Scal000261.1
Basic Information
- Insect
- Scaptomyza caliginosa
- Gene Symbol
- gt
- Assembly
- GCA_035044725.1
- Location
- JAWNNR010000008.1:246122-247639[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9 6e+03 -2.8 1.2 33 47 76 90 72 108 0.50 2 2 2.1e-12 1.8e-09 37.3 5.6 5 61 415 471 411 473 0.93
Sequence Information
- Coding Sequence
- atgttgaTGCACGAGAAACTTATCAGCGGGCAGTTCTTTGATTTAAAGACTGATCGCAAGCCATTTCTGCATcaccatcatcaacatcaacatcatcagcagcaacagcaacagcagcagcaatatcagttgccacagcagcaacatcatttacatcagcagcaacaacagcaacatttaacATTGCCCAAAATGGATTTGTATGCTGCCTATGCctatcagcaacagttgctatCGCTtacccagcaacaacagcaacagcagcagcaatccgttgctgctgccgctgaggTTCTGGACTTGTCGCGTCGCTGCGACAGCGTAGAGACGCCACGAAAGACACCATCACCGTATCAGACCAATTATAGCTATGGCAGCGGCTCACCCGCCGCCTCGCCCACAGCAACCATACCCAGCAATCTGCTCTATTctgcacaagcagcagcagctgcccagaaacaacaacagcagcagcagcaacaacaacaactggcaactcTTTATCCTGCGCTCTACTACGGTGCCAACATAAAACAGGAACAAacagtgccagcagcagcaatcaagacgaacaacaacagcaacagcaacaccaacaatactGCTAGCTTGCTGCAATCGTTTGCcgctgcatcagcagcagctgttgctgccgcagcaATCTCATCACGACCCGCCAGCAATGCCAGCACCATGCAAATTGATGTGCTAGAAGCCCCACAatcgccaccaccaccaccaacaacaacaacagcagcagcagcgacaacagcaaacggcaattGCCACAACACCACGCCGACCAGCAGCACAGCAGGCAGCGCACAGCACTCCGCAGCGGATGCCCTGAAGCAAACGCGTCCATTCAAAGCCTTTCCACGTGATCCGCTTGTGATTGCAGCCAACTTCGCTGCCACCGATGTCCTGCTCGATAATCCGCGTGTTGAACGCTATACAGAGTATCGCAAGCGAGTGCTTGAGCAAATTCGCAGCTCAAACGGTGGCTCGCGCACCGTAACGAATCCCAAAATGCGACGCACTAACTCCAGAAGTGGCAGCGTCAACGAGGGCAGCTCCTCGACAAACAACAGCGAGAGTGAGGATCGCGCCGATCGTGCCGAGGAGTCCAGCGATTGTGATTCGCATGCGGGCAACTTTGCAGACAACAAACTGATGGGCACAACAGCTGGCGGAGCTAATGGCTCGAGCGCTGGCAATGCTGGCCAAGTCAAGGATGCTGCGTACTATGAGAGGCGGCGTAAGAATAATGCTGCGGCCAAGAAATCACGCGATCGTCGTCGCATCAAGGAGGATGAGATCGCCATAAGGGCTGCGTATCTGGAGCGTCAGAATATTGAGTTGTTGTGCCAGATTGATGCGCTTAAGGCGCAGTTGGCTGCATTTACGGCCAAGGTAGCTGTTTAG
- Protein Sequence
- MLMHEKLISGQFFDLKTDRKPFLHHHHQHQHHQQQQQQQQQYQLPQQQHHLHQQQQQQHLTLPKMDLYAAYAYQQQLLSLTQQQQQQQQQSVAAAAEVLDLSRRCDSVETPRKTPSPYQTNYSYGSGSPAASPTATIPSNLLYSAQAAAAAQKQQQQQQQQQQLATLYPALYYGANIKQEQTVPAAAIKTNNNSNSNTNNTASLLQSFAAASAAAVAAAAISSRPASNASTMQIDVLEAPQSPPPPPTTTTAAAATTANGNCHNTTPTSSTAGSAQHSAADALKQTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSSTNNSESEDRADRAEESSDCDSHAGNFADNKLMGTTAGGANGSSAGNAGQVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKAQLAAFTAKVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00494864;
- 90% Identity
- -
- 80% Identity
- -