Sfla001946.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003952975.1
- Location
- RKRM01000179.1:85070-112433[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3 3.1e+03 -2.2 0.0 29 37 10 19 10 23 0.84 2 3 9.7e-10 2.3e-06 27.1 0.0 2 44 346 389 345 390 0.88 3 3 5.6e-19 1.3e-15 56.7 0.0 1 43 708 751 708 753 0.95
Sequence Information
- Coding Sequence
- ATGCACTGCCTATGCTGCTGGCGTTGGCCACACACGACTCTAAGCTTAGAACGCGTCGCTGAGGAATTCATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAGCCAATTGAATATCGACGAGCAACAGCCCATATCACTAACGACGTTAGAAACAGAAGACAGCGACTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAACattacaacagcagcaacaacaatagcaacggAACATTGCAATTTGAAGAAGATTTTGACAACAACCACACATCACACGACCACGACTCAAGTGCAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGATTGCTAACAGTGAACGCTGAAGGCGAATTGGTGgccgaaacaacaacaaccgcgtCCATACACAATTCTAACAACACCATAGGCATAGCTGAGTATCAGCacgacagcgacagcaactCGAGCGCATCACTGCACAATAGCTGCagaaataccaacaacaaatacaataaaaacaacaatattaacaacaacaacaagcatagAGCACGCAACGGAACAAACGCTGTCACGACTCCATCATCAGCGAGTACAATAGAACTTTACAAGCTGTTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAACTGGCACAGTTTACAATGATGGCCGATTTCAATTTGATGAGCACGCTGGccaatcaacaacagcaacagcaacaacaacaacaacaacaacatgctaACTCGGTAACACCAACTACCTCGGAAGTATCTGCCGCTGCCGTCAGTCCCGCACTTAAAGATACACCCAGTCCCAGTGTGGATGCGCCCTTGGATCTAAGCAGCAAACCATCGCCAAATTCATCAGTTAGCGGCGATATAAAGACAGCCAGAGCTCTTTCTGAGTGTGCCACGCCTGTTTCAGCAGCCCGACACAACTACAGTCATGAGGATCTGAATAGTGCTCTGCAGGATGTACTGGTCAGTAAGCTGGGCACACGCAAAGCATCCAAGGAGTACCATATGCCGCGCACCACGCTGCGCAACAAACTGTGCAAAATGTCCCTGGATGCAAAAAGACCAAATGCGCAAACGCCGCCAGagctgcaacagctgcagcattACCTGGCTTTGGAGCATGACGAACAGTCTGGCGAGGAGGCTGGCGATGGCGATAGTAATGCGTCAACGCCAGCGCCAGCGCCCGGCTTTCAAGAGATTGCCCAGCGCATTGTGGCCAACGAGCATATGCGCAAGCTGAGCACCATGTCCGAGCACAATGGCAGCGAGCTGGGCGATGATCTCGAGCCCGCCATGTCACCAAAGCCGTCGCGGACGCCACAGCGAGATGGCACACCAACGAGCATGCAAGcgacagcggcagcagcagctggtgcAGCGGGTGGTAACAACAATGCCACCGGAATGCCAATGCCCATTGATGCCAATGTGCTGTTGCATGCACTGGTTCTTGCATCAGGCATTGGTGTCATTCCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGTTCAAGTCGCTGCTGATGGCCAACAGTGGCGGCATGATGAATGAGACGCTGACATCTGGGCACGAGAGCAATGGCAGTTCCGCGCTGCTGGATCAGCGCctgttgcaacagcagcaacagcagcaactagcTGCTGCCTATCGTCGTCATTTACCAAAGTCTGAAACGCCCGAGACGAGCTCCTCGCTGGATCCCAATGAGGCGTGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAGCAGAGCAGCCAGGATAGTCTgcgcaacaatggcaacaccAGCGGCAGcgagtgcagcagcagcggtggcGGCAACAGCAGTGCGAGTCGCAAGCCCAGCATATCGGTGGCCAAAATGATTGGTGGCACAGACACCTCACGTTTTGGTGCCTCGCCTAATCTGCTTGCGCAGCAACATCACACTGGCAAGGGCACGCGACCAAAGCGTGGTAAGTATCGCAACTACGACAGGGACAGTCTAGTCGAGGCTGTCAAGGCTGTGCAACGTGGCGAGATGTCTGTGCATCGGGCTGGTAGCTATTACGGTGTGCCGCACTCAACGCTGGAGTACAAGGTGAAGGAGCGGCATTTGATGCGACCGCGCAAAAGGGAGCCCAAACCTCAACCAGATCTCGTGGGGCTGACAGGAGCAGCGAATAAGATCAGCTTGACCGCATTGAATAATCTGGACAAACTCAAGtccggcagcggcagcaatgCCAACAACAGCTCTGGCTCGAAGCTGAGCAATGCTttaaagagcagcagcagcagtgcggCAAgcgcagcggcagcagcagcagcagcggcggcagcatcGGTGCCCAATGGCATGAAGTTGCCCATGTTTGATGCCGCACCGCAATTGTCCTTTCAGCCAAACATGTTCTGGCCACAGCCAAATGCTGGTGCCAACTACGGCCTGGACTTTAATCGAAATCCCGAATTTATTAAGTCACATCTGGCCGAGGTTATGCGCAACAGTCAGCTGGGCGTGGCAAGCAACCATCATGGCCATGGTGGCGCCGGCGGTCACATGAAGAGTGCTCTGGAGTTTGCCGAGAACATGTACGACGGCATCATCCGGAAGACGCTCAAGAACGATGTGAACGATGTTAGCGGCAATAGCAGcagtggcaatggcaatggcaatgcgCTGCTGGATCAGTTGCTGGTTAAGAAAACACCGCTGCCATTTACCAATAATCGCAGCAATGACTACCTCGGTGCCGCCTGTTCCACATCCGAAAGCGTTAAACGTGCCGGCAGTCCGATGGGCGCCTATTCAGATATTAAACGCGAACGTCTCAGTCCGATGCGAAGTGCGGAAAGTGGCAGCACGCAAATCTCGCCGAGCACCTCCATATTGCACGAGAAGCTGGCTCAGATAAAGGCCGAGCAGGCCGAAGTTCATGCGGCCAACACCGAGGAGCAGTTATAG
- Protein Sequence
- MHCLCCWRWPHTTLSLERVAEEFMGRRKWKHYQDQLTRSQLNIDEQQPISLTTLETEDSDYQKPLNHRLAQPNGQHYNSSNNNSNGTLQFEEDFDNNHTSHDHDSSATSRSSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAEGELVAETTTTASIHNSNNTIGIAEYQHDSDSNSSASLHNSCRNTNNKYNKNNNINNNNKHRARNGTNAVTTPSSASTIELYKLFTQQAAEMTSMESMAAKLAQFTMMADFNLMSTLANQQQQQQQQQQQQHANSVTPTTSEVSAAAVSPALKDTPSPSVDAPLDLSSKPSPNSSVSGDIKTARALSECATPVSAARHNYSHEDLNSALQDVLVSKLGTRKASKEYHMPRTTLRNKLCKMSLDAKRPNAQTPPELQQLQHYLALEHDEQSGEEAGDGDSNASTPAPAPGFQEIAQRIVANEHMRKLSTMSEHNGSELGDDLEPAMSPKPSRTPQRDGTPTSMQATAAAAAGAAGGNNNATGMPMPIDANVLLHALVLASGIGVIPKLDETQTLGDLFKSLLMANSGGMMNETLTSGHESNGSSALLDQRLLQQQQQQQLAAAYRRHLPKSETPETSSSLDPNEACEDPILKIPSFKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAQQHHTGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKSGSGSNANNSSGSKLSNALKSSSSSAASAAAAAAAAAAASVPNGMKLPMFDAAPQLSFQPNMFWPQPNAGANYGLDFNRNPEFIKSHLAEVMRNSQLGVASNHHGHGGAGGHMKSALEFAENMYDGIIRKTLKNDVNDVSGNSSSGNGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESVKRAGSPMGAYSDIKRERLSPMRSAESGSTQISPSTSILHEKLAQIKAEQAEVHAANTEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -