Scyr009562.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza cyrtandrae
Gene Symbol
srp
Assembly
GCA_035044605.1
Location
JAWNNS010000640.1:12142349-12155208[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-18 8.7e-15 54.1 2.0 1 35 918 951 918 952 0.97

Sequence Information

Coding Sequence
ATGACAAAAACCAGCAAGGCAAAAGAAAAGGATAAAAGTAGTACTGCAATGCCGCGTTTGCCAAATAGTTTACTAGCGAGTGCCGCCAAAATGAAGATTACCAAAGCCCTGGCCAATACCAAGAAGCAAGCAGTTCAAAAAGGCACCGGCgacaaagcaacagcaacaggatcAAATGCGGCATTAGCCACAGCAGCACtagcagcgacaacagcatACATTCAACAGGCGGTCGTTGTGAAAGAGACGGCAATAGCGGCATTGCAGGAGAACGGCAACGCTGCGCACCAGCAGTCAGCAGCGACGTCGACTTCGCCGTCGCCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCATACATCAGTTGCCAGCGaaacagcaaagcaaacgGTTACCagcgcaacaacagcaacggcgacaacaacaccaacaatttcaaattcaacGATCGGTTTTGTTTATGATGAGAACAACGTAGGTTGTGACgtcacaaacaaaattattgcaGACGAAACggcaaataataacaattcagATAAAGTCGAGTCCAAAACCGAAAGCGAAACGAAGCTAGTTGTAgagacagcaacaataacacaagCTGCATCAACAGCGAGcgataaatattacaaaatcgTTGATAAGTGCAAAAGTGAGATAAGTGATGAaaacacaacatcaacaacatcagctaTTTTGCCGGCTGTAGTGATAAATAATAGTAATCAGCAAAGCGTCGCGAGTGAAAGTGttgacaacaaaatcaaaaCCAACTATgcgcatcagcagcaacaggccgaacagcaacagcagcaacaaatttatgAGCAGCAACAATATCTTCAACAGCAATTGCtaaaccaacagcagcagcaacatcaacagcaacaggaacaacaacagcacgcTAGCTGGTTGGCCTTTAACAACTGTGCCTACGATTTAACAAGTAGCagcagtgcagcagcagcagcagcgctggCCTCACAGCAACTGTTGGCGCATTTTCcctatcatcatcatccccACGCGCATTTGTACGAGccacagccgcagcagcagcagcagcagcaacatcaaggcgccaacggcaacagctgcagcagcacgGATCCCATAATGCGCAACAACTTTGCGCTGTACAGCGTTTATGGTGGTGGAGGAGGTGGCggcagtggtggtggtggtggtaccATAACGCCCACCACACacgagcaacagcagctgcagcaacatgttgccgcTGTGGCAACGGCAGCGGCCAATTCGGTTATCGCACACACAACGCACGCACAAACGCCCAATATCGATGAGGTCATCCAGGATACACTAAAGGACGAGTGCTTCGATGACAATCATAGCTCCAGCTATCACATGTTGACTGCCGTCTCCGATTTGCAGGTGTTGAAAGAGGCAAATGCTACCATTTATTCCATGACGCACGATcagttgctgcaacaacagcagcaacagcatcaacaacatctgcaacatcatcaccatcatctgcagcaacagcaacaccagcagcagcagcagcaacagcagcaacagcatgcGCATCTTCATCAACAACACCATCATCACAACAATCCGGCCAGTTCGGTGGGCGGCGATTCGCCATCTCcttcacacacactcgcaacAGCTGCCCATGCCAGCGATGTGGCAACGCTACAGAGCTTTACCCAACTAACAAGAGCGTCTCCCAGCAGCGGCTTGCATCCCGATAGCTACGGCAGCTTCTCACCCGAACATGCCAGCTACTTTACCACACAGCTCAGCCCAGTGCTGACTAGCTCTGTCTATGCAAGTCCTTTGCTCGCTTCAGCTGCCAATGGCTTGCAGTATGGCATGCAAACGGTGTCCTCACCCACCCACACGCACGCCCatctacagcagcaacatcatcagcaccaacaacaacagcaacagcagcatcaacaacaacagcaacatcacaACTCGACAAGCAGCAGTCCTGGTCCAGTGGGTCAACTCCACACGAGTGGCTCAACGATAACTGGACACAGTTCCCTGCTAGACGATGGCTATAACTCACCAAAGAGCAGCCACAGTGGCAACGGCGGTGCCAGTGGTGGCACCCTGCCAGCCTTTCAACGCATTGCACCCACCAGCGTTGGTGCTGGCTATGGCAACGGCGTAGCCAATGGATCTGGCAGTGTTGCCGAACGAGCTGGCTACGCATCGCTACCCAATTATCGCACTCACGGCGATGTATGGAGTAGTCCTTTTGAAGCAATTGGTTACGCGTCCAGTGCCAGCAGCCAGGGACAGTTGGGTGGCAGCGGTGCAGCGGTTACAAATGTGATACGCAATGGACGTGTTGTTGCcgccgctgcagcagccgctgctgctgttgatggtgCCGCCAATGCTGTCGATCCTGCACGATCATTTCTCACCAATGCCGCTCATCTCTCCGCATCGGCATCGCTAACAGCAACATTACTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTCAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTACCCATATAACGTGACCACCGGTAGCCGCAGTAAGGCCACAACAAATGCCAACAGCGCTGCCGGTTCCGGCGCAGGCTCAACGTCAGCGACAACGTCGTCGTCAGTGACTTCAACGGCGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCCCGACGTGCTGGCATGTCCTGTTCCAACTGCCAGACAAGCTATACATCGCTGTGGCGTCGCAATCCTGGCGGCGAGCCCGTTTGCAATGCCTGCGGTCTCTACTTTAAGCTGCACAATGTGGTGCGTCCACTGGCCATGAAGAAGGACACCATACAGAAACGCAAACGTAAGCCAAAGGGCTCCAAGAGCGAAAAGTCGAAGAAATCAATGAGATCTTCCCAAACGGCTTCATTGGTTGCCACAAACGCCAACAATGCCTGCCACAATGTGGGCATGCAACTAGAGGCACATGGTCAGCAAATGGATGTCAATGATGAAATGAAACCACTTGCATATATGTCATCATACGCatcgcagcagcaacagcagcagcaacagcagcaacaacagctacagcagcaacagcaactaaacATTGAGCAACATTCATCAGCGGCCAGCTCACCGCAAAGCATGGCATCATCCTCATTATCACCCAATGCAACAtctcaacaacagcagcagcagcagcaacaactttgtGCTGGTCTGGACATGTCTCCCACATCCTCCTATCAAATGTCGCCCATtaacatgcaacagcaacagcagcagcaacagcaatcatgcagcatgcagcattCACCAACTACGCCCACATCAGCAATGTCACATTCCATTTATTCCACACCATCGCCAACGcagcttaacaacaacaattcactATTTaatcacaacaataataataacaacaacgatagcaatgagaataacaaacaaattatacaGAAATATCTGGAAGCTCAACAAttgagcaacagcagcagcgatcaACAATTATtggcacagcagcagcttatGCACCTGATGCCGAACTCCATTacggcagcagctgcggcagcagcagcagcagcagcagcagcggcggcggccGTCAACACGGCGATCAAATCGGAGTTAGCCGCCAACACCAAcatgaacagcaacagcagcaaacaattggctgccacaacaacagcaacaacaccgaCCACGGCATCGAACACACTATCCTCACTgagccacaacagcagccacattATAAACCTGCAAAATCCATATCAACAACTTGGTCAGACGGAGATGCCCTTGTGTAAATCGGCGCTAAGCGGACGCACCTCTTCCCCCTACTATCATCTAGCCGAAGAGGAGCAGCCGGCCATCATTAAACTGGAGCAAATggatcaacagcagcagcagcagcaacaacatcaacaacatcaacatcagcaacaacagcaacaccagcaacatgATGAAATGTTGCTTAGTCGCTCAACATCCATTGACGAGCACTACGAACTGGCCGCCTATCATCgccaacagttgcaacagcaacagcagcaacataatctacagcaacaacatgagCAACAAATTGCCAGCTATGCATTGCATGCTGCtgcacagcagcaactacaTGAATTTGGACGCAAATATGGCGTCGAGCGCGAGACAATTGTTAAAATGGAGTAA
Protein Sequence
MTKTSKAKEKDKSSTAMPRLPNSLLASAAKMKITKALANTKKQAVQKGTGDKATATGSNAALATAALAATTAYIQQAVVVKETAIAALQENGNAAHQQSAATSTSPSPLATANLSSTFESKAHTSVASETAKQTVTSATTATATTTPTISNSTIGFVYDENNVGCDVTNKIIADETANNNNSDKVESKTESETKLVVETATITQAASTASDKYYKIVDKCKSEISDENTTSTTSAILPAVVINNSNQQSVASESVDNKIKTNYAHQQQQAEQQQQQQIYEQQQYLQQQLLNQQQQQHQQQQEQQQHASWLAFNNCAYDLTSSSSAAAAAALASQQLLAHFPYHHHPHAHLYEPQPQQQQQQQHQGANGNSCSSTDPIMRNNFALYSVYGGGGGGGSGGGGGTITPTTHEQQQLQQHVAAVATAAANSVIAHTTHAQTPNIDEVIQDTLKDECFDDNHSSSYHMLTAVSDLQVLKEANATIYSMTHDQLLQQQQQQHQQHLQHHHHHLQQQQHQQQQQQQQQQHAHLHQQHHHHNNPASSVGGDSPSPSHTLATAAHASDVATLQSFTQLTRASPSSGLHPDSYGSFSPEHASYFTTQLSPVLTSSVYASPLLASAANGLQYGMQTVSSPTHTHAHLQQQHHQHQQQQQQQHQQQQQHHNSTSSSPGPVGQLHTSGSTITGHSSLLDDGYNSPKSSHSGNGGASGGTLPAFQRIAPTSVGAGYGNGVANGSGSVAERAGYASLPNYRTHGDVWSSPFEAIGYASSASSQGQLGGSGAAVTNVIRNGRVVAAAAAAAAAVDGAANAVDPARSFLTNAAHLSASASLTATLLDADFFTEGRECVNCVAAESGGDFYKTYPYNVTTGSRSKATTNANSAAGSGAGSTSATTSSSVTSTALDEHVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYFKLHNVVRPLAMKKDTIQKRKRKPKGSKSEKSKKSMRSSQTASLVATNANNACHNVGMQLEAHGQQMDVNDEMKPLAYMSSYASQQQQQQQQQQQQLQQQQQLNIEQHSSAASSPQSMASSSLSPNATSQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQQQQQSCSMQHSPTTPTSAMSHSIYSTPSPTQLNNNNSLFNHNNNNNNNDSNENNKQIIQKYLEAQQLSNSSSDQQLLAQQQLMHLMPNSITAAAAAAAAAAAAAAAAVNTAIKSELAANTNMNSNSSKQLAATTTATTPTTASNTLSSLSHNSSHIINLQNPYQQLGQTEMPLCKSALSGRTSSPYYHLAEEEQPAIIKLEQMDQQQQQQQQHQQHQHQQQQQHQQHDEMLLSRSTSIDEHYELAAYHRQQLQQQQQQHNLQQQHEQQIASYALHAAAQQQLHEFGRKYGVERETIVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01328262;
90% Identity
-
80% Identity
-