Basic Information

Insect: Scaptomyza flava
Gene Symbol: Znf574
Assembly: GCA_003952975.1
Location: RKRM01000009.1:531800-535398[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.083 6.3 7.3 0.2 2 23 332 354 331 354 0.96

2 10 2.5 1.9e+02 2.7 0.2 6 23 364 381 364 381 0.97

3 10 6.8e-06 0.00052 20.2 0.5 1 23 387 409 387 409 0.98

4 10 0.00045 0.034 14.5 0.7 1 23 419 442 419 442 0.93

5 10 0.00028 0.022 15.1 2.5 1 23 450 473 450 473 0.97

6 10 8.2e-06 0.00063 19.9 1.0 3 23 481 502 479 502 0.94

7 10 0.0025 0.19 12.2 0.4 2 23 514 536 513 536 0.97

8 10 3.1e-05 0.0024 18.1 3.6 1 23 543 566 543 566 0.93

9 10 2e-06 0.00015 21.9 1.2 1 23 572 594 572 594 0.98

10 10 4.7e-05 0.0036 17.6 1.4 1 23 600 623 600 623 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.083	6.3	7.3	0.2	2	23	332	354	331	354	0.96
2	10	2.5	1.9e+02	2.7	0.2	6	23	364	381	364	381	0.97
3	10	6.8e-06	0.00052	20.2	0.5	1	23	387	409	387	409	0.98
4	10	0.00045	0.034	14.5	0.7	1	23	419	442	419	442	0.93
5	10	0.00028	0.022	15.1	2.5	1	23	450	473	450	473	0.97
6	10	8.2e-06	0.00063	19.9	1.0	3	23	481	502	479	502	0.94
7	10	0.0025	0.19	12.2	0.4	2	23	514	536	513	536	0.97
8	10	3.1e-05	0.0024	18.1	3.6	1	23	543	566	543	566	0.93
9	10	2e-06	0.00015	21.9	1.2	1	23	572	594	572	594	0.98
10	10	4.7e-05	0.0036	17.6	1.4	1	23	600	623	600	623	0.97

Sequence Information

Coding Sequence: ATGGAAGCTTGTGTGCTATGCTTTGACCGCTGCAAAATCGGCGAATCGTACAAGATATTTTCCGAGACAGGTTTGCGGCTTAACatttgcaaaacaataaacaaacactttTGGCTCGAGTTAAGCAGCGCAACGGGAGGTGAGCGGGAAGAAATATGCTACCAATGCTGGGAGTGCGTAAGCAACTTTAACGCATTCTATCAGCGCGTCTATAACACACACCAGGAACGACGATGCGATATTAAGAATGCGCCCATTGAGTTCTGCGGCGAGTCGGAAACAGCAAATCCTCTTGCCTTTGGCGGAGAGTTGGATGCATTGGCCGAGGATTTCTTTGCAACTGGTGATGTCAAGGTGGAGGTGAACGAACTTGAACCGCTGCCCAAGCTTGTAATGATCGAAGAACCAGTGCTTGAAGAAAAGGGCAGTACAACCAAACGCGCCTCAATCGAGCAAACAGCGTCAACTAAGAAGCGTATTAAAAAGGAGCAGCGCCCAATTGCCAGTGACTCTGATGGAGACATACCGTTGGCTGAGTTCCTGGACATTAAGCCAGCAGTAGCAGCTAGCAAGCAATTACCTGTCAAGGCTCAACCACTGCGGAGAAGCACTCGACGTGGCCGCCCaccaaaaaaactaaaaacaccGCCAGATTCGCCTTCGCTTACTCCTAAAAAGGAATTTCAGTCTGATGATGAACATGATAATGATCATGATATGGACTTCGTAGCCGCCGTAGCATTGCTTGGCACAGAAGACAGCGCAAGTTCGAGCGAGAGCAGTGACAGCGCCTCTGGGAATAGTCTGCCGGATGTTGAGCCGGAGGAGCGCTACGCAGAAATACCAAAACGGGTTGTGGTCAAGCCCAAAAAGTATCGAAAGCGTCCCAAACCGTTGGTGCCGCCGGTGCGCATGAGTCGCGAGGAGCTCGAAAGACGAAAGGCGCAACAAAACGAATACGATGAGattatttttgagtttttcaaAAAGCTGCCATGTCACGTATGCAATCTTCTAGTGCCCAATTTCGGAGACATGCTTCGTCATCTGCGCATGTCTCACAATATAGAGAGTGGCTTCATTGCATGCTGTGGTCGTAAGTTTCACATACGCCGCGGTCTGGCTGAGCATGTGCTGGTCCACAATAATCCTAAGCACTTTATGTGCACCCAGTGCGGACGTGTGTTTCAAGACTCCAAAACGCTGGAGGCGCACGAGCAAACACACACGAATCCCCAAACGGATAAGCGCATGTATCCGTGCGAAAAGTGTTCTAAGACCTTTACTACAAAAGCCGCCGTCGCGTATCACAATATGTCAAAGCATGTGCCCAAGTCAGATTTCAAATATACCTGCCCCGAGTGCAATAAGAAGCTGCCCACAGAACGCAAGCTTAAGGAACATAGACGACATATGCACGATCCTGAAACGGCAATCATTTGCGATAAGTGTGGCAAAACGTTGCGTACTCAGGCAAATCTAAAGAAACACCACGAAATTGAGCATTCCGATACGCCACGCCCCAAACCGGATCCCGTGCAATGCGAGATTTGCGGAACTTGGTTGCGTCATATATCTGGCCTCAAGCAGCATATGAAGACAGTACATGAACCTCCGGGTGGTGAGCATCGCTGTCCCATCTGCGACAAGACGTCCACCAATTCTCGGGCACTAAAGCGACACATTTATCACAATCATCAATGCGAAAGAAAGTTCCGCTGTACCATGTGTGAAAAGGCCTTTAAGAGGCCACAGGATTTGAGAGAGCACACATCGACGCACACGGGCGAGGTGTTATACACGTGTCCAAACTGTCCGCAGACGTTTTTTTCCAATGCCAACATGTACAAGCATCGCCAGCGATTGCATCGTGCCGAATGGGAAGCGGACCGCAAGAAACCGTTGCCTCCCAACATAATGCAGCAGGCAGCCACGAAAAAGCGTCAGGCGAGCAGTGCCGTTGGCCCTGCGATGGTCATGCAACACGCAGAGCCCACTGCCGCAATTACCCTCAAGCAGGAATCACAACAGTTGCATtag
Protein Sequence: MEACVLCFDRCKIGESYKIFSETGLRLNICKTINKHFWLELSSATGGEREEICYQCWECVSNFNAFYQRVYNTHQERRCDIKNAPIEFCGESETANPLAFGGELDALAEDFFATGDVKVEVNELEPLPKLVMIEEPVLEEKGSTTKRASIEQTASTKKRIKKEQRPIASDSDGDIPLAEFLDIKPAVAASKQLPVKAQPLRRSTRRGRPPKKLKTPPDSPSLTPKKEFQSDDEHDNDHDMDFVAAVALLGTEDSASSSESSDSASGNSLPDVEPEERYAEIPKRVVVKPKKYRKRPKPLVPPVRMSREELERRKAQQNEYDEIIFEFFKKLPCHVCNLLVPNFGDMLRHLRMSHNIESGFIACCGRKFHIRRGLAEHVLVHNNPKHFMCTQCGRVFQDSKTLEAHEQTHTNPQTDKRMYPCEKCSKTFTTKAAVAYHNMSKHVPKSDFKYTCPECNKKLPTERKLKEHRRHMHDPETAIICDKCGKTLRTQANLKKHHEIEHSDTPRPKPDPVQCEICGTWLRHISGLKQHMKTVHEPPGGEHRCPICDKTSTNSRALKRHIYHNHQCERKFRCTMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPQTFFSNANMYKHRQRLHRAEWEADRKKPLPPNIMQQAATKKRQASSAVGPAMVMQHAEPTAAITLKQESQQLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01325138;
90% Identity: iTF_01324332; iTF_01326625; iTF_01322834;
80% Identity: -