Sgra002454.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- Arid2
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000132.1:16409273-16414524[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-24 3.4e-21 75.2 0.0 2 89 84 170 83 170 0.94
Sequence Information
- Coding Sequence
- ATGACATCGATTGATAGCGTACGCGTGCTGCTGCAGTCTCTGCCAGCAGCATCTCCGGCCGTCGTCGCCGCCAACAACAACAACAGCAGCAACGCCGCACTACAAAATGAGTTAACGCCGGCAAAATATGTCGCTGCTGCAGCGACTCCATTGCGCGCGAGAAATACACAAGTGCAACAACAATTGATTTTTGGCACGCCCCAAAAGGCAACAATTGAGGACGCCACAGAGAGCAAGGAACCCAATCCGCCCGAGCAATTTTGGCGTGATTTGCATCAGTTTCACGAGCGACGCGGCACACCGCTTACGCAGGCAGCGAAGATAAATGGACAACATGTCGATTTGTATAGATTGTACAAGGAGGTGACTGACCGCGGTGGCTTCGGCAAGGTCAACATGCGTGATGAGTGGGATGAGGTGTACAGCGCACTGGACACGCTGCGGGAACGCTGTGTCAACGGCACCGCTGGCATCAAGCATATCTATCGACGCTATCTTGACAAATACGAGCGTCTTAACTTTCTGGGCGAGGATCCGGATAAAATGGAGAACTTGGAAGCGGCCATTGAATGTGCGGATTTGGGAGCAAGTGCCAGTCGGTCGCGTTCACGTGCCATAATTGGCGCTGGCGGCGGCAGCCTAATTGGCAGCGGCTTGATTGTCAGCGGCGTGATGGGCGGATCGATTAATTCCACTCTAACCGCTGTGCCCATGTCATATAATCAGCGTCAGCATATAGTGAATGCCGAACGCCGGCGGCAGCACAAAATGTCCACACAGCTGCACAAGCATAGCAGCTATGAGAAGCTGCTGCTGTCCCTAATCTCACCGCTGCCCAACGAGCAGGACTTTGCCATCAATGTGTGCACCCTGATGGCGAATGAGCCGCGTCCCACATTACAGCTCGCCGAGTGCCCCAAGCTGCTGGATGTTTTGTTGGCACATCTTGGCGTCTATGCCGATTACACGATGCGCCAACTATTCCAGCATGGTCACAATAATACCGGGCTGCAGGTGCGCAAACACTCAAAGCTCAATTTCTGGCGGGATTTGCTGTACGATAAGCCACAAATCTTGGACCTCTATACGGATGAACAAGCCTGGCTGGACAATGGCCTAATCAACAAGGAGAGCTGCGACGACGACGGCGATGCTTACTTTCAGTCCGATGAACTTGATTTCGAGCTGGACTTTTTGAATCTGCGTCGCAGTCATGGCACCGACGAGCGCATCGGCCAGCGTGTCCTACAAATCGTCCAGTTGGTGCGCAGCCTGAGTTTTCATCAGGACAATGTAACGCTGCTCGCCTCCAACCGCACGCTCTGGCGCTATCTGGTCATGGGCGCCAATGTTCGTTGGAGCAACATTCATATTCAGGCATTGGAAACGGCGGGCAATCTGGCGCAACAGTTTGAGCTGTTGGATCCTGCCACAGATGAACTGTCACGCAATCTGCTGGCAACACTGTGCGAGGGCGTTGAGTCCAATGATCGCGCCGTCATCATCAGCTGCCTGGAGATATTGTACAAGCTGTGCGGCCGGGAGGGCAATGCCCAGCATATTAATCGTTGTCTTGGCTTGGATTTCTATCAGCGTGTCATGTTGCTTCTGTCTTTGACGGACGTAATGCTGCTGATCTTTACGCTGGAGGCTATTTATGCGCTGAGCTCGTTGGGTGCTCGTCCCTGCTCCATGCTGATGCAGGTGCGCGGATTGCTCGATCAGCTGGTCGCCCTGCTAACGGTGGAGGCGCAATCCTATGGCGCTGCTGGCTGCATTCTAATGCGCGTTGTCGAGGTTGTACCGGGCAATATGTTGTCCACTCTCCAACAGAATCTGCAAGGCGGCACACAAATGACGCAGCTTTCCACTGTTAAACAACAGCCGGCAATCGTTGCTGCACTGCCGCCGCCGACGCCAACACAGGTGCAGGTGTTGCCGCCGCAAGTGGAACCTGTTGCCCTACCCGCTCCTCCAGCAGTGCCAGCGCCTGCTCCGTCTCCGGCTCCTGTGGCTATGGCGCAACCCGCGCTACCTATGCCAATGCCCAGCTTGCCACAGGTACAGCTGCCTCCAATGCCCAGTTTGCCGCAAGTGCAGCTGCCGCCAATGCCAACGCCAACGCCCGCTCCATCTCCAGCTCCAGTTGTGTTACCAGTTGCGCCTTCGGCTCCACAGAGCTTCACCCACGACGATGAGACGTACGCCTTGGCCTGGCTGGGAGCCACCTATGAGCGTGCCGGCCAGGGCCACGAGCATCGTGTGGAGCAACAGGAGCTATACACCATTTATCTATCTCATTGCCAGAAGGCGGGCAAACATTCGGTTGTTAATCGTCTGCAATTTCCACGTCTGGTGCGGCTCATCTTCAATCCCAGCGTGGGTCCGGCCATAGTGCGTCAAGTGGATGGCACAGAGCTGCCCGGCACACATTATGTGGGCATCAGGATGCGTGCTCACCCGCTGCCCATGCAGAAGCAAACAGCTGCACTTAAAAAGGAGTCCAAACCAGAGCCAACTGCTAATGAAGCAGCATCGGACGAAGCTACTCAAGTTACGACGACAACGCCCAGCTCCTCGCTGATTAAAAGTCTGCTGGCCAACAAAGTCAACGAACGCCAGTTGAAACAAAAGGCGCAGGCACAGCCACCTGCTCTGGTGCCCACCACATCGTCGGTTACCGGCTCCTCGACAACGGGCCAACCCATTAAAGTAACCTCAACGGCAATCAGCGCCTTTGTCAATAATCCACTGATGTCGCACACTCCTGTGAAGGTGGGTCAAACGACCATAAAGCCACTGCATCCACAATTGGCGCTGGAGAAGAAACCAATGACAGATTCGGCGCCGCCACCCTTGGCTCCCTTGAGCGGCTCCAATGTGCTCGCCAAGGATGCGCAAGGACGCACCGTAATTATACAAAGCGCGTCCAAGCGCAAGCTAACCGTCGATGAGGAGCAGAACAAACGGCTGGCATTGGACATTGCTCCACCTGCCGCCGCCAAGGAGGAGACCCAGGTGACACCATCGAAGAATGCCGCCAATCTCTATGCGGATCTTGCGGCCTCCATACTCGAGGATGAGGATATGGATGATGTGCCGCCATTAGCAGCCTCCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGTGCAGCCTGCCCAGCGTCAGTTAATCTTTCCGGCTGGTGGTTCGCCTGCACCGCCGCCGCAACTTAAACTTGCCACAACGGCAACAATAAAAACCGATCAAGGATTGCAAACGGTGCCAGTTATATTGCAACAGAAAACGGATCAACAGCAGCAACAACAACAACAACCACAACAACAACAGACACAAACACAATATGTGCTGGCCACCAATCAGCAGGGACAAACGTATTTGGTGGCACAACAAACAACAGCAGCTGTCGCTGCCCCAGCCCAAACATCCTCAAACCCAACTCTGTTGGTCACCCAATCCCCGCAGCAGCAGACAAAAACTATAATCATACTGCAACAGCCGCCGGGTGTGAGTACATCGAATGTGCCTGGCACCCAAAAGGTCATTATGACAACGGCGCAGGGGCAACAGGTGCTGGTGACGACAACAACAGCACCCGTACAACAGCAGCAACAGCAGCAGCAACCACAACAAATCTATCTTAACCCGCAGCGAACGGTGCCAGCTGCATTGGGTGGGGGTCAAATGTCGCCGTCGTTGCTCTCCCAACTCAATCAAATACCGGCAACCATTAAGCTCCACCAACCACAGCCCGCACAGCAGCAGCAGCAACTACATCGCGTGTCTGCCAAGACTGCGCCCATACCACAACTGCAACAACATCAATCCATCATACAGCAGCACATCATTTCTGGCCCGAATTCAAGCCAAAACAAACAACAATTGCTGCTGGGTAACATTAAGGAGACAACACTCATCACACAAACGCCAGCAACAGCCGCGCCACTGCAACAAAGTCAACTCAATTCGCAGACAATTATAACGACACAGCCAACGGCACAGCAGCAGCAGCAGCAACAGCAGCAACCTCAACAACAACAACATATACGTACCGTGCTAGAACAACAACAGCAGCAACATCATCCATCCATAATACAGCAAAAGATTACAATGCCAACGGTGCTGACAGAGGCAATCAAGAATAAGGTTGCTGCCACAGCATCGATAGCCAAGAAGCCAATGCCGCCACCAACAGTGCAAATGCCTGCACTGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACACCCGTTGCCGCCGCTGTGCCTGTCGATGTCAACTGGCTGTTCATATGCGATTGGCGCAATTGTCCGCGTCGCAAATTTAAATCACTCAACGAGTTGCAGCATCACGTTTGCAACGTTCATTGTCCGGATCATTTGGATCAGGGTGCGGAGATCTATTGCCAGTGGGGCAGTGGACCCAGTTTGTGTGATAATATTGCACGCAAACGCTATTCCCTGATGACCCATCTGGTTGATCGTCATCTGGCGCTCGATGATTTGCGTGCCAGTGTGCAGCGACGCCTTGCAACGGGCATACACAATGTGGCACCAGCGCAGCCAACGGTAACAATTGTACGCAATGCGGGCACAGCTAGTGCTCCGGCAGCAACAGCAGCAGCCTCTACAACAACATCATCCCCCGCTGTTGGCACTTCAGCGTTGCAAGCAATTAAACGTCATTCGGCTGATTTTCTGAATTCCAAGGAGTTGCAGGATGAGAACGAGGGGCCAGTGACGAAGAGCATACGCTTAACGGCAGCGCTCATCTTACGTAATCTGGTCAACAATACATCGACGGCCAAACGTGGCCTAAAGCGCTACGAGCCACATTTGGCCAATGTGGCATTCAGCAATGTCGAAGCCAGCGGCGTCCTATCACACATCCTACACGAGTTGAGTCAATAA
- Protein Sequence
- MTSIDSVRVLLQSLPAASPAVVAANNNNSSNAALQNELTPAKYVAAAATPLRARNTQVQQQLIFGTPQKATIEDATESKEPNPPEQFWRDLHQFHERRGTPLTQAAKINGQHVDLYRLYKEVTDRGGFGKVNMRDEWDEVYSALDTLRERCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKMENLEAAIECADLGASASRSRSRAIIGAGGGSLIGSGLIVSGVMGGSINSTLTAVPMSYNQRQHIVNAERRRQHKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEPRPTLQLAECPKLLDVLLAHLGVYADYTMRQLFQHGHNNTGLQVRKHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLINKESCDDDGDAYFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLVRSLSFHQDNVTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFELLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSSLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLSTLQQNLQGGTQMTQLSTVKQQPAIVAALPPPTPTQVQVLPPQVEPVALPAPPAVPAPAPSPAPVAMAQPALPMPMPSLPQVQLPPMPSLPQVQLPPMPTPTPAPSPAPVVLPVAPSAPQSFTHDDETYALAWLGATYERAGQGHEHRVEQQELYTIYLSHCQKAGKHSVVNRLQFPRLVRLIFNPSVGPAIVRQVDGTELPGTHYVGIRMRAHPLPMQKQTAALKKESKPEPTANEAASDEATQVTTTTPSSSLIKSLLANKVNERQLKQKAQAQPPALVPTTSSVTGSSTTGQPIKVTSTAISAFVNNPLMSHTPVKVGQTTIKPLHPQLALEKKPMTDSAPPPLAPLSGSNVLAKDAQGRTVIIQSASKRKLTVDEEQNKRLALDIAPPAAAKEETQVTPSKNAANLYADLAASILEDEDMDDVPPLAASSXXXXXXXXXXXXXXXXXXXXXXXXKVQPAQRQLIFPAGGSPAPPPQLKLATTATIKTDQGLQTVPVILQQKTDQQQQQQQQPQQQQTQTQYVLATNQQGQTYLVAQQTTAAVAAPAQTSSNPTLLVTQSPQQQTKTIIILQQPPGVSTSNVPGTQKVIMTTAQGQQVLVTTTTAPVQQQQQQQQPQQIYLNPQRTVPAALGGGQMSPSLLSQLNQIPATIKLHQPQPAQQQQQLHRVSAKTAPIPQLQQHQSIIQQHIISGPNSSQNKQQLLLGNIKETTLITQTPATAAPLQQSQLNSQTIITTQPTAQQQQQQQQQPQQQQHIRTVLEQQQQQHHPSIIQQKITMPTVLTEAIKNKVAATASIAKKPMPPPTVQMPALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPVAAAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDQGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVAPAQPTVTIVRNAGTASAPAATAAASTTTSSPAVGTSALQAIKRHSADFLNSKELQDENEGPVTKSIRLTAALILRNLVNNTSTAKRGLKRYEPHLANVAFSNVEASGVLSHILHELSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01321702; iTF_01326176;
- 90% Identity
- -
- 80% Identity
- -