Sfla014567.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- Gata6
- Assembly
- GCA_003952975.1
- Location
- RKRM01000088.1:99824-106873[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.1 2.8e+02 1.1 3.5 1 31 481 506 480 511 0.79 2 2 2.8e-17 7.6e-14 50.9 7.7 1 34 532 564 532 566 0.97
Sequence Information
- Coding Sequence
- ATGGTGTGCAGTTGTATTGATATAGTCGATATCAAGATGCAGCTGAAGATGGAAGCGCAGACGAcgccgcagcaacagcagcaacagcaacagcagcaacagcaacaactgcaacagcaacaacaggtgctaagcaaacaacagctgcaattgctggataaaataaaaattgagaCTAGCAACGGCAACGATCAGCCAGCCAACACTGTGCTGGACCAGGAGCAACAggagcagccacaacaacaacaacagcaacaacagcaagcggcaacaacaactgttggTGCTCTGGTGCAATCGAATAGCCAAGCAAGTGAATCCgatgaacaacagcaacaccagaCGCAATATGTTGTTGTTCCACGCCCACAACAACGACGCATTCTTACAACAGCGGGCACACTAGAACTGAACGAGACAGGTGAAGGCGATCACAGCaccaataacagcagcagtggAAGTTCTAATTCGGCAACAGAGACTCACATTGAGTATCAGCGTAGTTCGCACCACTCACCCCACTACATTCAAATGGCACCACGCACCGCTGCCGAGGTGGCCGAGCAAGTGGCAAATGCTCATCCGGGTACACTGTATGCTTATCCCTCGGGTCAAATCATATGCAGCAGTAATAATGTGGCACCCATTAAAATCGAAACAATTGAGAAAAGCGAAGTGTCGGGAGAATCGCAATTgcaacagccgcagcaactagcacatcaacaacagcaacagcagcaacagcaacagcaatgtcCAACGCCAAATGGTGGACCATATGGGGAAACTATTGTGGTCAGCAGTGAGGCTGCACTGCAGCATCatcaccagcaacaacagcagcagcagcagcagcatcagcatcaacagcaacaacaggcagcagctgcagcggctgcagcagttgcagctgcacaAGCGCACAGTGTCCGTTATGTTGAGGAGACGCCCAGCGGCAATATGTACTATGAAACGTCCGTTTTGGACGCCACTGTGCATCCTAATGAGTCAAAGACCTATGCTGATTTGGGCAATGCCTATGCTACCTTTCCGCCCAACTCGACGTTCAGCAGCAATAGTTATGCTGCGGCAGCAACATTGCAGGGCAATACCATATACAGTGTGCCAGGGACAGCACAGTTTATAACCAAATCCGATCCGAACTTGAATCCGTTAAGGCAAACCGCAACAGGACCATATCAGACCATATCTTTCCTAGATGGCacaactgctgctgatgcGGGACTGTGGACGACGGCTGGTGGGGATTATCAGAATGTATCCTTTGCAAACTATCAAACACAGGTCATTGACGACTATCCCACGGGCAACATGACGACAGCCCATTGGTCCCCCGCAGGCAGCATTGGCAACTATGATCCTGGACTGGGTGCAACTAGTGCCACACCACCATCCACCCATGGCCTGCAGGAGCTGAAATGTGAGAATTGTCAGACACCATTCATGCGCAAGGGCAGCGAGTGGCCCAACTGCCCCAATTGCTTTTTGCGCGCCCAAGGTGGACGCCATGTGCCACAACGCCAGAAACCAAAGGCTACAGCGGCGCCCAACAACCGGCGCAATGGAGTCACCTGCGCCAACTGTCAGACCAACTCGACGACGCTCTGGCGGCGCAACAACGAGGGCAATCCCGTCTGCAATGCCTGTGGTCTCTATTACAAGCTGCACAACATGAATCGGCCGCTCTCCATGAAAAAGGAAGGCATCCAGAAACGCAAGCGCAAACCAAAGAACAATGGAGGGCCTCTACCCCATCGAGTGCTGCCAAgcatGTCACAGGGTGTTAACTTGATGGTGAACAGCGGCATGGTGTATCCATCTCAGGTGGCAGTGGGTTTGCCGACCAGCCAACAAAATGCCAGTCCCGAGTTGCATGACATGTCCACAACTGGTCCCGCTGGCGGACAACGTGTGGTGGCCATTGCGCTTAATCCCACAGTACCGACATCCGACGGTACATTAAACATGTCGCGTCACCATGTGACAAGTGAGAGCCACTCTCCTTTtagccagcagcaacagcaacagcatcagcaacaacagcagcaacagcaaccacaacagcaacagcaacaacaacagccaccgTCACAGAGTCAATCGCCACATTTGCCCAACTCCGTAACACTGAACCGTCAGATTGCACAGTCTGTTCCTCCAATCGAAAGTGGCCGTAGTTCCAATAGCGAGCTGACTCCTACCGTTATAACGCGTACAGGTCTGCCGGAACGTTCATCGAATAACTAA
- Protein Sequence
- MVCSCIDIVDIKMQLKMEAQTTPQQQQQQQQQQQQQLQQQQQVLSKQQLQLLDKIKIETSNGNDQPANTVLDQEQQEQPQQQQQQQQQAATTTVGALVQSNSQASESDEQQQHQTQYVVVPRPQQRRILTTAGTLELNETGEGDHSTNNSSSGSSNSATETHIEYQRSSHHSPHYIQMAPRTAAEVAEQVANAHPGTLYAYPSGQIICSSNNVAPIKIETIEKSEVSGESQLQQPQQLAHQQQQQQQQQQQCPTPNGGPYGETIVVSSEAALQHHHQQQQQQQQQHQHQQQQQAAAAAAAAVAAAQAHSVRYVEETPSGNMYYETSVLDATVHPNESKTYADLGNAYATFPPNSTFSSNSYAAAATLQGNTIYSVPGTAQFITKSDPNLNPLRQTATGPYQTISFLDGTTAADAGLWTTAGGDYQNVSFANYQTQVIDDYPTGNMTTAHWSPAGSIGNYDPGLGATSATPPSTHGLQELKCENCQTPFMRKGSEWPNCPNCFLRAQGGRHVPQRQKPKATAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGPLPHRVLPSMSQGVNLMVNSGMVYPSQVAVGLPTSQQNASPELHDMSTTGPAGGQRVVAIALNPTVPTSDGTLNMSRHHVTSESHSPFSQQQQQQHQQQQQQQQPQQQQQQQQPPSQSQSPHLPNSVTLNRQIAQSVPPIESGRSSNSELTPTVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01326054;
- 90% Identity
- iTF_01326054; iTF_01326823;
- 80% Identity
- -