Scyr008048.1
Basic Information
- Insect
- Scaptomyza cyrtandrae
- Gene Symbol
- gt
- Assembly
- GCA_035044605.1
- Location
- JAWNNS010000639.1:13931381-13932871[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5 2.5e+03 -1.4 2.3 28 52 37 61 32 72 0.63 2 3 6.8 6.8e+03 -2.8 1.1 33 47 76 90 69 104 0.55 3 3 2e-12 2e-09 37.4 5.6 5 61 407 463 403 465 0.93
Sequence Information
- Coding Sequence
- atgttaATGCACGAGAAACTCATCAGCGGGCAGTTCTTTGATTTGAAGACCGATCGCAAGCCATTGCTGCATCAtctccatcatcatcatcaccatccccatcagcagcagcagccgcagcagcagcaatatcagTTGcctcagcagcaacatcatttacaccagcaacaacaacacttatCTTTGCCCAAAATGGATTTGTATGCCGCCTATGCCtatcagcaacagttgctatCGCtaagccagcagcagcagcagcagcaacaacagcagcagcaatccgttgctgttgccgctgagGTTCTGGACTTGTCACGTCGTTGCGACAGCGTTGAAACGCCACGAAAGACGCCATCGCCATATCAGACAAATTATAGTTATGGCAGCGGCTCACCAGCCGCctcaccaacagcaacaataccCACCAATCTGCTCTATTctgcgcaagcagcagcagctgcccagcaacaacaacaacaacaacagcagcaacagcaactggcaACTCTCTATCCTGCGCTATATTATGGTGCCAACATCAAGCAGGAGCATACagtgccaacagcagcagcagcaatcaagtctaacaacaacagcaacaacaatagcagcagcaacaccaataATACTGCTAGTTTGCTGCAATCGTTTGCCGCTGCATcggcagcagctgttgctgccgcagcAATCTCATCACGACCCGCCAGCAATGCCAGCACCATGCAAATCGATGTCCTAGAAGCCCCACAatcgccaccaccaccaacagcagaaGCCAGCAACAATTGCCACAGCTCAACACCGACAAGCAGCACAGGGTTCTCCGCATCGGATGCCATCAAACAAACGCGTCCATTCAAAGCCTTCCCGCGGGATCCGCTCGTAATTGCAGCTAATTTCGCTGCCACCGATGTCCTGCTCGATAATCCGCGTGTTGAACGCTATACAGAGTATCGCAAGCGAGTTCTTGAGCAAATTCGCAGCTCAAATGGTGGCTCACGCACTGTTACAAATCCCAAAATGCGACGCACTAACTCGAGAAGCGGCAGCGTTAACGAGGGCAGCTCCTCGACAAACAATAGCGAGAGCGAGGATCGCGCCGATCGTGCTGAGGAGTCCAGCGATTGTGATTCACACTACACGGACAACAAGCTGACGGGAACAGCAGCTGGAGTTGGAGGCGGCGCTAATGGTGTTGGGCAAGTCAAGGATGCCGCCTACTATGAGCGGCGGCGTAAGAATAATGCTGCGGCCAAAAAATCGCGCGATCGTCGTCGCATCAAGGAGGATGAGATCGCTATAAGGGCGGCGTATCTGGAGCGTCAGAATATTGAGTTGTTGTGCCAGATTGATGCGCTCAAGGCGCAGCTGGCTGCCTTTACGGCCAAAGTAGCTGTTTAG
- Protein Sequence
- MLMHEKLISGQFFDLKTDRKPLLHHLHHHHHHPHQQQQPQQQQYQLPQQQHHLHQQQQHLSLPKMDLYAAYAYQQQLLSLSQQQQQQQQQQQQSVAVAAEVLDLSRRCDSVETPRKTPSPYQTNYSYGSGSPAASPTATIPTNLLYSAQAAAAAQQQQQQQQQQQQLATLYPALYYGANIKQEHTVPTAAAAIKSNNNSNNNSSSNTNNTASLLQSFAAASAAAVAAAAISSRPASNASTMQIDVLEAPQSPPPPTAEASNNCHSSTPTSSTGFSASDAIKQTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSSTNNSESEDRADRAEESSDCDSHYTDNKLTGTAAGVGGGANGVGQVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKAQLAAFTAKVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00494864;
- 90% Identity
- iTF_01327644;
- 80% Identity
- -