Scal000919.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza caliginosa
Gene Symbol
nfxl1
Assembly
GCA_035044725.1
Location
JAWNNR010000047.1:605080-608141[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 2 1.6e+04 -8.1 6.4 15 19 148 152 147 152 0.82
2 22 0.13 1.1e+03 -0.3 0.4 4 10 183 189 182 189 0.95
3 22 6.5e-08 0.00053 19.8 15.5 1 18 197 213 197 214 0.98
4 22 1 8.5e+03 -3.2 2.7 6 10 240 244 239 244 0.89
5 22 9.7e-08 0.00079 19.3 17.0 1 19 250 269 250 269 0.98
6 22 0.71 5.8e+03 -2.7 1.2 5 10 293 298 293 298 0.93
7 22 1.8e-07 0.0015 18.4 14.2 1 19 304 323 304 323 0.96
8 22 0.89 7.3e+03 -3.0 0.5 1 7 347 352 346 354 0.49
9 22 8.4e-08 0.00069 19.5 12.2 1 18 357 374 357 375 0.96
10 22 0.7 5.7e+03 -2.7 0.4 1 5 384 388 384 393 0.73
11 22 2 1.6e+04 -5.0 2.3 5 10 398 403 398 403 0.91
12 22 0.022 1.8e+02 2.2 15.9 1 18 409 426 409 427 0.94
13 22 3.3e-08 0.00027 20.7 14.7 1 19 436 454 430 454 0.90
14 22 0.37 3e+03 -1.8 1.1 6 10 482 486 481 486 0.92
15 22 2 1.6e+04 -5.1 1.3 9 11 491 493 490 494 0.77
16 22 5.4e-05 0.44 10.5 7.2 9 18 499 508 497 509 0.90
17 22 0.027 2.2e+02 1.8 5.7 1 11 521 530 521 531 0.95
18 22 1e-05 0.085 12.8 3.1 1 11 596 606 596 607 0.96
19 22 0.06 4.9e+02 0.8 16.2 3 19 636 652 635 652 0.92
20 22 1.6 1.4e+04 -3.8 1.4 8 13 657 662 656 662 0.73
21 22 1.5e-06 0.012 15.5 12.0 1 16 703 717 703 723 0.90
22 22 0.61 5e+03 -2.5 0.5 11 16 753 758 753 759 0.80

Sequence Information

Coding Sequence
ATGGAAAAGTTCAATAAAGCGCAGGCAAAGAATTTGGCAGCTGCAAAGAAACTTGTGGATGCCTATGCATCAAGCTCGGAAGATGAGGGCGAACTTGACGAAAAACATATACTAGATCTCCTATACAAGCATTATAAATCCTTGCCGGATAACTCGCATaccacaaacaatgcaaatcgTACAGCAACTTTCTTGGAAAACACTCTTCATTCGGGTGCGGCAACCTGTCTAATTTGTATTGGCAGCATTCGACGTGTTGAGGGCATTTGGTCATGCAAGTCATGCTACTGTTTCTTCCATCTCAAGTGCATCCAGCGCTGGGCCAATGACAGTGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAAAATAGCAGCCAGGGACACTATAATCATTTGGGCGAATTTGTGCCACCAAAGCGCCCAAAATCGTTGCACTGGTGCTGTCCGCAGTGCCGCACAGACTATCAGCCCTCTGATCGGCCCACACAATATGAGTGTTTCTGCGGCAAGGAGGTGAATCCACAGGCTCAACCTTTTCTGGTGCCTCATTCCTGCGGCGAGATCTGCGGCAAACTTCTGCAGCCTAAATGTGGCCACGATTGCAAGCTACTTTGTCATCCGGGTCCGTGTCCTCCATGCGCTCAACTGGCGCATAGTTCCTGTCTGTGTGGCAAATCCCCGCCACGCTCAGTACGCTGTATCGACAAAAATTGGCAGTGCCAGCAAACGTGTCAATCTTTACTGTCCTGTGGCAAGCATAAATGCAACCAAAGATGCCATCGTCCTGGCCAGTGTCCGCcgtgcagcagcaagagctcCCAGTTCTGCGAATGCAAACGTGAGCAAAAAGTTGTAAACTGTGCGGACCCAAAATGGAAgtgtaaaaatGTTTGTGGTGCTCTATTTGATTGTGGCCTGCATAGCTGCGATAAGGTGTGCCATGCTGGTCCCTGTGGCGGCGAATGTCCTTTGGGTGTTCGCAGTTGCCCGTGCGGCAAGAGCATCAAAACTGGCAGATGCAGCGAAGTACTGGAAACCTGTGGCGACACCTGCCAGAAGCTCTTGTCGTGTGGCCAGCATAGCTGTGCGCAACGCTGCCATCGCGGTCCCTGCAATCTGTGCCTGGTGCGCACCAAGAAGAAGTGCCGTTGTGGGCTGCATGAAAAGGAGCTACCCTGCTCCAAGGATTTTACCTGCGAAACCAAATGCAAGCTGATGCGTGACTGCAACAAACATGCCTGCAATCGCAAGTGCTGTGGCGATCAATGTCCGCCTTGCGAGAAGATCTGCGGCAAGCAGTTGAGCTGCAACAAGCACAAGTGTCAGAGTGTGTGCCACAATGGACCCTGTTATCCGTGCAAGTTAGAGTCGCAAGTCAACTGTCGTTGTGGCAAGACGCGACGCAGCGTTCCTTGTGGCAGGGAGAAGAGTGCACGCATTGCCTGTCAGGAGCTCTGTCGTATCTCGGCCACGTGTCATCATGCTATCAAGCATCGCTGCCACAAAGGTGAATGCCCGCCATGTGCACAACCATGTGGGTTACCCAATGACACTAGCGGCTGTGGACACATCTGCAAGGTGCGCTGCCATGCAGCTATACGTGTGCCTAAGACAGCAGATGCACTGCGTCCGCATGCCAATAAATATGAATATCGTGCACAGCCGCATCCGCGTTGCGAGGAGGGTGTTAGCGTCACCTGTATAGGTGGTCATGAGGTCGCCACCTGGCCGTGCTGGAACTCCAAACCATCGTCCTGCGCACGCAAATGTGGACGGCAGTTAAAGTGTGGCAATCACAAGTGTGCGTTGTTCTGTCACGCAGTGCCCAATCTCATGGatatgcaacagcaagtaGGCTGCGCTAATTGCGAGCAGGGATGCGCTATTGCTCGACCTGCAGGCTGCACACATGCCTGTGCCAAAGGCTGTCATCCACCTCCTTGTACACCATGCAGTTTTGTGATCAAAAACAAGTGTCATTGTGGCCTCAATCAGGTCATTTACAAGTGCAGCGAGTTCTTTAACCAAGAGGGATCAGGGCAGGTTATCCTGGAGCGCCAACAAAAGCTGTGCAGCTGTGGTAATCGTTGTTTAAAGAATTTTGCTTGCGGACATCGCTGCCTGACCATCTGTCATCCCGGTCCATGTCCTAATCCCGAGATGTGTCGCAAAAAAGTGCgaatttattgtgtttgcaaGCGCCTCAAGTTGGAGATAGCCTGCGACAAGCATCGAGCAGGTCAAACGTCGTTGGAATGCGATGGCAACTGCCAAGCTGAACGCGTCAAAGCTGAAGCCacggaacagcaacaattggagCGCCGTTTGCGACAGGAGGAAGAAAAGAATCGTCTGGAGCTAGAGAAGTTTGAGCAAAAGTTTGGCAAGCGTAAGCCCAAGGAACGCAAAGTGATTGATGTGCAAACGACTAAATCCCAAATCGACTGGAAACGTTGGGCCATCTATGCTGTGGCGCTACTTGCGGCACTGGGCGCTCTAGCCGTGGCTTACTACGCAGAGAGCTAG
Protein Sequence
MEKFNKAQAKNLAAAKKLVDAYASSSEDEGELDEKHILDLLYKHYKSLPDNSHTTNNANRTATFLENTLHSGAATCLICIGSIRRVEGIWSCKSCYCFFHLKCIQRWANDSVMQMKVKAEQQNSSQGHYNHLGEFVPPKRPKSLHWCCPQCRTDYQPSDRPTQYECFCGKEVNPQAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSPPRSVRCIDKNWQCQQTCQSLLSCGKHKCNQRCHRPGQCPPCSSKSSQFCECKREQKVVNCADPKWKCKNVCGALFDCGLHSCDKVCHAGPCGGECPLGVRSCPCGKSIKTGRCSEVLETCGDTCQKLLSCGQHSCAQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKDFTCETKCKLMRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIACQELCRISATCHHAIKHRCHKGECPPCAQPCGLPNDTSGCGHICKVRCHAAIRVPKTADALRPHANKYEYRAQPHPRCEEGVSVTCIGGHEVATWPCWNSKPSSCARKCGRQLKCGNHKCALFCHAVPNLMDMQQQVGCANCEQGCAIARPAGCTHACAKGCHPPPCTPCSFVIKNKCHCGLNQVIYKCSEFFNQEGSGQVILERQQKLCSCGNRCLKNFACGHRCLTICHPGPCPNPEMCRKKVRIYCVCKRLKLEIACDKHRAGQTSLECDGNCQAERVKAEATEQQQLERRLRQEEEKNRLELEKFEQKFGKRKPKERKVIDVQTTKSQIDWKRWAIYAVALLAALGALAVAYYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01324578;
90% Identity
iTF_01323792;
80% Identity
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