Sleb011825.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptodrosophila lebanonensis
Gene Symbol
nfxl1
Assembly
GCA_003285725.2
Location
NW:9131033-9134660[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.54 3.6e+03 -2.3 0.6 15 18 95 98 94 99 0.81
2 21 2 1.3e+04 -8.1 6.4 15 19 151 155 150 155 0.82
3 21 0.13 8.5e+02 -0.3 0.4 4 10 186 192 185 192 0.95
4 21 6.5e-08 0.00043 19.8 15.5 1 18 200 216 200 217 0.98
5 21 0.69 4.6e+03 -2.6 1.9 6 10 243 247 242 247 0.90
6 21 2.3e-07 0.0015 18.1 14.9 1 19 253 272 253 272 0.97
7 21 0.44 2.9e+03 -2.0 1.5 5 10 296 301 296 301 0.94
8 21 3.1e-08 0.0002 20.9 8.7 1 19 307 325 307 325 0.99
9 21 0.88 5.9e+03 -3.0 0.5 1 7 350 355 349 357 0.49
10 21 9.1e-08 0.0006 19.4 10.4 1 18 360 377 360 378 0.96
11 21 0.19 1.3e+03 -0.9 0.7 1 5 387 391 387 396 0.75
12 21 2 1.3e+04 -5.0 2.3 5 10 401 406 401 406 0.91
13 21 0.0011 7.4 6.3 17.1 1 18 412 429 412 430 0.97
14 21 3.3e-08 0.00022 20.7 14.7 1 19 439 457 433 457 0.90
15 21 0.0011 7.3 6.3 11.6 9 18 502 511 493 512 0.90
16 21 0.011 71 3.1 5.6 1 11 524 533 524 534 0.95
17 21 0.86 5.7e+03 -2.9 1.4 6 10 585 589 584 589 0.88
18 21 3.9e-06 0.026 14.1 5.5 1 11 595 605 595 606 0.96
19 21 0.0013 8.3 6.1 14.3 3 18 635 650 634 651 0.94
20 21 1.7 1.1e+04 -3.9 1.6 8 13 656 661 655 661 0.74
21 21 5.7e-06 0.038 13.6 12.2 1 16 702 716 702 722 0.92

Sequence Information

Coding Sequence
atgaaaaagataGCTCAAATTCAGGCCAAAAATGCGGCGGCTCAAAAGCTTGTTGAAAACTATGCCTCCAGTTCTGAAGATGAAGGCGAGCTGGATGAAACACGCATACTGGATTTGCTTTATGAGCACTATCAGCCGCCATCGGAACGCAGCTCAGCCAACAGTAGCAATGGCCATAGCATGGGACGCACAGCAACGTTCCTTCAAAATGCGTTGCATTCTGGAGCGGCTACCTGTTTGATTTGCATCGGTAGCATACGACGCGTTGAGGCGATATGGTCGTGTCAGAGCTGTTACTGTTTCTTTCACTTGAACTGCATTCAGCGTTGGGCTAATGATAGTCTGATGCAGATGAAAACCAAGGTGGAACAGCAAAATGGCGAGCAAGGTTACTATAATTTTATGGGTGAATATGTGCCACCAAAGCGGCATAAACAGCTACACTGGTGCTGCCCCCAGTGCCGCAAGGAGTACTTACCAGGCGAACGACCAAAGCAATACGAATGTTTTTGTGGGAAGGAGTTGGACCCGAAACCAGAGCCATTTCTTGTTCCACACTCTTGTGGAGAAATTTGTAGCAAACTCTTACAGCCAAAATGTGGACACGACTGCAAGTTGCTCTGCCATCCTGGTCCATGTCCACCCTGCGCTCAATTGGCTCACAGCTCCTGCCTTTGTGGCAAGTCAGCCCCTCGCTCGATGCGCTGCATTGATAAGCACTGGCAATGCCAGCAAATTtGTAATGAATTACTGAAATGTGGAAAGCATTTATGCAATCAAATATGTCATAGACCAGGCCAGTGTCCGCCGTGTACGAATAAGAGTAAGCAGCCCTGCGAGTGCAATCGAGAGGTGAAGACGGTAAACTGCTCGGAGCTTAAATGGAAATGTAAAAGAgtTTGTGGGGCTGCCTATTCTTGTGGTCTGCATTTTTGCGAACGAGTTTGTCACTATGGAAGTTGTGGGGATTGTCCCTTGGGTTTGCCTCGCACGTGTCCCTGCGGCAAGAGCAGCAAAGTTGGTCCTTGCAGTCTAGCGATTGACACTTGTGGCGACACCTGTCAGAAACTCCTCCCCTGCGGACTCCACACATGCACCCAGCGCTGTCATCGGGGATCTTGTAATTTGTGTTTAGTTATCACCAAAAAACGATGCAGGTGCGGGCAGCACGAAAAAGAGCTTCCCTGTTCCAAGGAATTTACATGCGAGACCAAGTGCAAGCGCATGCGTGACTGTGGGAAGCATGTGTGCAATCGAAAGTGCTGTGGAGATCAGTGTCCACCATGTGAAAAGATCTGTGGCAAACAGTTGAGttgcaacaaacacaaatgtcAGTCCGTCTGCCACAATGGTCCTTGCTATCCATGCAAACTGGAGTCCCAGGTAAATTGTCGTTGCGGTAAGACGAGAAAAAGCGTACCCTGTGGGCGGGAGCGTAATGCTAGGATTATTTGTCTGGAGCTCTGTCGTATCACGTCTAAATGTCATCATAGCGTTAAACATCGTTGCCACAAGGGAGAGTGCCCGCCTTGTGGACAACCATGCAATCTGCCAAATGATATCAGCGGTTGTGGACACATTTGCAAGGCACGTTGTCACGCAGCAATACGAGTTCCTATATCATCAGCAAGCGCAAAAAAGTATGAGTATAAAGCACAGCCTCATCCGCGTTGTGAGCAAAGCGTCAACGTCACATGTATTGGAGGCCACGAAGTAGCTATGTGGCCATGCTGGAACTCCAAGCCTTCATCCTGTCAGCGTAAATGTGCTCGGAAATTGAAGTGTGGCAATCATAAATGCAATCTTGTCTGCCATGCCGTGCCCAATCTTCAGGATATGAATGAGCAATCCGGGTGCGCTAAATGCGAGGAGGGCTGTGCAGTCCCACGACCTTCGGGTTGCATACATGCTTGTCCAAGATCTTGTCATCCACCACCATGCATGCCTTGCAATGTAATTATCAAAAGTAAATGCCATTGCGGTCTGAATCAGGTTGTCTACAAGTGCAATGAGTTCTTCGACGAAAAGAGCACCATACAGGAAATTGTTGAACGGCAGCAGAAATTTCGGAGTTGCGGTAATCGCTgcttgaaaaatTTTGCTTGCGGCCATCGATGCATGACAACTTGCCACCCTGGAAAATGCCCAAATCCGGAGCTGTGTCGCAAGAAAGTCCGCATTTATTGTAAATGCAAAAGAATCAAGTTGGAAATCTCTTGTGATAAAAATCGAGCTGGTCAAGTGTCCTTGGATTGTGATGCCTATTGCGCTGCAGAACGGCAAAGAGTCGAGGCTGCCGAACGACAGGAAATTGAGCAGAAATTGCTCGAAGAGGACAGAAAGAGGCGCATAGAGCTTGAGAAATTCGAGCAGAAATTTGGCAAGCGTAAACAAAGAGAACGTAAACTAATCGAAACCGAACCAGCCAAACCTCTGATTAATTGGCATCGCCTGGCAATCTATGGGCTGGCCCTGCTCGCGGTCTTGGCCGCCATAGGCATAGGTTTTTATGCGGACAGTTAA
Protein Sequence
MKKIAQIQAKNAAAQKLVENYASSSEDEGELDETRILDLLYEHYQPPSERSSANSSNGHSMGRTATFLQNALHSGAATCLICIGSIRRVEAIWSCQSCYCFFHLNCIQRWANDSLMQMKTKVEQQNGEQGYYNFMGEYVPPKRHKQLHWCCPQCRKEYLPGERPKQYECFCGKELDPKPEPFLVPHSCGEICSKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSAPRSMRCIDKHWQCQQICNELLKCGKHLCNQICHRPGQCPPCTNKSKQPCECNREVKTVNCSELKWKCKRVCGAAYSCGLHFCERVCHYGSCGDCPLGLPRTCPCGKSSKVGPCSLAIDTCGDTCQKLLPCGLHTCTQRCHRGSCNLCLVITKKRCRCGQHEKELPCSKEFTCETKCKRMRDCGKHVCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRKSVPCGRERNARIICLELCRITSKCHHSVKHRCHKGECPPCGQPCNLPNDISGCGHICKARCHAAIRVPISSASAKKYEYKAQPHPRCEQSVNVTCIGGHEVAMWPCWNSKPSSCQRKCARKLKCGNHKCNLVCHAVPNLQDMNEQSGCAKCEEGCAVPRPSGCIHACPRSCHPPPCMPCNVIIKSKCHCGLNQVVYKCNEFFDEKSTIQEIVERQQKFRSCGNRCLKNFACGHRCMTTCHPGKCPNPELCRKKVRIYCKCKRIKLEISCDKNRAGQVSLDCDAYCAAERQRVEAAERQEIEQKLLEEDRKRRIELEKFEQKFGKRKQRERKLIETEPAKPLINWHRLAIYGLALLAVLAAIGIGFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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