Basic Information

Insect: Scaptodrosophila lebanonensis
Gene Symbol: stc
Assembly: GCA_003285725.2
Location: NW:2912588-2918100[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 1.3e+04 -4.2 1.6 15 19 474 478 473 478 0.81

2 16 0.086 5.7e+02 0.3 2.3 4 11 507 514 506 515 0.91

3 16 1e-06 0.0068 16.0 14.5 4 19 521 536 519 536 0.91

4 16 1e-06 0.0069 16.0 12.8 1 18 572 589 566 590 0.85

5 16 1.8 1.2e+04 -4.0 2.7 7 13 594 600 591 601 0.77

6 16 1.6 1.1e+04 -3.8 0.9 6 10 620 624 619 624 0.83

7 16 2.1e-09 1.4e-05 24.6 13.7 1 19 630 648 630 648 0.98

8 16 1.2 8.1e+03 -3.4 0.5 5 10 678 683 678 683 0.90

9 16 3.1e-05 0.21 11.2 15.7 4 18 696 710 689 711 0.86

10 16 0.067 4.5e+02 0.6 13.2 1 11 751 761 751 773 0.79

11 16 5.2e-10 3.4e-06 26.5 15.5 1 18 778 795 778 796 0.97

12 16 0.98 6.5e+03 -3.1 0.6 6 10 825 829 824 830 0.78

13 16 2 1.3e+04 -7.4 9.5 10 18 843 852 832 853 0.76

14 16 4.6e-09 3.1e-05 23.5 12.9 1 17 889 905 889 905 0.99

15 16 4.1e-07 0.0027 17.3 14.3 1 19 922 941 922 941 0.96

16 16 1.3 8.7e+03 -3.5 0.1 8 12 957 961 956 961 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	1.3e+04	-4.2	1.6	15	19	474	478	473	478	0.81
2	16	0.086	5.7e+02	0.3	2.3	4	11	507	514	506	515	0.91
3	16	1e-06	0.0068	16.0	14.5	4	19	521	536	519	536	0.91
4	16	1e-06	0.0069	16.0	12.8	1	18	572	589	566	590	0.85
5	16	1.8	1.2e+04	-4.0	2.7	7	13	594	600	591	601	0.77
6	16	1.6	1.1e+04	-3.8	0.9	6	10	620	624	619	624	0.83
7	16	2.1e-09	1.4e-05	24.6	13.7	1	19	630	648	630	648	0.98
8	16	1.2	8.1e+03	-3.4	0.5	5	10	678	683	678	683	0.90
9	16	3.1e-05	0.21	11.2	15.7	4	18	696	710	689	711	0.86
10	16	0.067	4.5e+02	0.6	13.2	1	11	751	761	751	773	0.79
11	16	5.2e-10	3.4e-06	26.5	15.5	1	18	778	795	778	796	0.97
12	16	0.98	6.5e+03	-3.1	0.6	6	10	825	829	824	830	0.78
13	16	2	1.3e+04	-7.4	9.5	10	18	843	852	832	853	0.76
14	16	4.6e-09	3.1e-05	23.5	12.9	1	17	889	905	889	905	0.99
15	16	4.1e-07	0.0027	17.3	14.3	1	19	922	941	922	941	0.96
16	16	1.3	8.7e+03	-3.5	0.1	8	12	957	961	956	961	0.76

Sequence Information

Coding Sequence: ATGGCCGATTATTGGCCGCAGTGGACAAATGGTTCTGCAGCTGCCTCAGCAGCTGAATCATACGacgcagcagaagcagcagcaacaacaacaacaacaaccacaaatgCAACAGCAAATGCGGTTGGcagtcacaacaacaacaacaactatgtgAACTTCAATCAGTTCATCATGCAGCATAATTTGGGAGGTAATGGTGGCGGAGGGGGAAACGGTGGTGTAGGAAGCGGCAGTGGAAATGGCTCCTCATCGGCAGCTGGAACTGCAAACGCTTTAACAAACATAATGCAACATCCTCTGGGCAGCAGCGGGAGCAacgccagcaacaactacagcgttggcggcggtggcggagCGTTTGGCCTGACGCCCAGCACAGTACAATCGATGGCGACATCCAGCGGTTTTGAAAATttCTATGCCAGCTTTCCGCCGCAGTTATTTACGCCTTATCAGAATGGCGATCTTGGCAATTCAAACTACAATAATGGCGCTGCAACATATTCCGATTTGTATACACCGTTTGGTCACAATCCCTTTGCCGCCGGCTTTGAGTTAAGCGCTTCCAAGCTGCAACCAAATGCTCCAGAATTTGTGCCTAACTTTGCTAAACTGAGTCTGGAGACGCCGGCAACATCCACAGCAATTACACGCAACAGTTTGGTCAACGGCaacagtaataacaacaacagcatcaacaacaacaacagcaacactgcCGGTAGTCAAGAGACGGCCAATGTAAATGTTATCGAAACTGCCAATAATGCCAATCAGTtaccacagcagcaacaacaacagcaacaacaacagcaacatcatcatcaacaacaacgtgCGGGCGCTACAAGCAAGTTGCAATATCGCGACGCCCACAATTATACCCCCACCGATAGGGAAAGGGATAGGGACAGGGAGAGGGAAAGGGAGCGGGATCGTGACCGAGAGCGCGACTCGAAACCCGGCGGTAGCCGTCAGCGTCGTGCCTTTGTCGACTACCGTGAGGAGCGTGACGAGCGATACGAGCGGAAGAAACCGCAGAAGCAACAGCGTTACGATAATCATCGCAGCAATAAGCGGCGCGATGACTGGAATCGCAATCGCGATCGCATTAACGGCTATCGCGTGGACGAGCTGCTGGACACCAGCAACGAGAGTCCCCTCAACTCGCCAGAGAAGCAGCgcgaccagcaacaacagcaactgtcGCCGAAACGTCAGGCGGACAATGAGAAACTGTCGCAGCGTGAGAAGCTCGTGCGTGACATCGAACAGCGTCGTCTGGAGTGTCTCGTCTGTGTGGAGCCGATCAAGGCGCACCATGCCGTGTGGTCCTGTCAGAATTGCTACCACGTGCTCCATCTGAAGTGCACAACGACCTGGGCGTCCAGCTCGAAGGCGGAGAACGGTTGGCGTTGTCCCGCCTGCCAGAATGTCCTGCAGGATGTGCCACGCGAATATTATTGCTTCTGCGGCAAGCTGAAGAATCCACCGTTGACACGCACCGAGCTGCCACATTCCTGTGGGGAGCTCTGCTGTCGCATTGAAGGCTGTGCTCATGCCTGCACCTTGCTGTGTCATCCGGGTCCCTGTCCGCCCTGCCAGGCAAACGTGCAACgcagctgcggctgcggcAAGACCTCCAAGACGATGCAGTGCGCCATGAAGGAGGAGATCGCCTGCGGCGAGGAGTGCGGCAAGCTGCTGAACTGCGAGCAGCACACCTGCAAGGAGAAATGCCATGCCGGCAAGTGCGCCAGCTGCGAGCATAAGCTGGAGCAGCGCTGCCACTGCGGCAAGCAGCAGCGTGAGGTGCTGTGCACGCGAGAGACGCACGACCGTCGCCACTATTCGTGCAGCAAGCCCTGCGGCAAGGATCTGGCCTGCGGCAATCACAAATGCAAGGACTCTTGCCATGCCGGCAACTGCCGCCCCTGCAAGCTGAGTCCCGAGCAGGTCAGCAGCTGTCCCTGCGGCAAGGTGGAGGTGCCACCAAAACAGCGCACCTCCTGCCTCGATGCCGTGCCCACCTGCGAGGGCGTGTGCGGCAAAACACTGCGCTGCGGCAAGCCCGCGCATCCCCACCAATGCGCCAGCAAATGCCATCTGGGACAGTGCCCGCCCTGCAACAAGCAGACAGCGGTGCGCTGCCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGCTGTCCACGCGCGCCGACGACGCGCGCTGCAAGAAGCGCTGCACAAAGAAGCGCTCGTGCGGGAAACACAAATGCAATCAGGAGTGTTGCATCGACATCGACCACGCCTGCCCGCTGCCTTGCAATCGCACCCTTAGCTGTGGCAAGCACAAATGCGACCAGCCCTGTCATCGTGGCAACTGCCCGCCCTGCTACCGCTCCTCCTTCGATGAGCTGTACTGTGAGTGTGGCGCCGAGGTCATTTATCCGCCTGTGCCGTGTGGCACGAAGAAACCGGCCTGCAAGCGGCCCTGCTCTCGCTCGCATCCATGCGAGCATGCCCCACAGCACAATTGCCATGCGGCTGCCACATGTCCGCCCTGCATGATGTTCACAACCAAGTGGTGCCACGGACAGCATGAACAGCGCAAAACCATTCCCTGTTCGCAGGCCAACTTCAGCTGCGGCCTGGCCTGTGGAAAGGCCTTGCCCTGCGGCAGGCACAAGTGCATCAAGCCCTGCCACGAGGGTCCCTGCCAGCCGGCAGCGGGAGAAATCTGCCGCCAGAGTTGCACCACAGTGCGTTCCCATTGTGGCCACAAGTGTGCGGCGCCCTGTCACGATGGTGCCTGTCCGGAAACGCCCTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGTGGCAATCGCAAGCAGAATCGCAGCTGCCACGAGCTGGCCCGAGAGTACAGTCGCATCGCCACCGCACAGCTGGCCTCGTCCATGGCCGAAATGTCGCGTGGAAACTACATGGAGCTGAGCGAAATACTAGCGCCGGTCAAAATTAACAAGACCAATAGAACTCTCGATTGTAGCGATGAATGCCGCGTGCTGGAGCGCAATCGACGCCTTGCCATTGGGCTGCAAATTCGCAATCCGGACGTACAACAGAAGCTGCTGACCAAGTATTCGGATTTCGTGCGCAGTTTTGCCAAACGTAACCCGGTGCTGGTCAAGTCCGTATATGAGACGCTCACCGATCTGGTTAAATTGGCTAAGGAGAGCAAACAAAAGTCGCGCTCCCACTCCTTCCCGACAATGAATCGGGAGAAGCGGCAATTGGTGCACGAGCTCTGCGAAATGTTTGGCATCGAATCCGTTTCGTATGACAAGGAGCCTAATCGCAATGTGGTGGCAACTGCCTTTAAGGATCGCTCCTGGATGCCCGCCACCAGCATCATGGAGGTTTTGGCTCGTGAGTCTGGACAGCGACGTGTTCCTGTGCCTAGCAACAATGCTTGGAGCTTGAAGAAGTAA
Protein Sequence: MADYWPQWTNGSAAASAAESYDAAEAAATTTTTTTNATANAVGSHNNNNNYVNFNQFIMQHNLGGNGGGGGNGGVGSGSGNGSSSAAGTANALTNIMQHPLGSSGSNASNNYSVGGGGGAFGLTPSTVQSMATSSGFENFYASFPPQLFTPYQNGDLGNSNYNNGAATYSDLYTPFGHNPFAAGFELSASKLQPNAPEFVPNFAKLSLETPATSTAITRNSLVNGNSNNNNSINNNNSNTAGSQETANVNVIETANNANQLPQQQQQQQQQQQHHHQQQRAGATSKLQYRDAHNYTPTDRERDRDRERERERDRDRERDSKPGGSRQRRAFVDYREERDERYERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYRVDELLDTSNESPLNSPEKQRDQQQQQLSPKRQADNEKLSQREKLVRDIEQRRLECLVCVEPIKAHHAVWSCQNCYHVLHLKCTTTWASSSKAENGWRCPACQNVLQDVPREYYCFCGKLKNPPLTRTELPHSCGELCCRIEGCAHACTLLCHPGPCPPCQANVQRSCGCGKTSKTMQCAMKEEIACGEECGKLLNCEQHTCKEKCHAGKCASCEHKLEQRCHCGKQQREVLCTRETHDRRHYSCSKPCGKDLACGNHKCKDSCHAGNCRPCKLSPEQVSSCPCGKVEVPPKQRTSCLDAVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCNKQTAVRCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFDELYCECGAEVIYPPVPCGTKKPACKRPCSRSHPCEHAPQHNCHAAATCPPCMMFTTKWCHGQHEQRKTIPCSQANFSCGLACGKALPCGRHKCIKPCHEGPCQPAAGEICRQSCTTVRSHCGHKCAAPCHDGACPETPCKELVEVQCECGNRKQNRSCHELAREYSRIATAQLASSMAEMSRGNYMELSEILAPVKINKTNRTLDCSDECRVLERNRRLAIGLQIRNPDVQQKLLTKYSDFVRSFAKRNPVLVKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEMFGIESVSYDKEPNRNVVATAFKDRSWMPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -