Scal011696.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- HIVEP2
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000843.1:123342-131296[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.0009 0.059 13.7 0.4 1 23 194 216 194 216 0.98 2 8 0.00025 0.016 15.5 2.9 1 21 222 242 222 246 0.89 3 8 0.0093 0.61 10.6 0.2 1 19 886 904 886 907 0.93 4 8 2.6e-06 0.00017 21.7 2.0 1 23 1632 1654 1632 1654 0.99 5 8 1.1e-05 0.00071 19.8 5.3 1 23 1660 1684 1660 1684 0.92 6 8 0.0011 0.068 13.5 2.7 3 23 2140 2160 2139 2160 0.92 7 8 0.00075 0.049 14.0 1.2 1 23 2166 2190 2166 2190 0.91 8 8 0.0024 0.16 12.4 2.7 1 23 2211 2235 2211 2235 0.92
Sequence Information
- Coding Sequence
- ATGACAACAGAGCAGAATGCATCAATTGCTGATGGATGGACAAACTCAAACAATTTGcgttatttgcacaaaaagttTAAGCGCTTGGCCAGCACCACCGAGTCAGACAAGTGCAATGGTGCGGCGGTACGCACCACATCGCTTTCATCAAATAGCTCGTTGTCGCCGCCACTACCACCTCGGATGTCAACAGTGGTGATGCCACTAACGACTCCTATGCCTAATGGGCACATGCCATTAAAGGTAGCTCCCTTTTCGCCGGCAAACAGTGAGTTTGGTGTCAATCTGGaatatgccaacaacaataacaactgtcAGGAggagagcaacagcaataaaatgatGATAGCTGCTGGTGCACCTAGAACACGCACGCCActaagcaatagcaacagccaCATTAACTTTGTTAGCAATGCAACAGTGTCGCCAGCAACATTTgctcagcatcagcaacagacACAGCCAACGGCActaacatcagcaacaacaatatcatcaacaacaactacaacaacagtatcaacgacaacaatatcacaaacaccagcagcagcacaaggcGAGAAAAGTAGTCGCTTTGTGTGTCCCTTTTGTAACATGATCTGTGCAAAGCCATCAGTGCTTCAGAAGCACATACGTGCCCATACCAACGAGCGCCCGTATCCATGCGACAACTGCGGCATCGCCtttaaaacgaaaagcaatCTCTATAAGCATTGTCGATCGCGTTCCCACGTGGCACGCGTACGTGGCTTAGAAGTCCCAACCAACGAGACTGATGGTCTCTCCGATCAGGATGGCGATGGTGAactaagcaacagcagctccgAGTTGCTAAGCGTTGAAATTTTGAGTCGAACTAATTCGCCATATGATGACGCCATACCATCGCCAACGCCATCACCGTCGACTTTGTCGGCTGCAAAGAGCGCTTATCTGCAACAGccacaattgcagcagcatatgcaacagttgccgctTGGCTCACCCGCTGCCGGAACTTTGCCGCCCGCCCCGCCAACAGACCCATTACACTCTGCCACTGCTCAACATCGCCTGTCGCTCGACTACAAGCCATACAAGCCCAAGTTTCACAATGCTGCTCTCTATGTGCCCGGCAGCATAAGTAAggatcagcaacagcagcatacactgcaccagcaacagaagcagcaaattgagcaacaacaaatgttgcaaacacagcagcagcaaattaaactgtcaacccagcagcagcagcagcaacaacagccatcGCTAACCCATCCCACGCTTTCGCCCAGCACACAGATGAAGCTTAACAACCACATAAACTCACATCAGATGCAACTGCAGCttcaacaccaacagcagcagcagttgcacgCACAGCaatctttgttgttggcggctACTGCTAATCCTGTAGCGTTGTCAGCTCTTCCCCCGCCGCCGCCTATTCCTGCGGGCGTCTTTTATTTGGGTCAACCGCCGTATTATAATCCTACTGCAGCTGCAATGCATCAACATGCGATCGCCATtcaacagttgcagtttcagcaacattttcaacttcagcagcagcagcatcaccaacatcaacaacagcagcatcagcaacacctccaagaaaaacagcagcaacactcaCCGATCCTGAAGccaccaccacaacagcaacaagtgccacagcagcagcaaccgttGCACCTGCCGccacaacaaccgcaacagCTGTTGGTGCGGTCAAATAGCCAACAATCAGCAGTAATTACAACCACAGCTGGATTGCCAGcacctgccacgcccaccccGCCTACAAATTTAAGCAGCTTTACATGCTCCAGCGGCGGCATGCAACTTAATGTTGAAAAGGTGCAAGAACACATATCTAATCTTATCTCACAGAATGAGGCTATAGTGGAGAACAAAGAACTTTTGCTACAGAAGAAATATCCCAAGCAACTAAACCGTTCACGAAGCTTTAACTGTGCAACTaatagtagcagcaacagcaacagcaacagcaacagcaacataagcaacagcaacacaacggCAGCATACACCAACaatcacaataacaataatagcagCAGTCAACAGCTGGTTGGGGCAAAAGTTAACCTTGCACATGCTATAgtacagaaacaacagcagcagcatatgcAACATCAGttgcaccaacaacagcagcaacagcaccaattGTAtctgcatcagcagcaattaGAGCCTGTTAATGGTCTTATAAAgcgtagcagcagcactgcaACCTGTGATAATGTGAACGTCAAGGTTCCAAGCATACCAACATTAACGCCAAATATGAAATTTCAGCAGTTGCCGCCACCGCCATCGCCAATACCACAGCctctgcaacagctgcagtaTCGCCAGGATCCGACAACGCCCGTGCCTAAGttggagcaacagcagtcgtTGGCACCCAATCACGCCCAGCCACTGAATTTATCTGCGAAATTCAAGCCAGTAATTACAATgccaataaaagcaacaggcACGTTAGCCCCgacagcatcatcagcaagTCTTAGTAAGATTACAACAATAGCGTTAGCGGCGCCAccaaataattcaattattaaaaatttactgCTTAATGCACGGGGCTTAGCTGTTCCAATTGGAGAAGGCGATGATGCCGTCTATTCCTGTCCCATTTGTGCCAACGAGTTTCGCAGCGCGGACGAGTTGAAGCACCACAATAGTACCTACTGCCAGGATGCAAACAGCAGTACACCAATCAGTCCTGCATCATCGCCTAGCACAAAATTTTTTCGCTCCAATTCCATAACGTTTAGTCTGCCTGAGCTCAAGTCGCACATGGCCAACTCTAAGAACCCGCTATCATTAGCTAAGCTCGCTTGGTCACAGCTTAAAACAAAGCCAAGCAGTTTGGTATTGAGTCGGCTCAGTGCAGCTCAATCTCCCGCCCGCACCTCAACGGTAACAGCAGCtattaacagcagcagtagtagcaccagttgcagcaacaccaacactaataacaacaacagctttacAATAAACAAGATCACCAACataccagcaacagcagttgcaatcCCGCCAAGCATTGATTCGTCAAACGTTGCTTTGCGCTTTGTAGACGCACCGCTGCCATCGCCCGGTCCATTGCTCGGTAAGACGCCGTTGGTAGACTATGCAGCGCCGCGAAAGGCGCCTGATGCGCAGGTGATCATAACAAAAATGCATGAGGATCGCTTAGAGAACATGATTGTTGAGACGCCGTCAAAGCGAGCAAAAATTAGTGACGAGAATCCAGCTACAGCATTTACATTGTCAGCGGTCGTTGCTGATATGCTATTTGGTGGCAATCAGGAGTTGCAATTTGGCGCCAAGGAGGAGCGTTTGCGTCGCTTCACCTCTTCGGGCGGTACCATGATACCCATTTCCGAGTGCCCCGAGCTAGACAAGAGTCCAAAAATGATACGCACTCCGTTGCTATCAGGTGGTAGCTTCCAGGAGATGTCGCCACGCCTAACCGACGCAAAAGAACGTAAACTGCCAACCAATAGTAATAATGGATTACTGGTCATTAATACCTCATCAACGCATCAGCACTTTCAATTTCCACCAATCAATTCAATAACTGCTTTTAATCCGCTCACGCTTCCGCCAATGAGCAAGAATAACAGGAGCAACTCCAACAATAGCGGAAGCAACGTTCGGATTGGAGATGCTAACAAAACGATACCCTATGTTCCGGGAATACCAGGACCAGGAAGCTTATCCTTGCTACCGCCACCACAACAGCATCAGCGTGGAAGCAGCCCTAATCGAAAACAGCCCAGTCccaatcacaatcacaattcACTGCTAGCTGGTGTTGAGAATCCGTTAAAGGCACTCTCGCCCTTTGGTGGTGTTCAGAATCTGCCAAGCGAGTTTAGTCGCCAACCACCGACCCCAACTCAGCGCCATGCTCTGCAATGGAACAACAGAAATACTACGAATAAAACGCTAGCATTGATAACTGGTGACAACACGTTGAGCAAAAAGCTGCCTTTAAAAAatttggagcagcagcaatcccAGGTACAGCTGCAGACACCAACTCCAGTTTTACAGGAAGTGCGTCACTTTAATTTCGAAAGTGTGAACAATGTAACGCAGGAGGCGCTGGCGCCGCTGCACGTGGACACACCAAATGAGGCCgttataaaaacaacaaaactggcaacaacaatagccgtTACCACAACAAGTGCCAAGTCAAAGTTTCTTCGACCCACCAGCCTGCCACTCAAGCCGGGCACATTTACACCGAAGCGACATCATGGAATCACGCCCACAGCAAATACACTGCCACTTATCTCACCTGAAACTCCGCGGCCTTCCAAATCATGCGTGCAACTATATTTGAATGGACATGCATACACGTATCTGGGGCTTAAGTGcagcacaaaaatgttttattgtaCGGTAAACTGTCCACAACCCTCGTATGTCGCTGGAATGCACAAGCTGTCGATGTacagtgtgtggcaagtgtgcGAAGAGAACCAGCCGCATCCGTTGGGTCTCAAGCCCAAACAGGTGATTGGCCTGTATGATTCCCGGCAGAAAATGCTTGGCGCGGGTAGCTTCACAGCTATGGCGGGTAAGGACAAATTGCACTACTCACTGGTCAGTTCGCAGCAAATTGTCAGCACATCCTCAATGACGTCAAACGGAGTGAACAAgaaccaccagcaccagctaAAGCCTCTACCATCTATTGGCGCTCTGAGCGAGGCTAATATTGCAGCCAAGGCTAGTGAGGAGGCGGCTGCTAAGAAAATGGAGTCGGGACAACTTTTAGTCGGTGGCTATGAGTCTCATGAagattatacatacatacgtggaCGTGGCAGAGGTCGCTATGTTTGCTCTGAGTGTGGCATTCGTTGTAAGAAACCGTCAATGCTCAAAAAGCACATACGCACCCACACGGATGTGCGTCCATTTACCTGCAGCCATTGCAACTTCAGcttcAAAACCAAGGGTAATCTCACCAAACACATGCAgtcaaaaacacatttcaaaaaATGCATCGAGCTCGGCATTAATCCGGGCCCAATGCCTGCTGACGGTGATTTTCTTGATGTCGATGTAGACTTTGATCAGCAATCATCCACATCGGCTGGCGGACGAACCTCCTCGATGGCTGGTGAATCTGATTCGGAAGACTACAGCGACAACGAGTCTGAGAGCAGTGACACTGATGAATCGAAGTCTCGTATTAAGGAGCACGAGGCAGCTCGTGGGTTGCTATCGCTGTCAATGACGCCACCAATACCGCTAAGCACTTCACCTTATCCAGCTTCGGTCCAAGACACACCTATGCCGGCTGGCAGTCCGGCCAACAGCGTTGGCTCTTCGGCAGGCAGCACAGCTGGTGGATCTCAGCCCAAGCGTCAGGTGTGTTCTTTTACTTCCCCAAAGCCACCATTTGATTACCAGAAGCAGGAACAGTATTACTCCAATCCTGAGGAGTCAAAGCCCAAGCGAGGCGTGCCTAATGACGAGGGAAGCGCTCCGATGGATTTAACTAAGCCACGCACAATGCCAAGCATTTTAGAAGGCTTGGAGCTGTTGCACAAATCGAATGCGGAGCAGATGCGCGATGTCATTTTTGGAGTGGGCAACAACGAGAGCGGTTTTATGAAGACGCTTATATCGGTGTCGGATAAGGTGCGTATCTCTGCCGAAATGGATGAACAGGTCAAGAACCAGAGCGATGGCAATGACTTCCTTCTACAGACATATATCAAGGAGCAGGCGCTACAGCATGCAAAGATAAAGCAGAGTCAATTCAGTCACAGCTACCTAGTGACCTCCACGTCTACGTCCACATCTACATTGTCCTGTAGCGTAAGCAGCTTTGCGGCAACGCCTATTGTTAACAACAATGTGATTGTTAGGGAGATGCCGATTATTGAAGTGCATGAAGTTAAGACACCAGAATTGTCATCACCAGTAAATCCTATTAAATACCCTGAAGAATGCTTGGAAATTGAAACACATTCGAATCAAGAGAAGTTAGTCACAGCACCGATCCCATCGGGATGTGTATTTGTGCCTGCCTCTGTCGCTGTTTCAACAACCAAATCTTCAAGCACTGAGATTCAACAGCTTCACAATGCCAATTTGCCTGCAGCAGTTCAAAAGCCAGATGCCACCGATTTTAGCGGCGTTCTaagtaagaacaacaacaaatgcaatgaatCCAGCGTGCAGACAAGAACTGTAGTCGTAGGAGAGGATGGTTTCAAAGTGTCaccaagcaacaataacagcaatactTCCGAAATACAacctgcagcaacagcagcaggagcaacttTTAAAAGTCGTGTagtgccaccaccaccgccgacCATTGGAAGTGATGCGCGACCCACTTGCATAGTTTGCAACAAGACATTTCAGCGCCAGCATCAACTTACACTGCACATGAACATCCACTATATGGAGCGCAAGTTTAAGTGTGAGCCATGTAGCATCTCATTTCGTACGCAGGGTCATCTGCAGAAGCATGAGAGAAGCGAGGCGCACAGAAACAAAGTGATGATGACATCAACTTTTGGTGTTCCGACCACATCAAATCCTCGCCCATTCGAGTGCACCGATTGCAAGATTGCGTTTCGCATCCATGGCCATTTGGCAAAGCATTTGCGTTCCAAGACACATGTCCAAAAATTGGAGTGCCTGCAAAAGCTGCCATTTGGCACGTACGCTGAGATCGAGCGCGCTGGAATCAGTTTAACGGAGATCGATACAAGCGATTGTGAAAATTCGCTTATTTCATTAAAGCTTCTAGCACAGAAATTGGTCGAAAAGGATCCCACTAAGTTGAGTGGCTACACAACACCATCAGGAATGCTGCAGTTAGCTACGGACACACCTGCTGGTGGCCAGGACAGTGCTTCCGAGGATGGCTTCAGTGCAGCAAACAGTGCAGCTGCCTCGGCAATTGCCTCCCTGGACAATGACAGTGCAGGTAACACACCAAAGCGAGCCAGCTCCATGTCCGAAGATGAGACGATTACCAACGGTTTGGGTATCGGACTATCTCACACTCAAAGTCATGACCATAATTTAAAACGCCGTCTACCAAACGGCGTCAGTTTCAGCAGTAATGGCGATGAGAGTGATAATCCACCGGATtcaggcagcggcagcaacgaGAAACGGGCACGAAGCAACACAGACGAATTTCCACTGCCAGTGGCTGCttcaacaacggcaacagcaagcaattga
- Protein Sequence
- MTTEQNASIADGWTNSNNLRYLHKKFKRLASTTESDKCNGAAVRTTSLSSNSSLSPPLPPRMSTVVMPLTTPMPNGHMPLKVAPFSPANSEFGVNLEYANNNNNCQEESNSNKMMIAAGAPRTRTPLSNSNSHINFVSNATVSPATFAQHQQQTQPTALTSATTISSTTTTTTVSTTTISQTPAAAQGEKSSRFVCPFCNMICAKPSVLQKHIRAHTNERPYPCDNCGIAFKTKSNLYKHCRSRSHVARVRGLEVPTNETDGLSDQDGDGELSNSSSELLSVEILSRTNSPYDDAIPSPTPSPSTLSAAKSAYLQQPQLQQHMQQLPLGSPAAGTLPPAPPTDPLHSATAQHRLSLDYKPYKPKFHNAALYVPGSISKDQQQQHTLHQQQKQQIEQQQMLQTQQQQIKLSTQQQQQQQQPSLTHPTLSPSTQMKLNNHINSHQMQLQLQHQQQQQLHAQQSLLLAATANPVALSALPPPPPIPAGVFYLGQPPYYNPTAAAMHQHAIAIQQLQFQQHFQLQQQQHHQHQQQQHQQHLQEKQQQHSPILKPPPQQQQVPQQQQPLHLPPQQPQQLLVRSNSQQSAVITTTAGLPAPATPTPPTNLSSFTCSSGGMQLNVEKVQEHISNLISQNEAIVENKELLLQKKYPKQLNRSRSFNCATNSSSNSNSNSNSNISNSNTTAAYTNNHNNNNSSSQQLVGAKVNLAHAIVQKQQQQHMQHQLHQQQQQQHQLYLHQQQLEPVNGLIKRSSSTATCDNVNVKVPSIPTLTPNMKFQQLPPPPSPIPQPLQQLQYRQDPTTPVPKLEQQQSLAPNHAQPLNLSAKFKPVITMPIKATGTLAPTASSASLSKITTIALAAPPNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICANEFRSADELKHHNSTYCQDANSSTPISPASSPSTKFFRSNSITFSLPELKSHMANSKNPLSLAKLAWSQLKTKPSSLVLSRLSAAQSPARTSTVTAAINSSSSSTSCSNTNTNNNNSFTINKITNIPATAVAIPPSIDSSNVALRFVDAPLPSPGPLLGKTPLVDYAAPRKAPDAQVIITKMHEDRLENMIVETPSKRAKISDENPATAFTLSAVVADMLFGGNQELQFGAKEERLRRFTSSGGTMIPISECPELDKSPKMIRTPLLSGGSFQEMSPRLTDAKERKLPTNSNNGLLVINTSSTHQHFQFPPINSITAFNPLTLPPMSKNNRSNSNNSGSNVRIGDANKTIPYVPGIPGPGSLSLLPPPQQHQRGSSPNRKQPSPNHNHNSLLAGVENPLKALSPFGGVQNLPSEFSRQPPTPTQRHALQWNNRNTTNKTLALITGDNTLSKKLPLKNLEQQQSQVQLQTPTPVLQEVRHFNFESVNNVTQEALAPLHVDTPNEAVIKTTKLATTIAVTTTSAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGLKPKQVIGLYDSRQKMLGAGSFTAMAGKDKLHYSLVSSQQIVSTSSMTSNGVNKNHQHQLKPLPSIGALSEANIAAKASEEAAAKKMESGQLLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPADGDFLDVDVDFDQQSSTSAGGRTSSMAGESDSEDYSDNESESSDTDESKSRIKEHEAARGLLSLSMTPPIPLSTSPYPASVQDTPMPAGSPANSVGSSAGSTAGGSQPKRQVCSFTSPKPPFDYQKQEQYYSNPEESKPKRGVPNDEGSAPMDLTKPRTMPSILEGLELLHKSNAEQMRDVIFGVGNNESGFMKTLISVSDKVRISAEMDEQVKNQSDGNDFLLQTYIKEQALQHAKIKQSQFSHSYLVTSTSTSTSTLSCSVSSFAATPIVNNNVIVREMPIIEVHEVKTPELSSPVNPIKYPEECLEIETHSNQEKLVTAPIPSGCVFVPASVAVSTTKSSSTEIQQLHNANLPAAVQKPDATDFSGVLSKNNNKCNESSVQTRTVVVGEDGFKVSPSNNNSNTSEIQPAATAAGATFKSRVVPPPPPTIGSDARPTCIVCNKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHRNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLVEKDPTKLSGYTTPSGMLQLATDTPAGGQDSASEDGFSAANSAAASAIASLDNDSAGNTPKRASSMSEDETITNGLGIGLSHTQSHDHNLKRRLPNGVSFSSNGDESDNPPDSGSGSNEKRARSNTDEFPLPVAASTTATASN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01322157;
- 90% Identity
- -
- 80% Identity
- -