Sfla011246.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza flava
Gene Symbol
nfxl1
Assembly
GCA_003952975.1
Location
RKRM01000086.1:79893-83156[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 3 1.6e+04 -8.1 6.4 15 19 148 152 147 152 0.82
2 22 0.19 1e+03 -0.3 0.4 4 10 183 189 182 189 0.95
3 22 9.7e-08 0.00053 19.8 15.5 1 18 197 213 197 214 0.98
4 22 1.6 8.5e+03 -3.2 2.7 6 10 240 244 239 244 0.89
5 22 1.4e-07 0.00079 19.3 17.0 1 19 250 269 250 269 0.98
6 22 1.8 9.6e+03 -3.4 0.9 5 10 293 298 293 298 0.92
7 22 4.6e-07 0.0025 17.7 12.4 1 19 304 323 304 330 0.95
8 22 1.2 6.7e+03 -2.9 0.5 1 8 347 353 346 354 0.50
9 22 3.6e-08 0.0002 21.2 12.1 1 18 357 374 357 375 0.97
10 22 1 5.7e+03 -2.7 0.4 1 5 384 388 384 393 0.73
11 22 3 1.6e+04 -5.0 2.3 5 10 398 403 398 403 0.91
12 22 0.033 1.8e+02 2.2 15.9 1 18 409 426 409 427 0.94
13 22 2e-08 0.00011 22.0 13.1 1 19 436 454 436 454 0.94
14 22 1.6 8.9e+03 -3.3 2.0 6 10 482 486 482 486 0.98
15 22 8.1e-05 0.44 10.5 7.2 9 18 499 508 497 509 0.90
16 22 0.041 2.2e+02 1.8 5.7 1 11 521 530 521 531 0.95
17 22 2.7e-05 0.15 12.0 4.1 1 11 596 606 596 607 0.96
18 22 2.5 1.4e+04 -3.9 1.4 5 10 622 627 622 627 0.87
19 22 0.047 2.6e+02 1.6 13.3 3 19 636 652 635 652 0.92
20 22 2.5 1.3e+04 -3.8 1.4 8 13 657 662 656 662 0.73
21 22 1.2e-06 0.0067 16.3 12.0 1 16 703 717 703 723 0.90
22 22 3 1.6e+04 -4.2 0.9 11 16 753 758 753 758 0.73

Sequence Information

Coding Sequence
ATGgaaaagtttaataaagtgCAGGCAAAGAATTTGGCAGCCGCAAAAAAGCTAGTTGATGTTTATGCATCAAGTTCGGAGGATGAAGGTGAACTGGATGAAAAACATATACTAGATCTACTTTACAGACATTATAAATCTTTGCCGGATAACTCAAATGCCAGCAATAATGCAAATCGTACAGCTACTTTCTTGGAAAACACTCTTCACTCAGGAGCTGCGACCTGCCTGATTTGTATTGGCAGCATCCGACGAGTGGAGGCCATTTGGTCCTGCAAGTCATGCTACTGTTTCTTCCATCTCAAGTGCATACAACGCTGGGCCAACGATAGTGTCATGCAAATGAAAGTCAAGGCAGAGCAGCTAAATGGTAGTCAGGGACACTACAATCATATTGGCGAATTTGTGCTACCAAAGCGTCCGAAATCGTTGCACTGGTGCTGTCCACAATGTCGAACGGAGTACCAGCCTACTGAGCGGCCCACCCAATATGAATGTTTTTGCAGCAAAGAGGTGAATCCAGAGGCACAACCCTTTCTGGTGCCGCACTCCTGCGGCGAGATCTGTGGCAAACTGCTGCAGCCTCAATGTGGCCACGATTGCAAGCTACTCTGTCATCCGGGTCCGTGTCCGCCATGTGCCCAACAAGCTTATAGTTCCTGTTTGTGTGGCAACTCTCCGCCACGCTCGGTACGCTGCATTGACAAGGATTGGCAATGCCAGCAGACGtGCCAATCTTTATTGTCTTGTGGCAAGCATAAATGCAACCAAAGATGCCATCGTCCTGGCCAGTGTCCGCcgtgcagcagcaaaagctcCCAGTACTGCGATTGCAAACGTGAACAAAAAGTTATCAATTGCGCAGACCCCAAATggaaatgtaaaaatATATGTGGCGCTCTGTTTGATTGTGGCGTGCATAGCTGCGATAACTTATGCCATGCTGGTCCCTGTGCCGGTGAATGTCCCTTGAGTGTTCGCAGTTGCCCGTGCGGCAAAAACATTAAAACTGGCGGCTGTAGCGAAGTGCTGGAAACCTGTGGCGATACCTGCCAAAAGGTATTGTCCTGTGGCAAGCACAGCTGTGCCCAGCGTTGCCATCGCGGGCCTTGCAACGTGtgTCTGGTGCGCACCAAGAAGAAATGCCGTTGCGGGCTACATGAAAAGGAGCTGCCTTGCTCCAAGGATTTCACCTGCGAAACTAAATGCAAACTGATGCGCGATTGCAATAAGCACGCCTGCAATCGCAAGtgCTGTGGCGATCAGTGTCCGCCTTGTGAGAAGATCTGCGCCAAGCAATTGAGCTGCAACAAGCACAAGTGTCAGAGTGTGTGCCACAATGGACCATGTTATCCGTGCAAGTTGGAGTCGCAGGTTAATTGTCGCTGTGGCAAAACACGTCGCAGCGTTCCTTGTGGCAGGGAGAAGAGTGCACGTATTGTCTGTCAGGAGCTCTGCCGAATCTCGAGCAAATGTCATCATGCTATTAAGCATCGTTGCCACAAAGGCGAGTGCCCGCCATGCGCTCAGCAATGTGGATTACCCAATGATACCAGCGGATGTGGACACATATGCAAGGTGCGCTGCCATGCGGCCATACGTGTGCCCACAACAGCAGATACAGTGCGTCCACATGCCACTAAGTACGAATACCGTGCACAGCCGCATCCGCGTTGCGAGGAAGGTGTTAGTGTCACCTGCATTGGTGGTCATGAGGTCGCCACCTGGCCATGCTGGAACTCCAAGCCATCGTCTTGTGCACGCAAATGTGGTCGGCAGTTAAAGTGTGGCAATCACAAGTGCACGCTGTTTTGTCATGCGGTGCCCAATCTCATGGATATGCAGCAGCAAGTGGGATGCGCTAACTGCGAGCAGAGATGCGCTATGGTTCGTCCTGCCGGTTGCACACATGCCTGTGCCAAAGGCTGTCATCTTCCTCCCTGTGCGCCATGTAGTTTTGTAATCAAGAACAAGTGTCATTGCGGCCTCAATCAGGTTATTTACAAGTGCAGCGAATTTTATAACGAAGAGGGATCGGTGCTGAATATCCTTGAGCGCCGACAAAAGTTGTGCAGCTGTGGCAATCGTTGTTTGAATAATtttgcttGCGGACATCGCTGCATGACCATTTGTCATCCTGGCCCATGTCCTAATCCTCAGATGTGTCGCAAAAAAGTGCGAATTTATTGTGCTTGCAAGCGCATCAAATTGGAGATAGCCTGTGACAAGCATCGAGCGGGTCAAACATCTTTGGAGTGTGATGGCAGCTGTCAGGCAGAGCGCTCCAAGGCAGAAGCAaaggagcagcaacaatttgagCGCCGTTTGCGGCAGGAGGAGGAAAAGAATCGTCTAGAGCTGGAGAAATTCGAGCAAAAGTTTGGCAAGCGTAAACCCAAGGAGCGCAAAAAGATTGATGTCCAGTCGACCAAATCCAAAATTGACTGGAAACGTTGGGCTATCTGTGCAGTAGCGCTCCTTGCGGCACTAGGTGCTCTTGCTGTGGCTTACTATGCGGAGAGTTAA
Protein Sequence
MEKFNKVQAKNLAAAKKLVDVYASSSEDEGELDEKHILDLLYRHYKSLPDNSNASNNANRTATFLENTLHSGAATCLICIGSIRRVEAIWSCKSCYCFFHLKCIQRWANDSVMQMKVKAEQLNGSQGHYNHIGEFVLPKRPKSLHWCCPQCRTEYQPTERPTQYECFCSKEVNPEAQPFLVPHSCGEICGKLLQPQCGHDCKLLCHPGPCPPCAQQAYSSCLCGNSPPRSVRCIDKDWQCQQTCQSLLSCGKHKCNQRCHRPGQCPPCSSKSSQYCDCKREQKVINCADPKWKCKNICGALFDCGVHSCDNLCHAGPCAGECPLSVRSCPCGKNIKTGGCSEVLETCGDTCQKVLSCGKHSCAQRCHRGPCNVCLVRTKKKCRCGLHEKELPCSKDFTCETKCKLMRDCNKHACNRKCCGDQCPPCEKICAKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIVCQELCRISSKCHHAIKHRCHKGECPPCAQQCGLPNDTSGCGHICKVRCHAAIRVPTTADTVRPHATKYEYRAQPHPRCEEGVSVTCIGGHEVATWPCWNSKPSSCARKCGRQLKCGNHKCTLFCHAVPNLMDMQQQVGCANCEQRCAMVRPAGCTHACAKGCHLPPCAPCSFVIKNKCHCGLNQVIYKCSEFYNEEGSVLNILERRQKLCSCGNRCLNNFACGHRCMTICHPGPCPNPQMCRKKVRIYCACKRIKLEIACDKHRAGQTSLECDGSCQAERSKAEAKEQQQFERRLRQEEEKNRLELEKFEQKFGKRKPKERKKIDVQSTKSKIDWKRWAICAVALLAALGALAVAYYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01324578;
90% Identity
iTF_01323792;
80% Identity
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