Scal006648.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- elt-1_1
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000316.1:195545-198023[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.65 8.9e+02 -0.5 3.6 1 29 476 499 476 505 0.76 2 2 2.2e-17 3e-14 52.2 7.1 1 35 527 560 527 561 0.97
Sequence Information
- Coding Sequence
- ATGGAAGCGCAGACGacgccgcaacagcaacagcaacagcaacaattgcaacagcaacagcaacaacaacagcagcagcaacaagtgctgagcaaacaacagctgcaattgctggataaaatcaaaattgagTCTAGTAACGGCAGCGATCAGCAAGCCAATACGGTCctggagcaggagcaacaggagcagcaacagcaacaagcgataacaacaacaactgtcggTGTACTGGTGCAATCGAATAGCCAAACAAGTGAATCCGAtgaacaacaccagcagcagacACAATTTGTTGTAGTTCCACGCACCCAACAACGACGCATCCTGACCACAGCGGGCACACTCGAACTGAATGAGACGCGTGAAGGCGATCACAGCACCAATAATAGCAGCAGTGGAAGCTCGAATTCAGCACCAGAGACTCATATTGAGTATCAGCGTAGCTCGCACCACTCACCCCACTACATACAAATGGCACCACGCACCGCTGCCGAGGTGGCCGAGCAAGTGGCCAATGCCCATCCGGGCACACTGTATGCCTATCCATCGGGTCAAATCATATGCAGCAGTGATGATGTGGCGCCAATTAAAATCGAGACAATTGACAAGAGCGAAGGGTCGGCTGAATCGCAATTGCAACAATCACAGCAACTgacacatcagcaacagcaacagcagcagcaacagcaatgtcCCACGCCCAATGGTGGGGCAAACTATGGTGAAACTATAGTGGTTAGCAGCGAGGCTGCACTGCAacatcatcaccagcagcagcaacaacaacagcagcaacaacagcaacagcaccagcagcagcaccaacatcagcagcaacatcaacagcaacaacaacaacaggcagcagcagctgccgctgcagcagttgcagctgcacaaaCGCATAGTGTGCGTTATGTTGAGGAGACGCCCAGCGGCAATATGTACTATGAAACGTCCGTTGTGGATGCCAGTGTTCATCCCAATGAGTCCAAGACCTATGCAGATTTGGGCAATGCCTACGCGCCCTTTCCGCCCAACTCGACGTTCAGCAGCAATGGTTatgcggcggcaacaacattgCAGGGCAACACCATCTACAGTGTGCCGGGAACAGCACAATTCATAACCAAATCCGATCCGAACTTGAATCCATTGAGACAAGCTGCAACAGGTCCATATCAAACGATATCGTTTCTGGACGGCACAGCCACTGCTGATCCGGGCCTGTGGACAACGGCTGGTGGAGATTATCAGAATGTATCTTTTACAAACTATCAAACACAGGTCATTGACGACTATTCCACTGGCAATATAACGGCAGCCCATTGGCCACCCGCTGGCAGCATTGGCAACTATGATCCCGGACTGGCAGCAGCCAGTGCCACACCACCAGCCACCCATGGCCTGCAGGAGCTCAAGTGCGAGAACTGTCAGACAGCATTCATACGCAAGGGCAGCGAGTGGCCCAACTGTCCCAATTGCTACTTGCGCCCCCAGGCTGGTCGACATGTGCCACAGCGGCAGAAGCCAAAGGCTGCAGCGGCACCCAACAATCGACGCAATGGCGTCACCTGTGCCAACTGTCAGACCAACTCGACAACGCTTTGGCGTCGCAACAACGAGGGCAATCCTGTCTGCAATGCCTGTGGTCTCTATTACAAGCTGCATTCTCTAAATCGACCGCTCTCCATGAAGAAGGAGGGCATTCAGAAACGCAAGCGCAAACCAAAGAACAATGGAGGACCGCTGCCACATCGAGCGCTGCCAAGCATGCAACAGGGTGTGAATTTGATGGTAAACAGCGGCATGGTGTATCCATCTCAGGTGGCAGTGGGTTTGCCCAATAGCCAACATAATGCTAGTCCCGAGTTGCATGACATGTCCACAACTGGACCTGCTGCTGGACAGCGTGTGGTGGCCATTCCTCTCAATCCCACTGTACCCACCTCCGATGGCACACTCAACATGTCGCGCCATCATATGACAAGTGACAGTCACTCACCCTatagccagcagcaacagcaacagcagcaacagcaacagcagcagcagcagcaacaacctcCGTCACAGAGTCAATCGCCGCATTTGCCGAATTCCGTAACACTTAACCGTCAGATAGCACAGTCTGTTCCACCAATCGAAAGTGGACGCAGCTCCAACAGCGAACTGACTCCAAGCGTTATAACACGCACAGGTTTGCCGGAACGTTCTTCGAATAACTAA
- Protein Sequence
- MEAQTTPQQQQQQQQLQQQQQQQQQQQQVLSKQQLQLLDKIKIESSNGSDQQANTVLEQEQQEQQQQQAITTTTVGVLVQSNSQTSESDEQHQQQTQFVVVPRTQQRRILTTAGTLELNETREGDHSTNNSSSGSSNSAPETHIEYQRSSHHSPHYIQMAPRTAAEVAEQVANAHPGTLYAYPSGQIICSSDDVAPIKIETIDKSEGSAESQLQQSQQLTHQQQQQQQQQQCPTPNGGANYGETIVVSSEAALQHHHQQQQQQQQQQQQQHQQQHQHQQQHQQQQQQQAAAAAAAAVAAAQTHSVRYVEETPSGNMYYETSVVDASVHPNESKTYADLGNAYAPFPPNSTFSSNGYAAATTLQGNTIYSVPGTAQFITKSDPNLNPLRQAATGPYQTISFLDGTATADPGLWTTAGGDYQNVSFTNYQTQVIDDYSTGNITAAHWPPAGSIGNYDPGLAAASATPPATHGLQELKCENCQTAFIRKGSEWPNCPNCYLRPQAGRHVPQRQKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHSLNRPLSMKKEGIQKRKRKPKNNGGPLPHRALPSMQQGVNLMVNSGMVYPSQVAVGLPNSQHNASPELHDMSTTGPAAGQRVVAIPLNPTVPTSDGTLNMSRHHMTSDSHSPYSQQQQQQQQQQQQQQQQQPPSQSQSPHLPNSVTLNRQIAQSVPPIESGRSSNSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01326054;
- 90% Identity
- -
- 80% Identity
- -