGGCACTGCAACAGCAGGTGCTCAACGGTGCACAGGATCTATCGCTGGCCAGCAAAGATATCAAGCTGAATGGCCAGCGTTCATCACTCAACGATCAGCACAGTGGCGGCAGCAGCAGCTGCTCCAAGGATGGCGAGCGTGGCGACGACAACGATCGCAGCAGCTATCCAGTCCTGCCACATGCCCGCAAATCGGAGGGCGGCAACACACCAGCACCGCCAGCACCACCAGCATTAGCCACTGCTGGCGGCAATAGCAATTCAAGTGCTGCTGGCATCAGCGTTGCCACTGGTGGTCATGGCAGCAATTCAGCAGCACCCAGTCCACTTAGCAACTCGATACTGCCGCCAGCATTGAGCAATCAGGGTGAGGAGTTTGCGGCAACGGCCAGTCCACTGCAGCGTATGGCATCGATAACCAATTCGTTGATCACCCAGCCGCCGGTGACGCCGCACCACTCACAGCCACAGCGGCCGACGAAGGCGGTGTTGCCACCAATTACACAGCAGCAGTTCGATATGTTCAACAATCTCAACACCGAGGATATTGTGCGGCGAGTGAAGGAGGCGCTCTCACAGTACAGCATCTCGCAGCGTTTGTTTGGTGAGTCAGTTCTGGGTTTGTCGCAGGGTTCGGTGTCGGATCTGTTGGCGCGACCCAAGCCCTGGCACATGCTTACGCAGAAGGGACGCGAACCGTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCTGTACATAAGCTGGTCGCCAGCCAGTATAAGATTGCGCCCGAGAAACTGATGCGCACCGGCAGCTACAGCGGCAGTCCACAGATGCCGCAGGGCTTGGCCAGTAAAATGCAGGCCACTCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCCGGTCAGGCCCAGCATATAATGCAACAGATGCAAGCAGCCGCTGCCATGTCGGCAGCAATGCAACAACAACAGCAGGCAGCTGCCGCTCAAGCGGCTGCGGTGCAACAGGCCCAGGCCCAGGCTCAGGCACAAGCCAGTCAGCATCAGCAGGCCCAACAGCATCAGCAGGCACAGCAGCAGGCGCAGGCCCAGGCTCAGGCCCAGGCCCAAGCCCAATTGTTGCATCATCAGAATATGCTGCTGACATCGCCAGGTTTGCCGCCCCAACATGCCATTAGCTTGCCGGCAGCGGTGACGCCCAGTGGCATACAGAGTGTTGCTGTTAACGCCGCAGTTGGTGCTGGCAGCACGCCCCTCAGCAATGAGAAGAAGCCGATGATGATGCCAGTGATGGGTGGCGCACATGCACCAAATGCAATGCGCAGTCTGCATCAGCATATGTCGCCGACGGTTTATGAGATGGCTGCACTGACCCAAGATCTGGATACGCATGATATCACAACGAAAATTAAGGAGGCTCTGTTAGCCAACAACATTGGCCAGAAGATCTTTGGTGAGGCAGTGTTGGGCTTGTCGCAGGGCTCCGTGTCGGAGCTGCTTAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGCCGTGAGCCCTTCATACGCATGCAGCTGTGGCTCAGCGATGCCAACAATGTGGAGCGACTGCAGCTGCTGAAGAACGAACGGCGGGAGGCGAGCAAGCGGCGTCGTAGCACTGGACCCAATCAGCAGGACAACAGCAGTGATACGTCCAGCAATGATACAAACGATTTCTATACGAGCAGCCCTGGACCGGGTTCGGTAGGTTCATCGGTGGGTGGTGCACCGCCCAGCAAGAAGCAGCGTGTGCTCTTCTCCGAGGAGCAGAAGGAGGCACTGCGCTTGGCCTTTGCACTTGATCCATATCCCAATGTTGGCACCATCGAGTTTCTGGCCAACGAACTGAGTTTAGCAACGCGAACCATCACCAACTGGTTCCACAATCATCGCATGCGACTCAAGCAGCAGGTGCCACACGGCCAGCCCGGACACGACAATCCCATACCCAGTCGCGAGAACACAAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCATACTTCTGCAGCAGCGTCTCGTCGAGCTGCACAAGGAGCGCATGGGTTTGAGTGGTGCGCCCATACCATACCCACCGTATTTTGCAGCGGCAGCTTTACTCGGACGCAGCCTGGCTGGGATACCGGGTGCGGCAGCGGCGGCTGGTGCTGCGGCTGCGGCGGCTGCTGCAGTGGGCGCTGCCGGCGGCGATGAACTGCAAGCATTAAATCAGGCATTCAAGGAGCAGATGAGCGGTTTGGATTTGTCGATGACAACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGATGAGCTCGAGCTAGACGCCAGCGGGCACAATATGAGCGACAACGAATCGCTCGAGGGTGGCGCCCACGAGCCGGAGCACACGCCCCTTTCCGATTATGAGAAGGCGCTGCAGAATTCGGCACTTGCCTCGGCGGCCGCAGCTGCTGCGTATATGAGCAATGCGGCGCGCAGTTCACGTCGCAAACCGGCGGCACCACAGTGGGTCAATCCGGCGGGTGCCACAACACCAACGGCGGCAGCAGCAGCAGCAGCTGGCGTGGTTGCCAATAACGTTGCCCTTGACGGCACGAGCAGCGGCAGTGAGCGCATTATCAATGGCGTCTGTGTCATGCAGGCCTCCGACTACATTCGTGAAGAGGGCGTCGACGAGGGTGTCAAGGGTGATGCGTCTGCCGATGCTGCTGATGCGGAGCACGAGGATCATGCTCAACTGGAGGAGATTGAGCAGCGTTTAATGGAGCCCGAGGTGCGCATCAAGCAGGAGGAGGATGACGAGGAGGTGGAACAAACGCAGCAGCAGCAGTTAGATGATGGCGTGCCTCCTCTGGAGAGCGATGCGGAAAAGCAGCTCAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGTGTGCGGCGCCTCAGTAGCAATGGCGATGCCGATGAAGCGAGGGCAGCAGCAGCAGCTGTAGCAGCTGTTGCGGCAGCGACGCAGGCAGCAGCAGCGTGGAACTACTAA
- Protein Sequence
- MRQHQLLPSRHADMPPFLMRIPISSSRSKPAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAQQQQQQQSPMHSPIAATNNSNPQAIAAAAGATQQQLTRDVAAPTASKHHTTINAFIADKRNSPLDLNVLSPHSAIATAAAAAAAAACANNPNKFQALLLERTKAALAAEALKNGASDPTNASSDAHHLHHGADSNSSSATSTPNSTAQLAASIASTLNGNKSLLQQAAAAASVEDNNNSLTPNANAAVAAAAMAANAQHAAAFLPNLPNLPNFPSLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYSNQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSDDRLAHILSEASSLMKSSAVAAQQQQQEHQRRHMGDDTHSNEDSKSPPQSCSSPFYKVDQQIKHLQPQQQQQLQHVSEHAQREQREAAAAAAAVAVHQQQQQQREQREQREQREQREAAQREQQQRIRHEDLAQDKMARLYQELMTRTPREAAFPGFLLSPFFGGAAGMPGAPANPFPTAMAADENMRHALEREIAKLQQQQAQQAQQAAGFPNFSSLMALQQQVLNGAQDLSLASKDIKLNGQRSSLNDQHSGGSSSCSKDGERGDDNDRSSYPVLPHARKSEGGNTPAPPAPPALATAGGNSNSSAAGISVATGGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQATLPMQKMMNELKLQEPGQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQASQHQQAQQHQQAQQQAQAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSVAVNAAVGAGSTPLSNEKKPMMMPVMGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGHDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMTTLKRERSDDYQDELELDASGHNMSDNESLEGGAHEPEHTPLSDYEKALQNSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGATTPTAAAAAAAGVVANNVALDGTSSGSERIINGVCVMQASDYIREEGVDEGVKGDASADAADAEHEDHAQLEEIEQRLMEPEVRIKQEEDDEEVEQTQQQQLDDGVPPLESDAEKQLKVINEEKLRLVRVRRLSSNGDADEARAAAAAVAAVAAATQAAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01322541;
- 90% Identity
- iTF_01322541;
- 80% Identity
- iTF_01322541;