Scal007172.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- grh
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000317.1:3227964-3253065[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.032 5.2e+02 -0.4 2.9 86 111 224 249 176 304 0.57 2 2 2.8e-63 4.6e-59 199.3 0.5 24 221 641 833 627 835 0.93
Sequence Information
- Coding Sequence
- ATGATGCAGGATGCAACGAGCAGTTATGCCATCTCCTATACGGACTGGATAACGGAATCACGGCGCTATAGCCTggatcagcagcaacaaacgccGCCCCCAACGCACctacaacaccagcagcagcagcagcaacatccaGAGCTACATCATCTGGcaagtcatcatcatcagcatcatcagcaacaacatcatcattatggtAGTCAATCGCCACCGCATTACACGTATGAGCCACAAAAGGATGCAACACAGttagtgcaacaacaacaacatctgccCCTTACCGCCGCTGGGCTCATGCAATCTGTTGCTGCCGAGATACAGCTAAGCGAACAGCAAGCAACACCACCACCCCCTGCACCACACCCACCACTGGCACACGCCTCCAATGCCAACTACGCTGTCTACAACTACTACCGATCCGATGTCGATGTTGAAGtcgatgatgttgatgttgatcaccagcaacaacagcagcagcagcaacaggagcaaccacaacaagatCAGCTACTGTGGAGCAATGCGAACAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTCTGCTTGGTTCACACCCCTCATCGTCGGCCGCCACGACCGGCGTTGtctccacaacaacaatctcaaatcagcagcatcagcagcagcagcagcaacagcaacaacagcaacatcagcagcagcaacatcaacaacaacagcagcagcaacaacaacaacaacagccgacACATCCCAGCGATATTGTGACCATAACCACAGCGGGTGTGGGGAGCGCAGGCTCAATAGTCTCTGCAGccgtgcaacaacaacaacaacaacagcagcagcagcagcaacaacaacagttgctgagCATCAAACGTGAACCTGAAGATCTGAGCAAGGATCCTAAAAATGGCAATCTGGGCGCCGCAGCAAACGGTGGCGGTTCCGTCATAACGCAAAAGATATATCGCGTGGATGCAGCTAGTACTGAAGTTgaggcaactgcaactgcaactgcatttgAATTAAACGTTAAAAGAGCCGCAACTAGTCCCGCCAGAGCCACACCCGAACTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCAACGGCCCCAGCACACAGCAGAGCTCACTGCAGGCACAGAGTCCCAGTCCCGGGCCGTATATAACAACGGATAGCTATGGCATGTATGCGGCCAGCAGACTGCCGCCCGGTCCACCACCCGCCACCACATTCATAGCTGAACCCTATTATCGCGAATACTTTGCCTCCGATGGTCAGGGTGGCTATGTGCCCGCCGGCACGGCGCGTAGTCTCTATGGCGAGGATGTATCCGTTACGGCGTCAGCACAGCCACAGCCCGTGGGTGGTGTCTATGAGGCACGTTTCACCAGCAATGGGCCCACCACGACCACAGTGCTAACCAGCAGCAATTCACATCAGCAtcacaatcaacaacaacaacaacagcaacagcagcaacagcaggagcagtcGGGTAAAAGCGGCGGTACTCCATTGTATGCCAAGGCCATAACGGCGGCGGGTCTGACTGTCGATTTGCCCAGTCCTGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAGAATCACATACAGCAGTCCTTCGATTATACGGAACTGTGTCAGCCGGGTAGCTTAATTGATGCCAATGGCAGCATACCCGTTTCGGTTAACAGCATCCAGCAGCGTACTGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGATACAAGCACAAATGGCTCGACACGTTCCAGACCCTGGCACGACTTTGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGTTACAATTTGGAGAGCCCAATCAGCTCGTCACAGCGTCGGGAGGACGATCGCATCACCTACATCAATAAGGGTCAATTCTATGGCATAACGCTTGAATATGTTCACGATGCGGATAAGCCaatcaaaaatacaacagTTAAGaGTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGTCCCGAGGATGAGATAAAAGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGataCAAAGAACTCGGTGGGACTTGTTGGTTGCATTGAGGAAGTCTCACATAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCCGCCAAGATCAACATTGCGGTTCAGTGTTTAAGCACGGATTTCAGCAGTCAAAAGGGAGTTAAGGGTCTGCCGTTGCACGTACAAATCGATACGTTTGAGGATCCAAGGGATGTGACAGTCTTTCATCGTGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGTAAGACGCGAGATGAGGAACGTCGTGCCGCAAAGCGTAAGATGACACCAACTGGACGCAAGAAGCTGGATGATCTGTATCATCCGGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTGCTCTTCTCGCCCGCTGAGGATATGGAAAAGAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTCAAAGGTGCCTCACCATTCTTGCTGCACGGTCAGAAGGTGGCCACGCCCACGCTCAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAAAAGGATCATATATTGGAACAGAGTATGTTAACCAGCACGCCCATGTCCGACTTTGGGCCACCAATGAAACGTGGCCGCATGACACCGCCAACAACGGAACGTGTCATGTTGTATGTGCGGCAGGAGAACGAAGAGGTCTATACGCCGCTGCATGTGGTACCTCCCACCACCATTGGCCTGCTAAATGCGattgaaaacaaatacaaaatctcAACAACGagcataaataacatttatcgCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGACATTTTCTTACTGGAAGTGCAACAGATCGAGGATGATCTGTATGATGTGACGCTCACGGAGCTGCCCAATCAATAG
- Protein Sequence
- MMQDATSSYAISYTDWITESRRYSLDQQQQTPPPTHLQHQQQQQQHPELHHLASHHHQHHQQQHHHYGSQSPPHYTYEPQKDATQLVQQQQHLPLTAAGLMQSVAAEIQLSEQQATPPPPAPHPPLAHASNANYAVYNYYRSDVDVEVDDVDVDHQQQQQQQQQEQPQQDQLLWSNANSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQQQHQQQQHQQQQQQQQQQQQPTHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGGGSVITQKIYRVDAASTEVEATATATAFELNVKRAATSPARATPELEMYATTGGTQIYLQTSHQNSNGPSTQQSSLQAQSPSPGPYITTDSYGMYAASRLPPGPPPATTFIAEPYYREYFASDGQGGYVPAGTARSLYGEDVSVTASAQPQPVGGVYEARFTSNGPTTTTVLTSSNSHQHHNQQQQQQQQQQQQEQSGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGSLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDVTVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTPTGRKKLDDLYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILEQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476386;
- 90% Identity
- -
- 80% Identity
- -