Sfla007435.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- grh
- Assembly
- GCA_003952975.1
- Location
- RKRM01001896.1:6868-19148[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.82 4.5e+03 -3.5 1.0 15 15 288 288 266 306 0.50 2 2 3.3e-11 1.8e-07 30.5 0.0 24 69 419 464 405 476 0.83
Sequence Information
- Coding Sequence
- ATGCAGGATGCAACGAGCAGTTATGCCATCTCCTACACGGACTGGATAACGGAATCACGTCAATCGCCACCGCATTACACGTATGAGCCGGCAAAGGATGCAACACATTTAGTACAACATCTGCCACTGACCGCCGCTGGGCTCTTGCAATCTGTGGCTGCCGAGATACAGCTAAGTGAACAGCATTcgacaccaccaccaccagctcCACAGCCCCCTCTACCACACCCACCACAGGCACACGCCTCCAATGCCAGCTATGCTGTCTACAGCTACTACCGGCCAGATGTCGATGTCGAAATATATCGCGTGGATGCAGCTAGTACTGAGGTTGaggcaactgcaactgcaactgcatttGAAATAGGCGATAAAAGAGCTGCTGCAACAAGTGAAACTGCAACTAGTCCCGTCAGAGCCACACCAGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAACACCGGCCCCAGCACACAGCAGAGCTCACTGCAAGCTCAGAGTCCCAGTCCCGGGCCGTATATCACAACGGACAGTTATGGCATGTATACGGCAACACGACTGCCGCCCGGCCCACCACCCACCACAACATTCATAACGGAACCCTACTACCGCGAATACTTTGCACCCGATGGTCAGGGTGGCTATGTGCCCGCCGGTACGGCGCGTAGTCTCTACGGCGAGGATGTATCCATTTCGGCAGCTACACAGCCACAGCCCGTTGGGGGCGTTTATGAGGCACGCTTTACCAGCAATGTTCCCTCCACCACCACAGTGCTTACCAGCAGCAATGCACACCACAGTCACCAcagtcaacagcagcagcagcagcaacagcaacagcagcaacaacagcaacaggagcagTCGGGTAAAAACGGCGGTACTCCGCTATATGCCAAGGCAATAACGGCGGCGGGTCTGACCGTCGACTTGCCCAGTCCCGATTCGGGCATTGGCACAGATGCCATAACGCCGCGGGATCAAAATCACATACAGCAGTCCTTCGATTATACGGAACTTTGTCAGCCGGGTAGCTTAATTGATGCTAATGGCAGCATACCCGTTTCGGTTAACAGCATCCAGCAGCGCACTGTGGTGCATGGCAGCCAGAACAGTCCAACCACATCACTGGTGGATACCAGCACAAATGGCTCGACACGTTCAAGACCCTGGCACGACTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATAATTTGGAGAGCCCGATCAGCTCGTCACAGCGTCGGGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATAACGCTGGAATATGTGCACGATGCGGATAAGCCAATCAAGAATACAACTGTTAAGGTAAGTCCATTGACTATATGA
- Protein Sequence
- MQDATSSYAISYTDWITESRQSPPHYTYEPAKDATHLVQHLPLTAAGLLQSVAAEIQLSEQHSTPPPPAPQPPLPHPPQAHASNASYAVYSYYRPDVDVEIYRVDAASTEVEATATATAFEIGDKRAAATSETATSPVRATPDLEMYATTGGTQIYLQTSHQNNTGPSTQQSSLQAQSPSPGPYITTDSYGMYTATRLPPGPPPTTTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSISAATQPQPVGGVYEARFTSNVPSTTTVLTSSNAHHSHHSQQQQQQQQQQQQQQQQEQSGKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGSLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKVSPLTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -