Scyr013825.1
Basic Information
- Insect
- Scaptomyza cyrtandrae
- Gene Symbol
- kn
- Assembly
- GCA_035044605.1
- Location
- JAWNNS010000646.1:14283089-14304812[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-89 5e-86 289.3 0.0 39 182 55 198 37 198 0.98
Sequence Information
- Coding Sequence
- ATGGAATGGGGCAGAAAGCTATATCCCACCGCTGGACCCCGATCCGCCGGTGGCCTAATGTTCAGTTTGCCGCCAACAGCGGCCGACTTGAATCAACCCCGGGGTCCAATGACATCACTCAAAGAGGAACCCCTGGGTGGGCGTTGGGCCATGCAACCAGTTGTGGATCAAACCAATTTGGGCATTGGACGCGCCCATTTTGAGAAACAGCCGCCAAGCAATTTGCGCAAGTCgaatttctttcattttgtgATTGCGCTCTACGATCGTGCCGGCCAGCCGATCGAGATCGAGAGAACCGCTTTTATTGGTTTCATCGAAAAGGATTCCGAATCGGATGCGACAAAAACTAATAATGGCATTCAATATCGATTGCAATTGCTTTATGCGAACGgcGCCCGACAGGAACAGGATATATTTGTCAGACTCATCGATTCGGTGACCAAAGCGGCCATCATCTATGAGGGCCAGGACAAGAATCCCGAGATGTGCCGCGTCCTTTTGACGCACGAAGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTAA
- Protein Sequence
- MEWGRKLYPTAGPRSAGGLMFSLPPTAADLNQPRGPMTSLKEEPLGGRWAMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00473569;
- 90% Identity
- iTF_00608227;
- 80% Identity
- -