Scal009564.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- CDC5
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000546.1:24909-27189[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.9 4e+03 -2.1 0.0 3 18 136 151 134 152 0.88 2 5 2.1e-11 1.7e-08 34.3 0.0 3 39 230 267 228 274 0.91 3 5 0.00045 0.37 10.8 0.0 4 39 286 325 284 331 0.74 4 5 2.7e-06 0.0022 17.9 0.0 2 46 339 384 338 384 0.90 5 5 8.3e-11 6.8e-08 32.4 0.0 3 43 392 433 390 436 0.95
Sequence Information
- Coding Sequence
- ATGTGCGATCTGTTTAACAAAGGGTTGGATTACCAAAAGCAATTGCTGGAATTAGCTAAGCTGCTATCTGCCACTTCTCAAGGCGATGTAGATGCTCTACAGCTAAATCAGGCGCTTCAGCAATACCTTGAACAATTCCGTCAACAGACGCTGCAGCTGCTACAGAAAGTGCGAGCACGTTATAAACGTAACGAGGAGATACTTATAAGCCGACAAAAGGCGCGTTCTCACAACAATGAAGTCGTTGGAAAGAGCGGCGCAGTGCTTCGCGGGGGAACATTTCGATTTAAGGGTAATTTATATTTTCGTGATGCAGATGGACGAAGCTGTCCCAACAATGAAGACTACCAGAGTCGCAGCATCTATGAAATGTTTCCCACCGATTTCGATATGCGTTCCAAACACGTCTGGACTGTAATGGACAAGAAAAACATTGTTATGGGCGTTAAGCAACAGCTGTTGGATCATGCCGCATTCAGACCACAAAGCAGTACCAAGGGTAGGGGGCGCAAGCGCAAGGCCATCGATCTTTACCAGCATTCACTGGCCAAATTGCTAACTGTTGCGGATCGCAACTTTAGCATTGATTGGAATCAAATAAGCACACTGGACCTAGAATATCGACACTCTTCCTACAGCTGTGAGGCTATGTGGCTGGTGTATTTGCAGCCTCAGATCAAGCGCGCTGATTGGACAGCCGAGGAAGATCAAATTCTGCTGGCAGCTGCCAGGGAAAACAAGATGCAAAATTGGATAGCTATTGCATCGAAAGTAAAAGGCCGATCAGATTATCAGTGCTTTGTACGCGTGCAAACAACGCTGCGCCACAGCTTGGAGCCCGCCCAGGCCACGAAATGGTGCTATCAGGACAGCGAGCGTTTGTGTGCACTAGTCTTGAAGAATACGGTTAATGGCGTTGTTAACTGGTCCGAAGTGGCCGAACATTTTCCAAACAAATCGCGATCCACACTTATTGGACGCTATGTTTATAGTCTGAATCCAAATATTAGTCATGAACCCTTCACAAATGAAGAGGATGTAATGTTATTTGCTGCCGTTAAGGAATATGAtggcaaatttaattgctttccGCGCACGCTATTTCCCAATCGCTCACTGGCCCAGCTGCGCACACGTTATAAGAATGTACTGACCCAGCGTAATAAAGCAGATTCCTGGTCGGTTAAGGATGATGAAAATTTGATGGCTTTCGTTGCCAAACACGGAACATCGCAGTGGGTTAACTGTGCCAAACATTTGGGCAATCATTCGCGCACCAGCTGTCGCACACGATTTTTGGTAATCAAACGGTTTTTGGAGAAGCATCCAAATTCAACGGAAGCAGATTTGCCACGGCGCAAGACCCGTAAACAGGATGTTATCAACTCTGAAAATTGGGAGCAATGCTTACAAGAAATGCAAGCTGATCCAGATGCAGAGTTTGTCACaccaaagccaaatgcaaCGTTGGTAGGTTTaccacaaaacagcaacaacggccaGAATTCTTTgagtaaaattgaaattgatgaaAGTTGGGAGCTACGCTCACTGGACTCAAAACCGGAATTGTTGCCGTCAGTCCCAGATAAATTGTCCAGCTCGGATCAAGCCGTGTATGAGTACTTCATATACGCCTATAATCTCAATCTGCAATCGCCAGCAATTCCAATACCACTTCCacaggacaacaacaatttaaaagccGTAGCTTATGCGCTGCGATTTCAGCTACCTAGTCACAAGCGTATTATTGTAAGAAGCGCTTGCCTATCCACGCAGCTGTCGCTCAGCTATAAAAAAATTCTTTGTAAATTGCTGCCATGTGTGGAAGGTGAGACGGCGCCAAAGTTGCTGCCACCCAACTGGTCAACAATGATGGGATTTCGTGCCATGTGTATATTGTCAATGCGAACGCCTCTTAGCAACGAGGCAACAGAGCCCGAGCATAGTACCGATGCATCTCAGCCGGCGTTGCAGTTGTTTCGCCAACGTTTACGCACACTATTTTATCGCACGACTCTGTTAAGCCGCCTGGAGGTGACGCCGTTTGAGGAGCTGCCAAATGTGTTGAAGAAACTGCCAGACTTTATTGTAAAAGACGCCATGGAAAACAGCTCAGAACCAGCTGGCGAAGATACAGATTGCAAACAGGCAACTTAA
- Protein Sequence
- MCDLFNKGLDYQKQLLELAKLLSATSQGDVDALQLNQALQQYLEQFRQQTLQLLQKVRARYKRNEEILISRQKARSHNNEVVGKSGAVLRGGTFRFKGNLYFRDADGRSCPNNEDYQSRSIYEMFPTDFDMRSKHVWTVMDKKNIVMGVKQQLLDHAAFRPQSSTKGRGRKRKAIDLYQHSLAKLLTVADRNFSIDWNQISTLDLEYRHSSYSCEAMWLVYLQPQIKRADWTAEEDQILLAAARENKMQNWIAIASKVKGRSDYQCFVRVQTTLRHSLEPAQATKWCYQDSERLCALVLKNTVNGVVNWSEVAEHFPNKSRSTLIGRYVYSLNPNISHEPFTNEEDVMLFAAVKEYDGKFNCFPRTLFPNRSLAQLRTRYKNVLTQRNKADSWSVKDDENLMAFVAKHGTSQWVNCAKHLGNHSRTSCRTRFLVIKRFLEKHPNSTEADLPRRKTRKQDVINSENWEQCLQEMQADPDAEFVTPKPNATLVGLPQNSNNGQNSLSKIEIDESWELRSLDSKPELLPSVPDKLSSSDQAVYEYFIYAYNLNLQSPAIPIPLPQDNNNLKAVAYALRFQLPSHKRIIVRSACLSTQLSLSYKKILCKLLPCVEGETAPKLLPPNWSTMMGFRAMCILSMRTPLSNEATEPEHSTDASQPALQLFRQRLRTLFYRTTLLSRLEVTPFEELPNVLKKLPDFIVKDAMENSSEPAGEDTDCKQAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -