Scal000268.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- crm
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000008.1:277950-281342[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-06 0.001 19.0 0.0 2 44 116 171 115 173 0.94 2 2 0.081 67 3.6 0.0 8 28 294 315 291 320 0.83
Sequence Information
- Coding Sequence
- ATGGAAGACAACGGCAGCATGTGTAAAAATGTTAAGCTTCCAGACGACgctgctgcatctgctgtTGTCATCACCGCCACAAGCATCAACAACGATGCACTGCTCAACGGCAAGGTTGTTCAGTTCAAGCTGGCAGCCAGGTCTGCAGCCGAGCAGCCGGAGGAGTTGCTCGGCTCGGTGACGTCACAGAATTGCCCAGGCACGCGGGCAAGTGCGCGTGTCATACAAAAAATGAAGCTAGATCAGACGCGGCCAATGACACCGCCACCAGCGGAACGTGAGCCCAGCAAAAAGGATGAGAAGGCTGCCCAAAAGACGCCGTCACAGATGCGTGCCGCCAACAAGACGACCTGGACTAATGTGGAGCGCAATTGTTTCTTTGATGCGCTCAACGAGGTTGGCAAGGATTTCGAAGCGATGGCCAATTGCATCAATACCAAATTGAAACGACGCAATACTAGCAACGATTATAGCTTCAAATCAAAGGATCAAGTGCGTCAGCATTACTATCAAACATATCACAAAATTGGCAAATATGTGCGCTACTCCGATGagctAAGAAAACCCGCCCAGGAGCTGTACACGCTGATTAACTATGGTGAAATGCGTCGCAAGCTGCAGTTTCTAACCGAGAAGCACTTCATGAAATTGAAACAGCTCATCTATCAGGGTCACATCACAGTGCGTTGCAAGGGCAAAAATATACGCATCAAGACGCCTTCCTGCAAGGCATTGCGTCGTCTCAATCAGCTCGATGATACATTGGAGGACATACGATTGCCCACGAAAATCGAAGTGCTTGTGAGTCCCGCCAATATGGAGGCATTTGGACGTGTTCAGTCATTGGCACAGAATCCACGCATACGTGCCACAGTGCCGCTgcacaaaaaactaataagcTTCATACAAACATTTCAGTACAAATGGCGCAGCATTGATGCACGCTTGGCggaaaggcaacagcagctactcaatggcagcggcggtggcggtggcggtggtggtggcggagCTGGCACAGAAGCGTCAGTCGCTGCGGAGATACTAACGGCAAATGAGCCAGCTTTGTGTTTTCTGCCCAAGCCCGGTGTGGCCATACATCGTCCGTTGCTGAGCATAACGGCGCATTTGAGCAGCGTCAACATCTGCCTCACAGCGTACGAGGAACGGCTGGGCGTCAAGGTGCGCAGCGAGACGCTCGATAgtacggcagcggcagctgctgccagcgcAAAGCGAGCGCGCACCGAAAGCGGTTCCGAGAAACGTTCGCCCGAGGCCAAGAAACTCAAGCCATTGGCGGAGAAGTCCCACAGCGAACTACTCAATGAGAGCAGCCAAGCGTTAAAGCTGGAGAACAGCAGCGGCGATGAGCTGGGCGAGGATCTTATTGAGCTGCTCAATCTAACGATCAATGGCAGTGAACTGAATGCTTCgactgttgcaacagcagccacagcaccagcagcacaaACGGCGCCGGCGCCACCCACACGTGGCAAACGTAACGATGCCCTGGGCACTGGCGCTGGTAAGAGCGGCAAAGCGAATGCTGCCGCACGCAACTTTCGGCCACTGCTCAGCGACGATGTGATCAAGCGTATGCGCAAGGGTTGGACCATGTTGAATGCGGCAGACATAACCATTGGTGATTTGTATGTGGTGCTGGGGCAGGATTCCAAGCTGGAGCTAGACTACTACTGGTGCGATGTTGAGCTAAGCACGTCGAGCAGCACAACGATAGCCAGCGTCAATActattgcaacaacaactagcagcagcagcagcagcagcactagtGTCGGTGTTAGTGTCAGCATGTCAAACGCAGCTttagcaacatcagcaacagcgcTGCCCTACAATGTCAATGACTGTGATAGCGTGGAACGCGTTAAGGCCATCACAACTTCCACGGTTAGCAATAAGCTCAAGCATCTTTTGCTCATCTCGAATCTAAGCGAACGTGTGCGCAAACGTCAATGCAGCTGTGGCCATAGCTGTGATCGCAAGACCAAGGCACAATGGATGAGCAGTTTGGCCAGCCAGCAgtctggtgctgctgctgctgtgggttCAACTACAGCAGTCGTTGCCGCTAGTACGGGGCCATCAACGGCAATCGCGACGACTTTAACCGATGGCAATGAGGTGGTCTTTCGCACACCCATGCTGCCAGTGCGTCGACCCATAGTCAATATTATTGATCCAAGTCGACAATTGTCCAAGctAACGCGTCAGAAGATGTCGCGTCAGGTGTTGGTGCAACGTCTTCTGCAGCCGCCAGATTCTGGATCTCAATCTTATGATTTGCTGAATTTACAAAACGGTCTCTTTGAGCCCATCGAACGtgtcagcatcagcagcagcagtagcagcagcggcaacagccacagccacaacaataGTGGTAGCAACAGAATAAACTCAACAATCCTCCCACGAACTGTATCTTCCAAAAATAGCTTCAGAAACAACTCCAAAAACACTGCAAAAAGCAACTCCAAATCCGGTAGCAGTCGCAATAGCGGCATTTCACATCAAATTGATGGCATTAAATCATActacagcagcagtggcagcggcagcgattGTTCCGGTAGCTTGGATATGCCTAGCTTAGATATGCCCAGATTGGATCTGATTGTGGAGACGCCAGCGCCAACAGTCACAAGCATTGCTTCCACCACGTCCAATGCATTGCCAGAGGGCGTTCAAGATGAGAGCACCATGCACAGCTTATTCAATGGCAATGTCAGTCCGAATCATTTATTACGCGATTCCACATCAAATGCACGCTGGCTGGAGGAGAACATTAATGACTTTTCGCTGACCAGCCTGCTGGGCCATCTGGATGACTTTGATGCCACACGCGACATACTGGATCCATCATCGAGTCTGTCGGTGATTAGCGAGACCAGCGTCGATTATCGTCACAAATTTCAGGAGATTTCAgcgctgctgcaacagcaggaaAAGGATTAG
- Protein Sequence
- MEDNGSMCKNVKLPDDAAASAVVITATSINNDALLNGKVVQFKLAARSAAEQPEELLGSVTSQNCPGTRASARVIQKMKLDQTRPMTPPPAEREPSKKDEKAAQKTPSQMRAANKTTWTNVERNCFFDALNEVGKDFEAMANCINTKLKRRNTSNDYSFKSKDQVRQHYYQTYHKIGKYVRYSDELRKPAQELYTLINYGEMRRKLQFLTEKHFMKLKQLIYQGHITVRCKGKNIRIKTPSCKALRRLNQLDDTLEDIRLPTKIEVLVSPANMEAFGRVQSLAQNPRIRATVPLHKKLISFIQTFQYKWRSIDARLAERQQQLLNGSGGGGGGGGGGAGTEASVAAEILTANEPALCFLPKPGVAIHRPLLSITAHLSSVNICLTAYEERLGVKVRSETLDSTAAAAAASAKRARTESGSEKRSPEAKKLKPLAEKSHSELLNESSQALKLENSSGDELGEDLIELLNLTINGSELNASTVATAATAPAAQTAPAPPTRGKRNDALGTGAGKSGKANAAARNFRPLLSDDVIKRMRKGWTMLNAADITIGDLYVVLGQDSKLELDYYWCDVELSTSSSTTIASVNTIATTTSSSSSSSTSVGVSVSMSNAALATSATALPYNVNDCDSVERVKAITTSTVSNKLKHLLLISNLSERVRKRQCSCGHSCDRKTKAQWMSSLASQQSGAAAAVGSTTAVVAASTGPSTAIATTLTDGNEVVFRTPMLPVRRPIVNIIDPSRQLSKLTRQKMSRQVLVQRLLQPPDSGSQSYDLLNLQNGLFEPIERVSISSSSSSSGNSHSHNNSGSNRINSTILPRTVSSKNSFRNNSKNTAKSNSKSGSSRNSGISHQIDGIKSYYSSSGSGSDCSGSLDMPSLDMPRLDLIVETPAPTVTSIASTTSNALPEGVQDESTMHSLFNGNVSPNHLLRDSTSNARWLEENINDFSLTSLLGHLDDFDATRDILDPSSSLSVISETSVDYRHKFQEISALLQQQEKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -