Sgra001986.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- kn
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000132.1:12868914-12874027[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-139 5e-135 450.8 0.0 182 384 66 297 30 301 0.96 2 2 1.2e-06 0.0095 14.0 16.4 424 521 304 400 297 425 0.56
Sequence Information
- Coding Sequence
- ATGAATGACCAATTATGCAGTTCGTTGGGTCTACGTGCTTCAGATGCCAATTGGGCATCAATGAGCTGGCCAATTGAACTGGCGGCCATGGCCCAAAGTGTCATGTGCGAGGAGCGTTTGATGATGCGTAGCTTTTCATTAAATGAAAATTTTCGCGTCGCTGGCAGTGAAAACAGCATCAAGACAAAGGAGACGAGCTTTTTTCTCAAATTCTTTTTGAAGTGCAATCAAAATTGCTTGAAAAATGCTGGCAATCCGCGGGACATGAGAAGATTTCAGGTCGTCATATCCACCCAAGTGGCCGTTGATGGACCACTTTTAGCCATCTCGGATAATATGTTTGTGCATAATAATTCGAAGCATGGAAGACGCGCCAAACGTTTGGACACAACGGAAGGTACAGGCAACCAATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTACCCACCGCTGCCTGTGGCGACACCCTGTATCAAAGCGATATCACCTAGCGAAGGCTGGACAACAGGTGGCGCCACCGTTATAATAGTCGGCGACAACTTCTTCGACGGCTTACAAGTGGTATTTGGCACAATGCTGGTGTGGAGCGAGCTAATAACATCGCATGCGATAAGGGTGCAAACACCGCCCAGACATATACCGGGTGTCGTTGAGGTAACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGATCGCCCGGTCGATTCGTCTATGTCTCAGCACTCAATGAACCCACAATCGACTATGGCTTCCAGCGACTGCAGAAGCTCATACCACGACATCCCGGCGATCCGGAGAAGCTGCAAAAGGAGATTATACTGAAACGTGCAGCGGATCTTGTTGAGGCACTCTACTCCATGCCCAGCAGATCACCCGGCGGCTCGACCAGCTTCAACTCCTACGCGGGTCAGTTGGCGGTGAGCGTACAAGATGGCTCTGGCCAGTGGACCGAGGACGATTATCAGCGTGCCCAGTCAAGCAGTGTTAGTCCACGTGGCGGCTATTGCAGCAGCGCCTCAACGCCCCACAGTTCGGGCGGCTCGTATGGGGCAACAGCAACTACCGCGAGCGTTGCAGCCACTTCGAATGGCTATGCGCCTGCACCGAATATGGGTACGCTATCCTCATCGCCGGGCAGCGTCTTTAACTCAACATCAATGTCCGTGTCGACGCCATGGCATTCGGCGCTGGTGCAGCATCATCATGTGACCGCCACAACCGCCACCAGCCATCATCATCATCCGCATCATCATTATCCGCATCCGATTCAGCCCTGGCACAATCCAGCCGTAACAGCAGCAACAGCGGCGGCAGTTTAA
- Protein Sequence
- MNDQLCSSLGLRASDANWASMSWPIELAAMAQSVMCEERLMMRSFSLNENFRVAGSENSIKTKETSFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNQSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAATSNGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHVTATTATSHHHHPHHHYPHPIQPWHNPAVTAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00521135;
- 90% Identity
- iTF_00510322;
- 80% Identity
- -