Sfla006501.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- kn
- Assembly
- GCA_003952975.1
- Location
- RKRM01000079.1:248212-254573[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-140 4.4e-136 454.4 0.0 182 385 4 235 1 239 0.99 2 2 4.2e-07 0.0068 14.6 16.0 424 522 240 337 234 359 0.56
Sequence Information
- Coding Sequence
- ATGGCGCCAAACTTTTTTCTCAAATTCTTTTTGAAGTGCAATCAAAATTGCTTGAAAAATGCTGGTAATCCGCGGGACATGCGAAGATTTCAGgtcgtCATATCCACCCAAGTGGCCGTTGATGGACCACTTTTAGCGATCTCGGATAATATGTTTGTGCATAATAATTCGAAGCATGGAAGACGCGCCAAACGTTTGGACACAACGGAAGGTACAGGCAATACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTACCCACCGCTGCCTGTGGCGACACCCTGTATCAAAGCGATATCACCTAGCGAAGGCTGGACAACAGGTGGCGCCACCGTTATCATAGTAGGCGATAACTTCTTTGATGGCTTACAAGTGGTATTTGGCACAATGCTCGTGTGGAGCGAGCTAATAACATCACATGCGATAAGGGTGCAAACACCACCCAGACATATACCGGGTGTTGTTGAGGTAACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGATCACCCGGTAGATTCGTCTATGTCTCACTCAATGAACCCACAATCGACTATGGCTTCCAGCGACTGCAGAAGCTCATACCACGACATCCCGGCGATCCGGAGAAACTGCAAAAGGAGATTATACTCAAACGTGCAGCGGATCTTGTTGAGGCACTCTACTCCATGCCCAGATCACCCGGCGGCTCGACCAGCTTCAACTCGTATGCGGGTCAATTGGCGGTGAGTGTACAAGACGGCTCTGGCCAGTGGACCGAGGATGATTATCAGCGTGCCCAGTCGAGCAGCGTAAGTCCACGTGGTGGCTATTGCAGCAGCGCGTCAACGCCCCACAGTTCGGGTGGCTCGTATggggcaacagcaacaaccgcGAGCGTTGCAGCCACTTCAAATGGTTATGCGCCTGCACCGAATATGGGCACACTATCCTCATCGCCGGGTAGCGTCTTTAACTCAACATCAATGTCCGTGTCGACGCCATGGCATTCGGCGCTGGTGCAGCATCATCATGTGACCGCCACAGCCGCCACcagccatcatcatcatccgcATCATCATTATCCGCATCCGCATCAGCCCTGGCACAATCCGGCcgtaacagcagcaacagcggcggCAGTTTAA
- Protein Sequence
- MAPNFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAATSNGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHVTATAATSHHHHPHHHYPHPHQPWHNPAVTAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00521135;
- 90% Identity
- iTF_00510322;
- 80% Identity
- iTF_01321653;