Scal014302.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza caliginosa
Gene Symbol
hang
Assembly
GCA_035044725.1
Location
JAWNNR010001052.1:5646-21118[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.36 23 5.6 1.0 3 23 577 598 576 598 0.93
2 18 1 68 4.1 3.2 3 22 705 724 703 724 0.89
3 18 0.00077 0.05 13.9 3.3 1 22 821 842 821 844 0.90
4 18 0.089 5.8 7.5 0.1 2 21 856 875 855 876 0.93
5 18 0.0009 0.058 13.7 0.2 2 23 1010 1032 1009 1032 0.95
6 18 0.0026 0.17 12.3 0.1 1 23 1040 1063 1040 1063 0.96
7 18 0.0033 0.21 12.0 0.1 3 23 1151 1171 1150 1171 0.93
8 18 0.00037 0.024 15.0 2.9 2 23 1282 1304 1281 1304 0.97
9 18 0.029 1.9 9.0 0.2 2 23 1313 1335 1312 1335 0.95
10 18 0.0017 0.11 12.8 0.3 1 23 1348 1371 1348 1371 0.97
11 18 0.00016 0.011 16.1 1.1 1 23 1422 1444 1422 1444 0.99
12 18 0.0025 0.16 12.3 0.9 1 23 1452 1475 1452 1475 0.96
13 18 0.088 5.7 7.5 0.4 2 19 1483 1500 1483 1501 0.94
14 18 0.0002 0.013 15.8 0.3 3 23 1602 1622 1601 1622 0.97
15 18 0.0014 0.088 13.2 0.1 1 23 1657 1679 1657 1679 0.97
16 18 0.00077 0.05 14.0 0.6 2 23 1764 1786 1763 1786 0.93
17 18 0.062 4 8.0 1.4 3 23 1842 1862 1842 1862 0.98
18 18 4.7e-05 0.0031 17.8 2.5 1 23 2319 2341 2319 2341 0.99

Sequence Information

Coding Sequence
atgtgcgaCGCtgtcgcaacaacaatagcagcaatacCAGGAACAGGAGTAAGCGGAGCGGGCGATACAACGATGGAAGAACAAAatcagcgacagcgacaaagCTGCTGTCGTTTATGCATTGCTCCCGCCAGCGAATGCATTTCGATTATTAACAGTTATGCGGCCGATAAGGAGCCGCTGGCCACTAAAATACACAACTGCGTAAATATCAAGATCACATCCGTGGATCGTTTATCGCTGCATATTTGTCATGCCTGCATCAGTTATTTAAACTCTTggcaaagctttaaaaatcGCTGCCTCAGCTCACAGACAAAGCAGCGTCAATGGCTGGAGAACGATAAGTCCAAACAGCAGACCCTGCTCGGATACTTGGATTTGAATAGGGCCGAGAATGGCGGTGGTGCCAGTGAACAGCACACCacccaccaacagcagcatcagcaacacgAATTGAAAATCGACTCAGCGACGAGTGCAGCTGAAAAGGCGTCCGCCGCCGCCAACATTTTGGATGGCATACCTCAACTGAAGAAACGCAAATCGTTAACAGTTTATGTGAGTCCAAAGCAACAGCttctacaacagcaacaatcgcagcagcttcagcagcaacaaaaaacgctacaacaatcacagcaacaacagcttcagcagcagcagcagcaagcacagAAACAGCAtgcaacgacgacaacaacaacagcagcagcagcagcagtagcagacaCAACAAGCGCAACGGCAGCGGCGACGGCGCCAGAGTCACTTCAAACATTACAAACCCTTTTGTTGCAGGTGCCCACAGcgacaacacaacagcaacagcagcgaaaatatcaacaccaacaacagcagcagcaacgtggcaaacagcaacagcagcaacatcatcatcaccatcatcagccacagcaacattatcatcatcatcgtcctcatcaacagcagcgacaaagtCGCATTCGTCAACCGcgacgccagcaacagcaacagcaccaacaaccgCAACcatcaacacaacaacaacaacaacaacatgctaCAACATCATCCATACAGCGGTTATCCGGCAAATTGAAGCCGAAATTGTATTTGCCATTGGATATAACAGTGCCACCGTTGCCACCATtattgccgccgccgccgctgctgcagtcGGCCACAttgtcagctgttgttgctgatgtagcagcgccgttgccattgccgttgtcgttgccacTTGATTTCAGCCAAAatccaataccaataccaaatccaaatccaaatcatATTCAAAGGCAAGCGACGCccttgccgttgccgttgccctTGCCATTGCCGCCGACGCCGCAGCTGCCTccagttgctgcaacaatgACCAGCAACATTTCTGACACTGCTTTGGCCTcggccactgccactgcctcGACCACTCTTGGCTCTGGCGGTGCAGTCACAACTCCATTGCTTATGCCACCGCTGCCTGCTGTGCCCATCAAGGATGAGCCTCTGGACGATACGGATGATGATTTTCAAATGAAGTGCATCGATGAATCCGATGACATGATGGATCCAACAATGTTCCTAGAGCGCTCCGAACATGAGGGCGATGTGCCACTTAATACCTCCGACTATGATTATACGGCTCAACATTGCGTGACGgcagtggcggcggcggcatcaTTACCCGCAAGCGCTGTTGCAAATGTGGCAGCCGCTGGCGATTCCAAGGTGGCCAGCTGCCGTGCCTGCAGTCTACAGTTCTCGACGCGAGCAAATGCGCGACGCCACGAGCGCAATTTGCACCCGAATCTGTTCCAATTGTCGACAGACTCACCAAATAATACGCCAATAACAAAGCCGACACCAGCATTGGCGGCCGCCTTGGAGATACAGCGtgcagctgccgccgccgcagcgACGGCtgaggcaacaaaagcagcagccggTGGCAATATATCGGCACAAAAGTATCGCCAGGTGGTCATGAATACGTTTATCAAGTGCGAAAACGGTGGCTTCGACTACGACAATCCCGAACAGTATCAGCAACTGTTGTCGCGCGACAAGGTCGACTTCATCAATGAGAACAATGAGTTTCTGGAGCAGTATCAGACAATGACTTGTCGCTGTTGCAACAAATACTTCAACACCTACAAGAACTTTATGGCACATGTGCGCAAAAAGTATCCATTGTTGCCGCGCAACCTGTGCTTCAACTGTCTGAAGATGAATGATTCCAAGGCGTTGTTCATATCGCATTTGAAGAAGCGCAACTGCATCAATCTATATCGTGTGCTCAATGCACTGCGCACGAAGCAACCAAACTTTGTCCATGCCGCCAGCGCAGAAACTAGCGCTGCGACGCCTctagcagctacagcagcatcAGTGTCGTCAACGGCGGCACACGAAACATCAACGGATCGTCCAGAGAAGCTGCGTGCCAAGGAGCTGCTGGTCAATAAACTGTACGAGTGCAAGTTATGCCCGAAAGGTTTTCGCACCAAGCACGAGTTTCGCACGCATGTCTACGATAAGCATGCAGATGTGCAGCGCAAGGATAACAATTCGATACAGTGCAGCTTCTGTGGCTTGGACTTTGCCGATCCGGTGGATAGACGTCGCCATTATAATAATATGGATTGCATTGTGCGATTGCGCTGCATGACCTGTGATGCCAAACTGGAGACGCATCAGCGTTTTCTCGATCATGTGTATCAGGATCATTTGGGTGGTGTAAGCAGTGATAATGCGTCGACGGCGACAAGTGGCTTGGATCATTCGCCGCCGGGCAAGCGTAGCCTATTGGGTGCTTTGGGCATTGGTTCGAATGATGAATCACGTAGCAGTGGCAGCCAtcataataacaacagtaacaacaacaacaaagacaacaatgcaacagcagcagcagcagctgctggaggAACGCCCTTAACGTCAACACCAAAActtgcagcagccgcaactaGCGGTGGCTCTGCATCAGGCGGACGCGATGCACCCAAATCGCAGTATTTTTCACGAATGCCACAGGTCTGCCCGATCTGTGGACAGCAGTACAATAACTATAACAATGTGCTGCGTCACATGGAATCGAAGCATCCCAACAAACTGCCAGAGACATATAAATGTGTACGCTGTGGCCTGGGCTATCCGCGCATCTCCTATCTGCGCGAGCACATGATCAATGTGCATGGTGTGGACAAGAATCGTCATTCAGGTGGCTTTGAGTATATTGTGAATGCCGATGCTGTTAAATTGGCCGATGGCAGCACGCCCAATGTCTATACGGGACGTTACGATTATGTGATGAAGGATTTAATATCAATAAACAATGGTGGGACACTcgatgatgatgatgaggaaaGCGGCAGCGTTGCCAAGAAGATGCGTTTGGAtgatagcagcaacaacagcagcattgccaacatgAGCATTGCCAATCAGCAAAAAGAGTGCATCATCTGCAATGCGGTGTTTAGCAATAATATTGGTCTTTCGAATCATATGCGTTCGCATTATACGGCCTCAACAACGACAAGTGCCGCATTAGCGGCGGCCAATCGCATGACGCCCAAATCATTGACAATAACGGCAACGCCACCGTTGGATAccgttgcagcaacaacatccacaGGCAGTGCATCAGCGACGGcggcaacagcatcagcgACATCCACATCGACGAGTACAACAAAGcacgcagcaacaacagctggtgGTTTAGCAGGCGCAAAAATATCTGGAAGTGGCAGCGTACCGCCAGCGATGGCCCATCAGACAGCACAGGAACAAGCGGTATTCCGTCGTAGCTTGGATCAGGCAGCTGATCGACGATTCCGTCGCATGCGTTGTCGCATTTGTCAGCGACGATTTAGTTCAAAGAAATCGTATCGCTATCACATGCTCACCGATCATCAGGTGCAGAATGTGCAGTTTATCAAGTGCAAGTTATGTAATGCCGAATTTGCCTACGAGAAGGGCTTGAAGGTGCATCTGTTTAAGGTGCACGGACGAGCCATTAAGGATGAGATGATTGTCAAACAATTCGAATGCGATGTCTGCTCCACTGTCTACAGTTCCGAACTGGaattgcagcagcacaagcgCAGTGTTCACAAGTCCAGCCATTCGATAGCCAGTGATTCAGCTGCTGgcaaatcaacaacatcatcgtcatcaacATCGAAATCTGCTACGGCTACCTCAGCTGAACTGGCTGCCGACACATCTGGCATCGCGGCGGCAGCAGTTCTGCCGCTTTACTGGTACCAGTGCAAGTATTGTCCATCCAACTTTAACACCAACAAGAAACTGGCCATACACATTAATTCGCACGATGAGTTCGATTCGAATGATTATTCGTGCAAGGATTGTGGCAATGTTTATAGTGGTCGCAAGAGCCTTTGGGTTCATCGCTATAAGAAGCATCCGCAGGTGCCGGATCCGGCGGAGTGTACGCTGTGCCGCAAGATGTTCTTTGATCGCCAAATGCTGGAGAATCATACACCAACCTGCAATCGCAAACCAATCACTGCCACTGGTGCTCATCAGCAGcaggatcagcagcagcaattgaatttgcaacATCAGCGCGTCGTCTTCAAGCACAAAACGGGCGATGATGAGGacgatgatggtgatgatgatgatcagcttctgctgcttgatgatggtggtggtagtggtggtggaggcggcgttggtggtggtggcagtgatagtaatggtggtggtggtgttggtgctgcaactgctgcagccaCAATAAATACAAGCACAATGAAGATACGCATACCTGAGGTGGCATGCACCATTTGTGGTGCACGTTTCACCGATCAGGAAATGTTTAGCAAACACATCGAGAAGCATGAACAAGAGCTCTATGTTGACAATCCATTGGCGGCTATGTTCGATGATGGCCCAGCCGATGCTGGACAATTTCAGGTTGAGCGTCAAAATGAGAATGGCGAATATGCGTGCGATTTGTGCACCAAGACGTTCCCGCAGGTGATAGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCAACCATCGACGGCGAAGCGACAACgttgaacagcagcagcaacaacaacaacaacaacaattcccTGAGCTCATCATCGATGCTGCATCTGCGCGAATTGCATGCGGTGGGCCTGATGcccaaccagcaacagcaccagaaacagcaacaacaacaacaacagcaacagcagcagcaacaacaacaacgatcgAGCAGCAAATCAATGAAACGGAAACGTGAATTGAAATGCGAATATTGCGCCTCCACAttcattagcaacaacaatctgcGTCGCCACATGTACGAGCTGCACAAGCACGAGGTCAGCAATCTGCCGGAGCCGCCCGTTATTGAGGTGGATGAGCCGTTGACGTGTCGCCGTTGCGGTGATTTACAGTTTGAGACCAAAGAATTATGGATCGAGCATAAAATGGCCGATGCGAAAGTTGTGCGTCCCTTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTATTTGTCGCGCAAAGAGAAGCTCCTCAATCACATTCACAATCATCTCAAGGAGGATGTGATTGTGCCGGTGGCAACCACTAAGccaacaccagcaccagcaccaaaagcagcagcagcagcagcaacaacagcaacaacaacagcagcgacagctaAGGCAACAACATCCGCTGCAACATCGACAGCAAGTGCAactgccacaacagcaaaagcaaaagcagcgacggcagcaacagcagcgacagcaacaaaagatcTTAAGGCTAATAAACAACATCAGAGGAATCAGGCAGAAGCAGAGACGGAAATGGAGACAGAggctaatgatgatgatgtaaaGTTGGCAAAGGAGCGTGATAGTGAtatggatgatgatgagagcGATAGTGgtggcgatgatgatgagggcAATAGTACCAGTGCTGaagatgatgctgatgatgatgacgacgatgaggaggatgatgaAGAGGGCGAtgttgacgatgatgatgatgatgatgatgaggaagacgatgacgacgaagatgatgatgatgaagtaGAGGTCGCTGGTAATGCTGTGGCAcaggcaagcaacagcaacaagaacaacaacaataataataataataatagcactATTGTtgataacgatgatgatgacctCATCGAGGAGGTAATCGATGAGgatggcattgttgttgagcagctcgacgatgatgatgaagaagatgacgaggacgatgatgatgacattgatgaggatgatgttgatgatgatggtcaacaacagcaagcactacagccacagcagcagcagcagcagccgacaAGGCGTCTCAATTTCAACTATTCACGCACCAACAGCAATcgcaccaataacaacaacaacaacagcagcagcagcgcccaGTTAAATGGCAACGGTGGCAAACAGGCAGAAGCGGTAGATAATGGGGGAGAGGAGGTGGATGATATGGAtagcgacgatgatgatgaagatgatgctGTGGGCGAGGCGATGACCATTGATGATATTATCGAAGAAGATGATGGTGTGGATGatattgatgatgatggtgtcGTCGTCGGTGTCGGCGGTGGTATTGTTgaggatgatgacgacgacgatgacaatgatgatgatgatgatgatgatgatggcgatgtTGGTGAGGACATggatgatgaggaggatgatgatgatggcggcAATGTCGTGGGCAATGGTGTTGTTGATCGTAATgctggcgatggcgatggcgatggcgatggcgatggtaCAACATCCACATCGGAAAGCGagtcgacagcaacaacaatatcgcATTCAACAACTGGTGAGCGGcgtaatataataaaaaaaaataagaaaatattagTTGCATCAGCGGTAGATGGCGCTGCCGCTGATCACACTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCAACTGCAGACACATATTAAAAGTCATTTCCTCAATGGACCATCATCGGCGGGAAGTggcggtagcagcagcagcagcaatagtaaTAGCAATAGCCATAGCATAagcataagcaaaagcaaaagcaccaataccaataacaacaacaacagcagcagcagcagcagtaacaaaaccaaaaccaaaaagtccAGCTTGGAAGCaacgaagacaacaacaacaacagcgagttCAGCGACGGGCTCAAACTGA
Protein Sequence
MCDAVATTIAAIPGTGVSGAGDTTMEEQNQRQRQSCCRLCIAPASECISIINSYAADKEPLATKIHNCVNIKITSVDRLSLHICHACISYLNSWQSFKNRCLSSQTKQRQWLENDKSKQQTLLGYLDLNRAENGGGASEQHTTHQQQHQQHELKIDSATSAAEKASAAANILDGIPQLKKRKSLTVYVSPKQQLLQQQQSQQLQQQQKTLQQSQQQQLQQQQQQAQKQHATTTTTTAAAAAVADTTSATAAATAPESLQTLQTLLLQVPTATTQQQQQRKYQHQQQQQQRGKQQQQQHHHHHHQPQQHYHHHRPHQQQRQSRIRQPRRQQQQQHQQPQPSTQQQQQQHATTSSIQRLSGKLKPKLYLPLDITVPPLPPLLPPPPLLQSATLSAVVADVAAPLPLPLSLPLDFSQNPIPIPNPNPNHIQRQATPLPLPLPLPLPPTPQLPPVAATMTSNISDTALASATATASTTLGSGGAVTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLNTSDYDYTAQHCVTAVAAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISAQKYRQVVMNTFIKCENGGFDYDNPEQYQQLLSRDKVDFINENNEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRTKQPNFVHAASAETSAATPLAATAASVSSTAAHETSTDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTATSGLDHSPPGKRSLLGALGIGSNDESRSSGSHHNNNSNNNNKDNNATAAAAAAGGTPLTSTPKLAAAATSGGSASGGRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLISINNGGTLDDDDEESGSVAKKMRLDDSSNNSSIANMSIANQQKECIICNAVFSNNIGLSNHMRSHYTASTTTSAALAAANRMTPKSLTITATPPLDTVAATTSTGSASATAATASATSTSTSTTKHAATTAGGLAGAKISGSGSVPPAMAHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSTVYSSELELQQHKRSVHKSSHSIASDSAAGKSTTSSSSTSKSATATSAELAADTSGIAAAAVLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQQDQQQQLNLQHQRVVFKHKTGDDEDDDGDDDDQLLLLDDGGGSGGGGGVGGGGSDSNGGGGVGAATAAATINTSTMKIRIPEVACTICGARFTDQEMFSKHIEKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCTKTFPQVIALKVHRKWHFRGDSKQNPTIDGEATTLNSSSNNNNNNNSLSSSSMLHLRELHAVGLMPNQQQHQKQQQQQQQQQQQQQQQRSSSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLTCRRCGDLQFETKELWIEHKMADAKVVRPFCPFQWGCDLCGEYLSRKEKLLNHIHNHLKEDVIVPVATTKPTPAPAPKAAAAAATTATTTAATAKATTSAATSTASATATTAKAKAATAATAATATKDLKANKQHQRNQAEAETEMETEANDDDVKLAKERDSDMDDDESDSGGDDDEGNSTSAEDDADDDDDDEEDDEEGDVDDDDDDDDEEDDDDEDDDDEVEVAGNAVAQASNSNKNNNNNNNNNSTIVDNDDDDLIEEVIDEDGIVVEQLDDDDEEDDEDDDDDIDEDDVDDDGQQQQALQPQQQQQQPTRRLNFNYSRTNSNRTNNNNNNSSSSAQLNGNGGKQAEAVDNGGEEVDDMDSDDDDEDDAVGEAMTIDDIIEEDDGVDDIDDDGVVVGVGGGIVEDDDDDDDNDDDDDDDDGDVGEDMDDEEDDDDGGNVVGNGVVDRNAGDGDGDGDGDGTTSTSESESTATTISHSTTGERRNIIKKNKKILVASAVDGAAADHTNSSYTCDLCQLCFDSQEQLQTHIKSHFLNGPSSAGSGGSSSSSNSNSNSHSISISKSKSTNTNNNNNSSSSSSNKTKTKKSSLEATKTTTTTASSATGSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01325809;
90% Identity
-
80% Identity
-