Scal003712.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- kn
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000165.1:255995-280129[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-233 2.5e-229 762.3 0.0 39 384 55 429 48 434 0.99 2 2 3.2e-06 0.013 13.7 16.1 424 520 436 531 429 553 0.55
Sequence Information
- Coding Sequence
- ATGGAGTGGGGCAGAAAGCTGTATCCCACCGCTGGACCCAGATCCGCCGGTGGCCTTATGTTCAGTTTGCCACCCACAGCGGCGGATATGAATCAGCCCAGGGGTCCAATGACATCGCTCAAAGAGGAGCCGCTTGGCGGCCGTTGGGCCATGCAACCCGTTGTGGATCAAAGCAAtttGGGCATTGGACGCGCCCATTTTGAGAAACAGCCGCCCAGCAATTTGCGTAAATCgaatttctttcattttgtgatTGCGCTCTACGATCGTGCCGGTCAGCCCATCGAGATTGAGCGCACGGCATTCATTGGTTTCATCGAGAAGGATTCGGAATCGGATGcgacaaagacaaacaatggCATACAATATcgtttgcaattgctttaTGCGAATGGCGCACGACAGGAGCAGGATATATTTGTCAGACTCATCGATTCGGTGACCAAAGCGgCTATCATCTATGAGGGCCAGGACAAGAATCCCGAGATGTGCCGTGTCCTTTTGACGCACGAAGTAATGTGCAGccgctgctgtgATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGATCCCGTCATTATTGATCGCTTCTTTCTCAAGTTTTTCTTGAAGTGCAATCAAAATTGCTTGAAAAATGCTGGCAATCCGCGAGACATGCGCCGATTTCAGGTTGTCATATCCACGCAGGTGGCCGTGGATGGACCACTCTTGGCTATCTCGGACAATATGTTTGTGCATAATAATTCAAAGCATGGCAGACGCGCCAAGCGATTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCACCGCTGCCTGTGGCGACACCCTGTATCAAGGCGATATCACCGAGCGAGGGCTGGACAACAGGTGGCGCCACAGTCATTATTGTTGGCGATAACTTCTTCGACGGCCTACAAGTGGTCTTTGGCACAATGCTGGTGTGGAGCGAGCTAATCACATCGCATGCGATAAGAGTGCAAACACCACCCAGACACATACCGGGTGTCGTTGAGGTGACGCTCTCGTACAAGAGCAAACAATTCTGCAAGGGATCACCCGGACGCTTTGTCTATGTCTCAGCACTCAATGAACCCACAATCGACTATGGCTTTCAGCGGCTACAGAAGCTCATACCACGACATCCCGGCGATCCGGAGAAACTGCAAAAGGAGATTATACTGAAACGTGCTGCCGATCTGGTCGAGGCACTCTACTCCATGCCCAGCAGATCACCCGGCGGCTCCACCAGCTTCAACTCCTATGCAGGCCAACTGGCGGTGAGCGTACAGGATGGCTCTGGCCAGTGGACCGAGGATGATTATCAGCGTGCCCAATCGAGCAGTGTTAGTCCACGTGGCGGCTACTGCAGCAGCGCCTCGACGCCACACAGTTCGGGCGGTTCGTATggggcaacggcaacgacggCCAGTGTGGCAGCCACTGCGAATGGTTATGCGCCAGCACCGAATATGGGCACACTGTCCTCATCGCCAGGCAGCGTCTTTAACTCCACATCAATGTCTGTGTCGACGCCTTGGCATTCGGCTCTGGTGCAGCATCATCATGTGAGTGCCGCAGCTGCCACAACCCATCATCATCCGCATCATCAttatccgcatccgcatcagCCGTGGCACAATCCGGctgtaacagcagcaacagcggcggcCGTATAA
- Protein Sequence
- MEWGRKLYPTAGPRSAGGLMFSLPPTAADMNQPRGPMTSLKEEPLGGRWAMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAATANGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHVSAAAATTHHHPHHHYPHPHQPWHNPAVTAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -