Scyr013826.2
Basic Information
- Insect
- Scaptomyza cyrtandrae
- Gene Symbol
- kn
- Assembly
- GCA_035044605.1
- Location
- JAWNNS010000646.1:14321437-14324584[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-119 1.1e-115 387.3 0.0 205 384 1 209 1 214 0.99 2 2 3.3e-06 0.0088 14.5 18.7 424 535 216 326 209 356 0.56
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGgtcgtCATATCCACACAAGTGGCTGTTGATGGACCACTTTTAGCCATCTCGGATAATATGTTTGTGCATAATAATTCAAAGCATGGCAGACGAGCCAAACGATTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTTTACCCACCGCTACCTGTGGCGACACCCTGTATCAAAGCGATATCACCGAGCGAGGGTTGGACAACAGGTGGCGCCACTGTGATCATAGTTGGGGATAACTTCTTCGATGGCTTACAAGTGGTTTTCGGCACAATGCTAGTGTGGAGTGAGCTAATAACATCGCATGCGATAAGGGTACAAACACCGCCCCGACATATACCGGGTGTCGTTGAGGTAACGCTATCCTACAAGAGCAAACAATTCTGCAAAGGATCGCCCGGAAGATTTGTCTATGTTTCAGCACTCAATGAACCCACAATCGACTATGGATTCCAGCGGCTGCAGAAGCTAATACCACGACATCCCGGCGATCCGGAGAAACTGCAAAAGGAGATTATACTGAAACGTGCTGCAGATCTGGTCGAGGCACTCTACTCCATGCCCAGCAGATCACCCGGTGGCTCGACCAGCTTCAACTCCTACGCGGGTCAACTGGCTGTGAGTGTACAGGATGGCTCGGGGCAGTGGACAGAGGATGATTATCAGCGTGCCCAGTCGAGCAGTGTTAGTCCACGTGGTGGTTATTGCAGCAGCGCCTCAACGCCCCACAGTTCGGGCGGTTCGTATGGGGCAACGGCAACTAGCGCCAGCGTTGCAGCCAGTTCTAATGGTTATGCGCCTGCACCGAATATGGGCACACTCTCCTCATCCCCGGGTAGCGTCTTCAACTCCACATCAATGTCCGTGTCGACGCCTTGGCATTCGGCTCTTGTGCAGCATCATCATGTATCCGCCGTCGCCGCCTCCGCCGCTACCagcaatcatcatcatcattcgcATCATCATTATCCGCATCCGCATCAGCCTTGGCACAATCCGGCcgtaacagcagcaacagcggcggCAGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATSASVAASSNGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHVSAVAASAATSNHHHHSHHHYPHPHQPWHNPAVTAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00521135;
- 90% Identity
- iTF_01549315;
- 80% Identity
- -