Sgra014143.1
Basic Information
- Insect
- Scaptomyza graminum
- Gene Symbol
- Kdm5
- Assembly
- GCA_018901835.1
- Location
- JAEIFL010000002.1:13604211-13610325[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-26 2.9e-23 81.8 0.1 2 89 245 328 244 328 0.95
Sequence Information
- Coding Sequence
- ATGTCCGCCAAAGCAGAGGCGGACAATCCGGCCGCCAGCGCCACAGCGAGTGGTGGCGGCTTGAATAGCATCTCCAATGGGACTATAACACCAGCCAGACGACTGCGCACACGCAACTCAACCGGCAGTGGCAGCGAGTCTGCCAAAAAGAATACCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAATGATGCAACTGGATCCTCATCATCATCATCAACAACAACAGCGACGCCTGCATCAGGTGGTGGAGGTGCTGGTGGTTCATTGTCATCAGCAAATCCAACACCCGGCTCGGTGGAACGTCCCATGCCCAGTGTGCCGATGAATCATGCTAGCAGCAGTGTTTCAGCCGGTCGAAAATATCACAACAGCTGTCCGCATCCAATACCGACGGTGCACAAGAAATCGCTGCACACGAAGCCGCACAGCACCAACAAATTCGATGAGGGCAAGAATGAGGAATTCCATTTTGATACGCCGCCCGAGTGTCCGGTGTTTAGACCCACAGTGGAGGAGTTTAAAAATCCATTGGCCTACATCAGCAAGATTCGCTCCATAGCCGAGAAATGTGGCATTGCCAAGATATTACCGCCAGAGAAATGGGCTCCGCCATTTGCCGTCGATTTGGACAAATTGCGTTTTGTGCCGCGCGTGCAACGCCTCAACGAACTGGAGGCCAAGACGCGCGTCAAACTAAACTTCTTAGATCAAATTGCCAAGTTCTGGGAGCTGCAGGGCTCATCACTCAAAATACCGATGGTAGAGCGCAAAGCTCTTGATCTGTACACGCTGCATCGCGTCGTTCAAGAGGAGGGCGGCATGGAGCAAACAACCAAGGAGCGCAAATGGGCCAAAGTTGCCAATCGCATGCAATATCCATCCAGCAAAAGTGTTGGCGCCACACTCAAAGCCCACTACGAGCGCATTCTGCATCCCTTTGAGGTGTACACCTCTGGCAAAGTTTTGGGATCAGGTTCTGCTGCTGGTGGTGGCGTATCGACAACAGGCGCAACGCCCGTCAAGCTCGAAGATGTCGGCACCGATTACAAGGCCCATGAAATACCCACACGTCAGCAAATTGCGCCACCAAATGAGAACAACACGCGTCGCTCCAAACGCTTTGGCAACTCGAATGCCGGCTGCGGCTTAAACATGGCCAAGCCAGGATGTGCTGCATCCAATGCTGCTGCTGCAGTTGCAGCTGCTGCTTGTGCAATCAAAACGGAGACCAAGGAGGACTTCAAACGGGACCTCTTAAGCAGCTTCAATGCGGTTAATAATGCTGGTGGAGGCGGTGGTGGTGCTGCTACTACTGCTAATTCTACTACTGGCAGTGGTGGCGGTGGTGCACCTGCACCGAATACACGCGCCACCCAAAAGAAGGCAACAACGGAACAGTCACAGTCACAACCGCTTATCGATCCACTCATGAAATACATATGCCACATCTGCAATCGCGGCGATGTCGAAGAGTCCATGCTGCTGTGTGATGGCTGCGACGATAGCTATCATACGTTCTGTCTATTGCCACCGCTGAGCAGCATACCCAAAGGAGAATGGCTTTGCCCGCGTTGCGTTGTGGAGGAGGTAAGCAAGCCGCAGGAAGCATTTGGTTTCGAGCAGGCCGAGCGTGAGTACACATTGGGTCAGTTTGGTGAAATGGCCGAGCAGTTCAAGCAGGAATACTTTCGGAAGCCGGCACACTTGGTCACCACAGAGATGGTGGAGCGTGAGTTCTGGCGTATTGTGTCCTCGATTGATGAAGATGTCACCGTCGAATATGGCGCTGATTTGCATACCATGGATCATGGCTCTGGGTTTCCTACCAAAAGCTCACATTACTTGTTGCCGGGCGATCAGGAGTACGCCGAGTCGAATTGGAATTTAAATAATCTGCCGCTGCTTGAGGACTCGATACTGGGACACATTAATGCTGATATCAGCGGCATGAATGCACCATGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAGTTATTCGATTAATTATTTGCATTGGGGCGAGGCAAAGACCTGGTACGGTGTGCCCGGCTCCCGTGCCGAACAATTCGAGGAGACAATGAAGCGTGCCGCACCCGAGCTCTTCTCCTCGCAGCCAGATTTGCTGCATCAGCTGGTCACGATTATGAATCCCAACATCTTGATGAACAATGGCGTGCCCGTTTATCGCACCGATCAGCATGCTGGCGAGTTTGTCATCACATTTCCGCGCGCCTATCACGCCGGCTTTAACCAGGGCTACAATTTTGCCGAAGCTGTTAACTTTGCACCAGCCGATTGGCTTAAGATGGGACGCGAGTGCGTCAATCATTATTCAATGCTGCGACGATTCTGTGTTTTCTCGCACGATGAGCTCGTTTGCAAAATGGCCTTGGAGCCGGCCAAGCTGACATTTGGTATTGCCACCGCTTGTTACATAGACATGGCCGAAATGGTCGACACCGAAAAGAAACTACGCAAATCTTTGCTGGAATGGGGCGTCACACGTGCCGAACGTCGCGCCTTTGAGCTGGTCAACGATGACGAGCGCCATTGCCAGGAGTGCAACACCACCTGCTTCCTGTCGGCCGTTGCCTGTGAGTGCAACGACAAGCTGATTGTCTGTCTGCGTCACTACACCGTTCTGTGCGGCTGTGCACCAGAGAAACATACACTCATCTATCGCTATACCCTGGATGAGATGCCGCTCATGCTGCAAAAGTTAAAGGTCAAGGCGCACAGCTTTGAACGTTGGCTCTCACGTTGTCGCGACATTGTCGATGCACACACGCCCACCTCGGTGACGCTCTCCGAGCTGCAGGAATTGTGCAAGGAGGCCGAAACTAAAAAGTTTCCCTCATCGCTGCTCATCGATCGTCTCAACGCGGCGGCCATTGAGGCCGAGAAATGTGTCACTGTCATCCAACAGCTAGGCATTAATAAGGTACGCACTCGCTCCGATCACAATCAGGAGGCAGCACAGTACAAGCTGACCATGGAGGAGCTTGAGTTGTTTGTACAGGAAATCGATAATTTATGCTGTATCATTGATGAGGGCGCCTCGGTGCGTGAGCTACTGGTGTTGGGCAAACAGTTTGTGGAGCGAGCCAAGGCGCAGTTGCAACAGTCACTGGAGGTGCTCGAGGAGAATGAGCTGGAGACACTAATCAATGAGGGCAGCTCGTTGCGCATTGAACTGCAGCAGCTGGATCAGCTGCAGAAGCGTCTCAAGCAATGCAAATGGTACAAACGCTCGCAGGGTTTGCGCGAGACAAGCTCAAAGTTGACCTACAAGGATGTGGAAACGCTGCTGCATACCGCTGCCGCTGATCTGGATCCCAATGATCCCTTTGTGGATCGGGAGATGCGCAAACTGCAAACAATTGGTGCTGCAATCGAGGCATGGGAATTGCAAGCAGCCAAATATTTCCGCCGTCTCAATCAGCAGCATGAGCTGGTCGAGATTGAGCAGTTTCTTAAGTCCGCTAGCGAAATAAATGGGCAGGTGCCGTCGCATGGCATGCTAAAGGATGCGCTGCGCAAGGCACGCGAATGGTTGCGCGCCGTGGAGCAGCTGCAGCAAAACAATCATGTTACCTACTGTCACACGCTGGAGGCAATGATTGAGCGGGGTTTGAGTATACCCATACAGCTGGAGGAGCTGGGCCGCATGCAGGGACATTTGAATAGTGCGCATCAGTGGAAGGAGAATACGGCGCAAGCGTTCCTCAAGAAGGGCACATTCTATACGCTGCTGGAGGTGCTGATGCCACGTGCGGATGCCATTAATATTGACTCGGATCTCAAGCCGCGTTTCCAAGATGATTTCCTCAAGGACAAGAACCCCGCCGAAATTGTAGCCAGCTTCAAGCAAGCTGAGGAGCAGGAGCTGCGCGATATGCGCGATCTTCGTCGCCAGAATATGACCAAGAATTCATTGCGCGATGTCTTTTGCCTGTGCAAATCGGAATTCCGTGGTCTGATGTACAATTGTCAGCTGTGCCGCGATTGGTTTCATGAGGACTGCGTCCCACCGCCGCCTACAGCGCATCCATTGACGGCACAACAGAATGGCAACGGTGGTGGTGCAATTAATGGTGGCGCATCCGCTTCGACGCAACCGAAATGGCTATGTCCGAGCTGTGTGCGCTCGAAGCGTCCACGTTTGGAGACAATTTTACCGCTGCTCGTTCAGTTACAACAGCTGCCCATCCGCCTGCCTGAGGATGAGGCATTACGCTGTTTGGCGGAGCGTGCCATGAACTGGCAGGATCGTGCACGCAAAGCTCTGAGCAGTCCCGATGTCAGCGCCGCCCTGGATGCCATCTTGTTGCAACAGCAGAAGCGACGCACGGAAAGTGGCAGCGGTGGCATGGCTGTCCTGGGCAACATAAACAGTCCACGCAAACCGCGACGTCAACACAAGCAGGGTACAAACAATGCGCTACGCTCCGAATCCGATGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCGCAGATCTCCTCAAGCTGCTTTCCGACAGCGAAATTGAGAATCTGCTCGAGCTAATGATGGAAGGTGACTTGCTGGAGGTGTCGCTGGATGAGACGCAAGAGCTGTGGCGCATACTGCAAACAATGCCGCCAACAATGCTGCAAGCGGAGGCCAAAGCACGCGTGGCACAGCACATGCAGCAGCAGCATTTGCAACAGCAGACGCTGGGTGCAAATGCTCTCACTACGGGCGCCTCCTCGTCGAGCATACACAGCGGCGCTGATGATTCTAATGATAGCCTGCTTGTTCAAAACAGTCCAAGTCCCAATGCACAAGCTGTGCGCAACAAGAAGCGTCGCTCCAATGACTCTAGCAGCGCCAATGTGGCTGTGCCGCGCAAGAAACAGAGTACGCCCAAGCAGACGCCGGGCAAAAAGCAAGCGGTACGCAAAAGCGATAGCAAGGCAAGCACCTCGCCCGGCGTTGATGCCGATGCCGAGAATAAGCAGGCAAACGGTGGCAATACCACCAGCACCACACCAACAACAACAACAACATTAGCAACTCCAACCACAACAACGCCGGGATCAGCTGCTGCTGGTGGTGTTGGAACAACAGGCACAGCTGCCACACCACCAGCCACAACCCCACCAGGCTCGGCTGGTCATAAGAAACGCAAGCGCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGGCGGCACACCAACATCGGGCACTAATCCCATAACAGGTGGCGGGCAAAAGAAGCATGCGCAACGCACACAGCAAACGGCGCAGGAGGATGACGAAGAGGAATGTCGGGCAGAGAATTGCCATAAGCCAACTGGACGCGAGGTGGATTGGGTTCAGTGTGATGGTGGCTGCAACGAATGGTTCCACATGTACTGTGTGGGCCTGAATCGTAGTCAGATTAAGGCGGACGACGATTACATATGCATACGCTGCTCCAAGACGGTCAGTGTGGGCGTTGCCGGTGGCAGCAACAGTAGTCTAACGCTCACCACAACAACAACAACCACGAGCAGCTTGACGTTAAGCACAGGGACACCGGGTAAGCAGCGAGCTGCGCAATCGGCGCGGTAG
- Protein Sequence
- MSAKAEADNPAASATASGGGLNSISNGTITPARRLRTRNSTGSGSESAKKNTSXXXXXXXXXXXXXXXXXXXXXXNDATGSSSSSSTTTATPASGGGGAGGSLSSANPTPGSVERPMPSVPMNHASSSVSAGRKYHNSCPHPIPTVHKKSLHTKPHSTNKFDEGKNEEFHFDTPPECPVFRPTVEEFKNPLAYISKIRSIAEKCGIAKILPPEKWAPPFAVDLDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGSGSAAGGGVSTTGATPVKLEDVGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNAGCGLNMAKPGCAASNAAAAVAAAACAIKTETKEDFKRDLLSSFNAVNNAGGGGGGAATTANSTTGSGGGGAPAPNTRATQKKATTEQSQSQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLGQFGEMAEQFKQEYFRKPAHLVTTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESNWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSRAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLSELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVERAKAQLQQSLEVLEENELETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYKDVETLLHTAAADLDPNDPFVDREMRKLQTIGAAIEAWELQAAKYFRRLNQQHELVEIEQFLKSASEINGQVPSHGMLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLSIPIQLEELGRMQGHLNSAHQWKENTAQAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKQAEEQELRDMRDLRRQNMTKNSLRDVFCLCKSEFRGLMYNCQLCRDWFHEDCVPPPPTAHPLTAQQNGNGGGAINGGASASTQPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILLQQQKRRTESGSGGMAVLGNINSPRKPRRQHKQGTNNALRSESDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADLLKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILQTMPPTMLQAEAKARVAQHMQQQHLQQQTLGANALTTGASSSSIHSGADDSNDSLLVQNSPSPNAQAVRNKKRRSNDSSSANVAVPRKKQSTPKQTPGKKQAVRKSDSKASTSPGVDADAENKQANGGNTTSTTPTTTTTLATPTTTTPGSAAAGGVGTTGTAATPPATTPPGSAGHKKRKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTPTSGTNPITGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAGGSNSSLTLTTTTTTTSSLTLSTGTPGKQRAAQSAR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00901271;
- 90% Identity
- iTF_01321699; iTF_01323892; iTF_01323161;
- 80% Identity
- -