Sfla012861.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- Arid4b
- Assembly
- GCA_003952975.1
- Location
- RKRM01000080.1:7907-19981[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-28 9.4e-25 86.7 0.1 1 88 300 384 300 385 0.95 2 2 9 1.6e+04 -5.4 2.2 3 20 2379 2396 2372 2405 0.63
Sequence Information
- Coding Sequence
- ATGCAGCAAGCCGATGATCCACCATCGCTGCCAGTGGGCACCGAGGTGAGCGCCAAATACAAGGGCGCCTTCTGCGAGGCCAAAGTCAGCAAAGTGGTGCGGAATATTAAGGTTAAGATTCTCTACAAGCAGGGACTTGGCTCTGGGATTGTCCCGGACGATGCCATAAAAGCGGCGCCTGGACAGCTACGCGCCGGAGCGGTCGTTGAAGTTCGGCATCCAGATCGCAAGGAATGTGTTGAGGCGACCATAACGAAAATTCAGGATTGCTCCCAATACACGGTCGTCTTCGATGATGGCGACATCACAACGCTACGTCGCACAGCGCTTTGTTTAAAAAGTGGCCGCCATTTCAATGAGAGCGAAACATTGGATCAGTTGCCATTAACACATCCAGAGCATTTCGGTAATCCAGTCGTGGGTGGTCGACGTGGTCGTCGACGTGGTCAGCTCAATGATGGTAGctccgatgatgatgacgagaGCGATGCCAAGGAGGTGGTCAATGAGAAAGAGGAGCATATTGGCAAAGTTGTTTGCGTTGAGACCGAGTCCAAGAAAAAGGACAAAGAGAAATGGTTTCCagctcttgttgttgcaccCACCGCACAGGTTAGCAAGCAGGCAACTGTGCGCATACGTGTTAAGGACGAGTATTTGGTGCGTTCGTTTAAGGATGGACGATATTATACAGTGCCCAAAAAAGAGGCAAATGAGTTTACACGCGAAATAGCAAGCAAACAGGATGTGCCCGCTGTGCAGGCAGCTCTGGAATTTCTTGATAAGAGCATATTGCCTGCCCACTGGGATCGCGACTCTCTATTCGGCTTGTCCAACTTGACCAGCGATGAGGAGGCAGAAATTGAAACGGATTCCTCGGACGATGAGCCGCACGAGGAGAAGGATCTGTTTGTGGCACAACTGTACAAGTATATGGATGATCGTGGCACACCGTTGAACAAGGTGCCATCGATCCAAAGTCGCGATGTCGATCTCTATCGCCTGTTTCGGGCAGTGCAAAAACGCGGCGGCTACAATCGTGTAACCGCCAAAAATCAATGGAAACTAATTGCAATGCGTCTTGGATTCACGCCCACATTTAGTGTTATGAATCTGGTGAAGCAGGCATATAAGAAATTTCTGCAACCCTATGGAGATTTCCATCGCAAGCTCGGCTGTTCCATGCTAATGACGTCGCGCAATTCAAATCGCAGCAAAGGTCGTAGCCTGGTGCGCGCCAATTCGGTAGCTTCGCCCAAACCGGCGGACGTTAAAACCGAgataattaacaaaatatcGATTGCCAATCAGGCACTTGccgcagcaagcagcagcagcacttcaacaacaactgcaactattacatcagcaacagcatctgCAACAgcgacatcaacaacagcagcagcagccgccgccgcatcagcaacaacaacagttgctgctaCAGCAACGAGCACCATAATTTCGCGTTCTGCATCCAGGGCAATCTCTCAATCGGCTGCTGAAGAATCGGGCAATACAAGCGAATCCAGTGTGGTTATGGAGCCAGTTAAGAAGCAACGCAAAGCATCTGCTGCCAGCACTGGCAAAGTCAAGAGTCTTGTCGAAAAATATGAGGAGAAATCAACAGTGTCATctacaagcacaacaacaacagctgttgcatcggcagcagccacagcagcagcagcatctgttACAACAGCAATCAGCACAGCAGCTTCCGCatcggcggcagcagcagcagcagcatctgcggcatctgcagcagcagcagcggcaacaagcGCTAAGGATATCAAGGACGCCGAAGCGGATGTGCCATTGTCAAAGATCaaagctgctgcagcaacaacgcgcaacaacagcatggAAAAGGAACCAAGTGTCACTGGCAGCAATGCATCAAGCAAAGCCGCTTCAGAAACTCAACGCAGTCGCGATGCATCGCCAGCAACGACGTCCACtacatcaacatcagcagctgcagcagcaacaacaacagcggcagcagcaaataCGAAAAAGGAGAAACATCAACAACGCAAACAAGTGGACAAAGGCGAAGAGAAACGCGGTAAACGCAAAAAAGATGAAATAAGTGTAGAAAAAATCGATACAGGCGATTTTGTCGTTGGCATCGGTGATAAActcaaagtcaattatcacGAAAAAAAATCGCCCAGCTCCCATGGCAGCACCTATGAAGCGAAGGTCATTGAGATCGGTGTCCAACGCGGTGTACCCATGTACCTGGTGCATTATACCGGCTGGAACAATCGCTACGACGAATGGGTGCCACGCGAGCGCATTGCCGAGAATTTAACTAAGGGCTCCAAGCAGAAGCAACGAACCATTAGCACCAGCAGCGCCAATAGTGGCGGAGCACCCACCCAAGCGCCTAATACTGGCCAATCGGCAACAAAGGATGCGTCTGCCAAAGGAGATcgcgaacaacaacagcagccaccacCAAGCGCTGGCACCGGCGCCACCTCAATGCTGCATTCGGCATCGAAAACgccaacaacatcagcagccgCATCAACGGGTGCTGGAAAACGCGGACGCGGTCGCAGCGATTCAATGCCACCACGCTCCACAACACCCTCATCGGTGGCCTCGAACTCAAGTCGCACCAAATCGCCAGCTGCCTCCCAACCGCAGCTGAAACAACATAAGCGTCCAACGCGCACTATTCTCGCTGCAAGCagcaccggtagcagcaataGTAATCTACCACGTCGCATCTCTGCCTCGGCTTCCATATCGGCCAATGTGTCCGATGCGTCGATGGCCAGTGAAACAGACACCGATTCCGATGAGCCAGTGCGTCGTCCCAAGCGGCTCAGTGTCaaggagcagcagctgatCAAAACgaaagcagctgctgctgctgcggccgcTGCAGCTAGCAAAAAGGCTGCCTCGCGACGCACCAGCGAACCAAGCGAGGAAAGCGACGAAGATGAGGATGAGCAGCCAACGCCAACACCCACTAAACAACAGACGCCAGCAGCTGTTGCACAGCAATCAAAACCAGTGCAGCGTCCGCGTGCTGGCAATCGTGCAATGAGCAGCGGAGCAGGAGTAGCCGCTGCTACTGCAGCAGCTTCATCTACTGCTGCGGCTGGCAAAGGACAGGGACGTGACTATGATCTCAGCGAGATACGTTCAGAGCTGAAAGGCTTTCAGTTGCAGGAGCGCAAGGATGCACTTGTCAAAAGTGAACCGGGTGATGGCCAAGTAAAAACCGAAACCAGCAAAACTGGCAGCTCCACTGAGCAATCGTCGGAAACCGATTCGTATATTGATGAGGATTCCCAATCATCCGATAAGCTTGAGTATCGCAAGCAAGCCGAAAAGTGTAAACCcaaaataacagcagcaattgcTGTCAATCCCAGCAACATCTTATCTAGCGATCTTAAAAAGGAAATATTTCAGTTGCATGCAACTGCATATGATGCTGGTGATGAGGAGCGTAAACCTTTGAAAGCAGAGCCCAAAGAGGAGACGCCGTCGAAGCCATTTCACAGTGGTGCCGACATTaaaccgacaacaacaataacacttATTGCACCAGCGCGTTTTGGCAACAACGCCACCAATCCAAGCGCCAAATGCACATCGGTTATTGTGGAGAAGCCGTTGACGCTGATCAAGAAACAGACAGAGAAACAGGAAACGGCAGCAAGCAAGAAACTTGAGTTGCtaaagaagcagcaacaaactgtTGCAAGCAGCACCAGCACAGATGCAGCTAAAAAGTTTGTTGAACCTGTGCTGCACAAAGAGACGGCCACATTAAAGGTCGAATTGCCGGCAGCATGTTCACCATCCTCATCCAGCTCCTCTTCCAGCTCATTCTGttccagcagcaacaattcaaCTACAACAACCGTTAGCTTGAGCAGCTCCTCGGCAACACGTTCGCTGCCGGATATGAGTAAATTGGAAATAAGTAgcggcacaacaacaacaacagcagcaacaacatcaacaacagcagcagcagtaacaacatcaacagcagcagcagctggaggAGCAACAGCTTCGGGTAGTAAGGAGACCAAATACAGCAGCATTTGCAGCGGCAGCGGTCTCAGTGGCATCAAGCTGCTCTCATCGGATGTGTATGAGTTCAAGGATACGGAACCATTTGAATTTGAGAAACGTATCTCACCTATGGCTGCAATTAGTGgaagtgcaacaacaattgtagTGCCAGCACAGCCAGCAGCTGTTACCAGCAGTAGCAGCGCCAGTTGCAGCAAAATtattgcaacaacagctgccgcagcaactacaacagcaacatcgaTTGCAGCAGGCTTTGCTGGACGTAAACAGACGCTGGTagcgacgacaacaacagcgacgacGACAATTACTACGAAACCCAATCCAATTGATCAGCATAAAATTATGTTGCACGATCAGCTTGTCTGTTCCGGCATGCTAGGAGGGCCGGGAACGGGCGCAGGAGTGGGAGCGGTAACAAACAAGACCAAAAAACGTTGTTCGCCTCTCAAAGAAGCCACACTGCTGACCAGCTCggataagcagcagcagcagcagcccaaaCAGCTTAAACTGGAGCCACAGTCTATAATTGTTGAGCAATCGCCGCCAGCAGCTAGTCCCAATATCAAGGTGGCTGCTGCAACAACTGGTTCGAAAACTCTATCATCAGCGGCAACGGCAAACGTTGCTGATTTGATGGGAAAAGTGCAGCTAACGCCAGGTTATGCCACACCATTTGATGTATTGCGCAAATCGCCCAGTTTCAACTTGAATATAACAGCTCTTAACGAAGAACTAGCGCAAACGGTGCAGGAGACAACGCGTGCTTTAACCGATGCACTGCAACCGCCAACAACGCCAGCAACACCACCAGCTGCAGTAGCAGCAGTTGCAAcggttgcagcagcagcagctgtaattatgccaactgctgctgctgcagcagcggcaacaccaacaatcGGTGTTCCCATGTCACCAAAGATGAGCACACCGCCACAAGGCATTGGCATGACTAAAACAGctggaggaggaggagcacATCAACAACGTCAACAACTAGTTGCTGGCAGTCCATTTATGGAGACGCGCAATGTATTTGAATTGAGTACATCGAATGAGGGCAGCGGCTATAGTTCCGGCGAATCGAACAAGGACAACAAACTGGAGAAGTTGGagaatgttaaaatattgctGGCGGGTGCAGCAGGTCCATTCGATTTGGATGCTGTCAAATATGAGCAAAAGCCCAGTTCCATAGCGGACAAGGTGCTCAAAGCCATTAGCCAAAAGAAAGAGGAATCTGAACAGATCAAAACTAAAACACAAATCGAAATGGATAAAGAtgatcagcagcaacagttgcaaccaCAACCGAGCAATATTAAGCTTGAGCCAAGCAGCACAAATCTTAAGCTCGACACATTGAAGATGCTCAGTGAGCCGCTCAAGATACAAACGGGTGCATCGTTACTCACCGATTTATATCAACgtgcaacaagcagcagcaatagcccCGAAACCAAATCCCTGCTAGACTCCACGCTGGCGGCCAAGAACAGTGAACTAAGTGAAACGATACAGAAACTAGAGTGCGCCATACAGCAGCGCAAGACACCAGTGGCTGGACAATCTCTAGCCTCATCCATAGCTGGAACACCGCCGGTGACAAGTACCAGTGCAATGGGTGGCAACAATTTCTCGGATGATGAGTCTATGGATAGCACCGATTCAGAGCAACGTCTGGTCATTGAGGATGTTATCATTGAGGAGCCCAGCACAATTAGTATGTGTGAGCTTAAGAGCTCTGAATCTGAGGAGGCTGCATCCAATAGTTTGACCAACAGTCCACCCGTTCAACTCGAACTTGATATGGCTGCCAGCAATAAACAGTTGTCGGGTGTCCAAGCGCCAATTGCACTTAAGCCCATGATGCTATTGCAGCCAGCGACTGGACATGTGTCATCCTTTGGTCTCAATGACTATACAAGTAGCAACATCACGGCATCAGCAACATCACTAGTAGGATCAgaagcaccagcagcaggagcagcagcagctggacCACAGTTACCAACATCAGTTGGTAAAATGGGTGGTGCTGGCGCTGGCACCATTGTTGTGCCCATTATTGTGCCCGAAATTCCTGTCTCGGTTGTGGTTGCAATGCGTCAGAGTCCAATAAATGTGTGCACCAGTGACAGTCCCGCCTCACCGCCGCCCGAGGACAAAATGGCAACGAAATATCCAATGCCATTGGATCAAACCAATACCAATTCAATTGTACTCTATAGTCCGCCACGTCTCTCAGATGAGTTGGCACATGGCGATGGGCATCATCATGTGCCATCATCATATCATCATGTACCCTATGCGCTGCAGCAGGCCAAGGAGGTGCAACCAATGTCACGTGTCTCACCAGCTGCTGCCAGTCCAGCTTTGATCAGCGATCTTGCCCACAATGAGGCGGCCATTAATTTGCTGTGTGAGGAGACTATACCGGGCAGTCCGGCTCCCAACTATACCAGCAAAGATGAACAAATGATTACTAGCACTGTTTCGGTTGCAACAACACAAGcgggagcagcagcagtagcagcaggtGCAATAACAATTGCCACCTCATCCATATCAGGCATAGCACCATTATCGCCTGatacaccaacaacaacaactactttGCAACGTGCTACACCAATTAATCAGCAACCATCGACCGCTGCCTCCGTGTCGCCCAATAGCTCGCCGGATTCGCCAGCTAGCCAGGATGATAGCAGCGAGGAGACAGGCAGCAGCAGTCTGCACAGTGCAGCCAAAAAATATGCTGAGCTCGAGAGCAATGTGCTCGGTGGCAGGCGCAAACGTCGCTCCAAACCAAGCGAGGCAGCAATGCAATCTTCAAATGTACAAATGAGTCCCACCACAGCCGCCGAGCTTTATGTGCTGGCCAAACGCCGGCGACAGCAATTGAATATCAGTATGcgcaaaccaacaacaacaacagCTGGCTCCGATACCGATGATACTTCCGATAATGTTGTGACCACACAGCGTCATAGCACACGTCAACAGATGttgccgcaacaacaacagcaacaacaacagcagcaacaacaacaactgcaacaacaacaccaacaacaccaacaacagctacaacagtTACAATTACCAACACAATCAGTACCAACAGCAACTGGTGTGCGTCCATGTCCCTATAACTTTCTCGTTGAATTGGATCCCTCGCTCAGCAACGATCAGTGCGTATCGATATTGCGCAAACAAATCCAGGATGTGCGCAAAGCCTACTATACCATTAAAAGTGAATTGGCTGTCATCGATCGAAGGCGCAAGAAGTTGCGCCGTCGGGAACGTGagaagaagcaacaacagcagttgcAGGGACAGCAACAGAGTAAAGTTTGCACCTAG
- Protein Sequence
- MQQADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKILYKQGLGSGIVPDDAIKAAPGQLRAGAVVEVRHPDRKECVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREIASKQDVPAVQAALEFLDKSILPAHWDRDSLFGLSNLTSDEEAEIETDSSDDEPHEEKDLFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAKNQWKLIAMRLGFTPTFSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPADVKTEIINKISIANQALAAASSSSTSTTTATITSATASATATSTTAAAAAAASATTTVAATATSTIISRSASRAISQSAAEESGNTSESSVVMEPVKKQRKASAASTGKVKSLVEKYEEKSTVSSTSTTTTAVASAAATAAAASVTTAISTAASASAAAAAAASAASAAAAAATSAKDIKDAEADVPLSKIKAAAATTRNNSMEKEPSVTGSNASSKAASETQRSRDASPATTSTTSTSAAAAATTTAAAANTKKEKHQQRKQVDKGEEKRGKRKKDEISVEKIDTGDFVVGIGDKLKVNYHEKKSPSSHGSTYEAKVIEIGVQRGVPMYLVHYTGWNNRYDEWVPRERIAENLTKGSKQKQRTISTSSANSGGAPTQAPNTGQSATKDASAKGDREQQQQPPPSAGTGATSMLHSASKTPTTSAAASTGAGKRGRGRSDSMPPRSTTPSSVASNSSRTKSPAASQPQLKQHKRPTRTILAASSTGSSNSNLPRRISASASISANVSDASMASETDTDSDEPVRRPKRLSVKEQQLIKTKAAAAAAAAAASKKAASRRTSEPSEESDEDEDEQPTPTPTKQQTPAAVAQQSKPVQRPRAGNRAMSSGAGVAAATAAASSTAAAGKGQGRDYDLSEIRSELKGFQLQERKDALVKSEPGDGQVKTETSKTGSSTEQSSETDSYIDEDSQSSDKLEYRKQAEKCKPKITAAIAVNPSNILSSDLKKEIFQLHATAYDAGDEERKPLKAEPKEETPSKPFHSGADIKPTTTITLIAPARFGNNATNPSAKCTSVIVEKPLTLIKKQTEKQETAASKKLELLKKQQQTVASSTSTDAAKKFVEPVLHKETATLKVELPAACSPSSSSSSSSSFCSSSNNSTTTTVSLSSSSATRSLPDMSKLEISSGTTTTTAATTSTTAAAVTTSTAAAAGGATASGSKETKYSSICSGSGLSGIKLLSSDVYEFKDTEPFEFEKRISPMAAISGSATTIVVPAQPAAVTSSSSASCSKIIATTAAAATTTATSIAAGFAGRKQTLVATTTTATTTITTKPNPIDQHKIMLHDQLVCSGMLGGPGTGAGVGAVTNKTKKRCSPLKEATLLTSSDKQQQQQPKQLKLEPQSIIVEQSPPAASPNIKVAAATTGSKTLSSAATANVADLMGKVQLTPGYATPFDVLRKSPSFNLNITALNEELAQTVQETTRALTDALQPPTTPATPPAAVAAVATVAAAAAVIMPTAAAAAAATPTIGVPMSPKMSTPPQGIGMTKTAGGGGAHQQRQQLVAGSPFMETRNVFELSTSNEGSGYSSGESNKDNKLEKLENVKILLAGAAGPFDLDAVKYEQKPSSIADKVLKAISQKKEESEQIKTKTQIEMDKDDQQQQLQPQPSNIKLEPSSTNLKLDTLKMLSEPLKIQTGASLLTDLYQRATSSSNSPETKSLLDSTLAAKNSELSETIQKLECAIQQRKTPVAGQSLASSIAGTPPVTSTSAMGGNNFSDDESMDSTDSEQRLVIEDVIIEEPSTISMCELKSSESEEAASNSLTNSPPVQLELDMAASNKQLSGVQAPIALKPMMLLQPATGHVSSFGLNDYTSSNITASATSLVGSEAPAAGAAAAGPQLPTSVGKMGGAGAGTIVVPIIVPEIPVSVVVAMRQSPINVCTSDSPASPPPEDKMATKYPMPLDQTNTNSIVLYSPPRLSDELAHGDGHHHVPSSYHHVPYALQQAKEVQPMSRVSPAAASPALISDLAHNEAAINLLCEETIPGSPAPNYTSKDEQMITSTVSVATTQAGAAAVAAGAITIATSSISGIAPLSPDTPTTTTTLQRATPINQQPSTAASVSPNSSPDSPASQDDSSEETGSSSLHSAAKKYAELESNVLGGRRKRRSKPSEAAMQSSNVQMSPTTAAELYVLAKRRRQQLNISMRKPTTTTAGSDTDDTSDNVVTTQRHSTRQQMLPQQQQQQQQQQQQQLQQQHQQHQQQLQQLQLPTQSVPTATGVRPCPYNFLVELDPSLSNDQCVSILRKQIQDVRKAYYTIKSELAVIDRRRKKLRRREREKKQQQQLQGQQQSKVCT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -