Sfla005971.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- grh
- Assembly
- GCA_003952975.1
- Location
- RKRM01000043.1:100130-131001[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3 1.3e+04 -4.9 1.5 20 28 39 47 26 63 0.43 2 4 0.15 8.3e+02 -1.1 0.9 113 145 153 185 136 195 0.64 3 4 3 1.6e+04 -12.4 14.7 83 109 232 258 159 310 0.57 4 4 2.5e-63 1.4e-59 201.0 0.5 24 221 412 604 398 606 0.94
Sequence Information
- Coding Sequence
- ATGATGCAGGATGCAACGAGCAGTTATGCCATCTCCTACACGGACTGGATAACGGAATCACGGCGCTATAGCCTGGATCAGCAGCAAGAAACGCCACACCAAcaccagcaccaacagcagcaacagcagcagcagcaacagcatcagcatcaagAGCTACAACATCcgaatcatcatcatcttcttaatcatcatcatcatcatcattatggTAGTCAATCGCCACCGCATTACACGTATGAGCCGGCAAAGGATGCAACACATTTAGTACAACATCTGCCACTGACCGCCGCTGGGCTCTTGCAATCTGTGGCTGCCGAGATACAACTAAGTGAACAGCATTcgacaccaccaccaccagcaccacaaCCCCCTCTACCACACCCACCACAGGCACACGCCTCCAATGCCAGCTATGCTGTCTACAGCTACTACCGGCCAGATGTCGATGTCGAAGTCGATGACGTCGATGTtgatcaacagcagcagcagcaacagcaacagcagcaacaggagcagcaacagcaacaagatcAACAGCTACTGTGGAGCAATCCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATCgcaaaatgaaattcaagGCTTTCTGCTTGGTTCACACCCCTCATCGTCGGCCGCCACAGCCGGCGTTGTttccacaacaacaatctcaaatcagcaacatcagcaacaacaacaacaacaccagcaacagcagcagcaacagcaacatcaacaacaacaacagcagcagcagcagcagccgccacaTCCCAGCGATATTGTGACCATAACCACAGCGGGTGTGGGGAGCGCTGGCTCAATTGTCTCTGCAGccgtgcaacaacaacagcagcaacaacaacaacaacaacaacaattgctgaGCATCAAACGTGAGCCCGAAGATCTGAGCAAGGATCCGAAGAATGGGAATCTGGGCGCCGCAGCAAACGGTGGCGGTTCAGTCATATCGCAAAAGTCCTTCGATTATACGGAACTTTGTCAGCCGGGTAGCTTAATTGATGCTAATGGCAGCATACCCGTTTCGGTTAACAGCATCCAGCAGCGCACTGTGGTGCATGGCAGCCAGAACAGTCCAACCACATCACTGGTGGATACCAGCACAAATGGCTCGACACGTTCAAGACCCTGGCACGACTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATAATTTAGAGAGCCCGATCAGCTCGTCACAGCGTCGGGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATAACGCTGGAATATGTGCACGATGCGGATAAGCCAATCAAGAATACAACTGTTAAGAGTGTGATCATGCTAATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGatACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAAAGCTCTGCCAAGATCAACATTGCCGTTCAGTGTTTGAGCACGGACTTTAGCAGTCAAAAGGGTGTTAAGgGTCTGCCGTTGCACGTACAAATCGATACTTTTGAGGATCCGCGGGATGCGACAGTCTTTCATCGTGGCTACTGTCAAATAAAGGTCTTCTGCGATAAGGGCGCTGAGCGTAAGACGCGCGATGAGGAGCGTCGTGCCGCCAAGCGTAAAATGACAGCAACTGGACGCAAGAAGCTGGATGAGCTCTATCATCCGGTCACCGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTGCTATTCTCGCCCGCTGAGGATATGGAAAAgAGCTTCTATGGGCACGAGACTGACTCGCCGGAGCTGAAAGGTGCATCACCATTCTTGTTGCACGGTCAGAAGGTGGCCACGCCCACGCTCAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAGAAGGATCATATATTGGATCAGAGTATGTTAACCAGCACGCCCATGTCCGATTTTGGGCCACCTATGAAACGGGGCCGAATTACACCGCCAACAACGGAACGTGTCATGTTGTATGTGCGGCAAGAGAACGAAGAGGTCTATACACCGCTCCATGTGGTACCTCCCACCACAATTGGCCTGCTAAACGCGattgaaaacaaatacaaaatctcaACAACGAgcataaataacatttatcGCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGACATGATATCCTTTTACTGCAACGAGGACATTTTTTTGCTGGAAGTGCAACAAATCGAGGATGACCTGTACGATGTGACGCTCACGGAGCTACCCAATCAATAG
- Protein Sequence
- MMQDATSSYAISYTDWITESRRYSLDQQQETPHQHQHQQQQQQQQQQHQHQELQHPNHHHLLNHHHHHHYGSQSPPHYTYEPAKDATHLVQHLPLTAAGLLQSVAAEIQLSEQHSTPPPPAPQPPLPHPPQAHASNASYAVYSYYRPDVDVEVDDVDVDQQQQQQQQQQQQEQQQQQDQQLLWSNPSSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATAGVVSTTTISNQQHQQQQQQHQQQQQQQQHQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGGGSVISQKSFDYTELCQPGSLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRITPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -