Basic Information

Insect: Scaptomyza cyrtandrae
Gene Symbol: ken1
Assembly: GCA_035044605.1
Location: JAWNNS010000473.1:7500980-7503364[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.065 4.8 7.9 5.9 3 23 251 271 249 271 0.96

2 12 0.00029 0.021 15.3 0.5 1 23 277 302 277 302 0.94

3 12 0.0019 0.14 12.8 1.2 1 23 309 334 309 334 0.93

4 12 0.00092 0.068 13.7 4.0 1 23 344 366 344 366 0.97

5 12 0.0018 0.14 12.8 2.2 1 23 373 395 373 395 0.97

6 12 0.0071 0.52 10.9 0.5 1 23 401 423 401 423 0.97

7 12 0.052 3.8 8.2 2.6 1 23 429 452 429 452 0.97

8 12 0.019 1.4 9.6 4.1 1 23 458 480 458 480 0.95

9 12 0.009 0.67 10.6 2.3 2 23 487 508 486 508 0.96

10 12 0.00018 0.013 16.0 0.8 1 23 597 620 597 620 0.95

11 12 0.00036 0.027 15.0 0.8 1 23 626 648 626 648 0.95

12 12 9.7e-06 0.00072 20.0 2.3 1 23 654 676 654 676 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.065	4.8	7.9	5.9	3	23	251	271	249	271	0.96
2	12	0.00029	0.021	15.3	0.5	1	23	277	302	277	302	0.94
3	12	0.0019	0.14	12.8	1.2	1	23	309	334	309	334	0.93
4	12	0.00092	0.068	13.7	4.0	1	23	344	366	344	366	0.97
5	12	0.0018	0.14	12.8	2.2	1	23	373	395	373	395	0.97
6	12	0.0071	0.52	10.9	0.5	1	23	401	423	401	423	0.97
7	12	0.052	3.8	8.2	2.6	1	23	429	452	429	452	0.97
8	12	0.019	1.4	9.6	4.1	1	23	458	480	458	480	0.95
9	12	0.009	0.67	10.6	2.3	2	23	487	508	486	508	0.96
10	12	0.00018	0.013	16.0	0.8	1	23	597	620	597	620	0.95
11	12	0.00036	0.027	15.0	0.8	1	23	626	648	626	648	0.95
12	12	9.7e-06	0.00072	20.0	2.3	1	23	654	676	654	676	0.98

Sequence Information

Coding Sequence: ATGAATGAGGGGAGTGAATACTCCATTCACTCAATATGCCGAGTTTGCTTAAATCACTTACGGAATGATGCCGCCTACGACCTGTTTCTTGTCCCGGGACTGGCCaaaaagttgtgtgtgtgcacttcACTTTCAGTGGAACAGCACGATGGCTTCCCGAAAAACCTTTGCACCAATTGCTACACCAAACTCAACGACTTGCACGGATTTCAAAAGCTTTGCGTGGACTCTGTTCAAAAGTTTCAAGAAATGGTTGCCAGTAATTATTTTATACCTGTTATTGCCGATATTAATCAAATTGACAATGTCGACATTCTGCACGTTGCACCGCACGATGGAGAAATGGAAGAGGACCGCATTAACTTCGATCCTCTCCTAAATACGAAAAttgagttaattgaaaatgaggaggaagtttttaaaatgcttgAAGATGTCGACAGAGAAACGGAGGAGgttgaaaaagaaaaggacTCGTCCAGTGACAGTGAAgctgacaatgatgatgatggtgactTTGAAGCGAATAGCAGTGAATCTGATGATGCAAAGCCCCTGTCCCGTCTACGAAGCACTTCcagaacaacaaaatcaaaggcTAAGAAGAATACAGCAGATGACGTTGACGATGATTCCTCAAGCTCCGAGTCGGATGACGATGATTATGATGACGAAGATGATAggcccaaaacaaaaccaaaacgcaAACGCATCCCGGCGGCTGAGAGACACTTGCATCGCCTCATCGATTGTCATATATGTCATCAGAAATTCAAAAAGGCAATTCGCTACGAGGAGCACATGAAGCATCACAACGATCTGTTGCCATTCCAGTGCACTGTGGAGACCTGTAAGAAGGGTTTTACTACTGCTGGTGGTCTGCGTCTTCATATGGACCACGCCCATTCGGAATTCTCTGAGGTTCATGCCTGCACATTCGAGGGGTGTGACAAGACCTTCCCTCGATCTGTCTTGCTCACGTTCCATATGAAAAAGGTGCACAAAATGGCTAAAGCTGATACCCGAAATCATCCCTGCACGGAATGCGAAAAAGTATTCCGTTGTCCAACGGCGcttaaaaaacatatgtataagCACACTGGCGAGGAACTGCCTTTTGCTTGCGAGATCTGTGGTAAACGATTCCACATCCACAGTGTGCTAAGAGATCATCTTTTGCGTCATGCTGGTGTTAAAAACCATGTGTGTCCCTACTGCGGAGTCGGTAAAACTACTCGACAAGAGTGgaacaaacacattttgacCCACACCAAGGAAAAACAGTTCCAGTGTCGTCAGTGCGATCATGCTTCCCACAACAAGCAGGCTTTGTCCAATCACGTCAAGGTAGTGCACATGAAGATTAAGAACTTTGCCTGTCAGTATTGCGGCAAGACCTTTGGTAAATCTCATGCCTGTAAGATCCACGAGAGGCTTCACACTGGCGAGAACTGTTGCGAGTGCAAGATCTGTGGAAAGATCTTTCTTTTTGAGAAGAGATTAACTAAGCACTTGCAAATCCATGAAAAGCGTGAACTAGTTCCGCCTGCTACCGCCGTTAAACCACAGGAAGAGGGAGCtgcacaaaacacacagaatGTGAGCCAGGAGGTGGCTGAACCAGTAGACGTAAAGCCTTTGCCAATTGTTCCCCCTAAGCCCAAACATTCTCATCGAGTTGAGCGTGTAGATATATCGCAGCTGGCGGGCACCTCTGTCAATCCAATATCTTCGGTATCGGTGCCATCGTGGTCGCCACAAGTGAACTTTACAAAGAAGGAAGGCCAGCACATTTGTCCAGGCTGTGGACGTGGCTTTAATCACATTGGCAACATGAAGCTTCACTATAAGATCATACACGAGAAGGTAAAGGACTTCGCCTGTCGCTATTGTCCCAAGCGCTTTGCCAAAGCGCAATACCTTCGTAACCATGAATATATCCATACTGGAGAGAAGCCGTTCGAATGCAAGATTTGCGGCAAGCATTTCCGTCAGGAGCAAGTGTTGAAGACGCATTTGAAGGTGCATGACAAGCCCCCGAGACCTCCTAAAGAGAAGAAACCACCAAAACCTTCTGTTAGCAAAGCAAAGGGATTGAAGGTTGAGCTTaacaaaaagcaaccaaaGATTTTTGATCAATATCAGGATCCCGCTGCGGAACGTGCCGCGGCTACAGCTGCACTGCAAGCACAACAGGAGGAGGAGGCTGAATTGAAGCGCGTGGCGGAAGAGGAGACTCGCAAGATTCAAGAGGCCGCGTGCGAACAGCTCAACAGACTTCAGAAGCAGGTGCAGAGCGAGAAGGGCAACTACGATACCTTCTATGGACAAAAAGTAGAGGCCGAGGGAACTAGCCTGGATGCTCTTAAATTAGATCATGTGTAA
Protein Sequence: MNEGSEYSIHSICRVCLNHLRNDAAYDLFLVPGLAKKLCVCTSLSVEQHDGFPKNLCTNCYTKLNDLHGFQKLCVDSVQKFQEMVASNYFIPVIADINQIDNVDILHVAPHDGEMEEDRINFDPLLNTKIELIENEEEVFKMLEDVDRETEEVEKEKDSSSDSEADNDDDGDFEANSSESDDAKPLSRLRSTSRTTKSKAKKNTADDVDDDSSSSESDDDDYDDEDDRPKTKPKRKRIPAAERHLHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTVETCKKGFTTAGGLRLHMDHAHSEFSEVHACTFEGCDKTFPRSVLLTFHMKKVHKMAKADTRNHPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFHIHSVLRDHLLRHAGVKNHVCPYCGVGKTTRQEWNKHILTHTKEKQFQCRQCDHASHNKQALSNHVKVVHMKIKNFACQYCGKTFGKSHACKIHERLHTGENCCECKICGKIFLFEKRLTKHLQIHEKRELVPPATAVKPQEEGAAQNTQNVSQEVAEPVDVKPLPIVPPKPKHSHRVERVDISQLAGTSVNPISSVSVPSWSPQVNFTKKEGQHICPGCGRGFNHIGNMKLHYKIIHEKVKDFACRYCPKRFAKAQYLRNHEYIHTGEKPFECKICGKHFRQEQVLKTHLKVHDKPPRPPKEKKPPKPSVSKAKGLKVELNKKQPKIFDQYQDPAAERAAATAALQAQQEEEAELKRVAEEETRKIQEAACEQLNRLQKQVQSEKGNYDTFYGQKVEAEGTSLDALKLDHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00610124;
90% Identity: iTF_00508555;
80% Identity: -