Sleb012488.1
Basic Information
- Gene Symbol
- ZMIZ1
- Assembly
- GCA_003285725.2
- Location
- NW:1980722-1987815[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.24 1.6e+03 -1.5 0.8 3 24 676 697 674 702 0.87 2 2 8.9e-26 5.9e-22 76.8 1.9 1 49 761 809 761 810 0.98
Sequence Information
- Coding Sequence
- ATGGATGCTGTGCTGCAGGAAACTGCTGAGGCCATGGAGCATTTGGAGGATTTGGAGTCAATGAACTATACTTTGACGAATCGTAACTCATGCTATTGtcttttttatgattattgcAGAAAAAATGATGAAATGAACCAGCAGGCGGGCTCCTCAAGGGCGCCAGCCACAGGGGGCCAAATCTCACCACCAGGTGGCGTAACAGCAAATTTGGatgcgcagcaacaacaacaacagcagcagcagtactacaaccaacagcagcagcagcaactataccaacaacagcagcagctacaacaacgcGAAAGTTTTTTGGCctaccagcagcagcaacaacaacagcaacagcagcagcagagacaAATCGGTGGCAACAGCGGTGCCAACTTTATGCTCGGCAATGAGCTCGTCGGCAGCGACAGTCTGCGCAGTCTGAACAACACATTCGGACCCAATTCAGAATTCACAGCCCTCAACAATACGAGCAGCAACAGCTCTCTGGGCAACCTGAGCACGGCCAGCGGTCAGAGCGCGGCGAGTGCAGGCAGTGGTGCCGGAGGCTATACCAATAATATGGTGGCAGCCACcgcacagcagcaacaggtgcaacagcaacagcagcaacaacaacaccaacagcagcagcaacagattAACAACATGGACGCCATGGGCGGCTATAGTCAGATGGGCGGAGGAGGCATGCATCCAGGCGCTAATAGCGGCATGATGAACACTTTAAATGGCGGCGCACAGTATATGAATGGCGGCCAAGGAGCCTATAATGGCAATGCTGGCATGGGCATGGCCGGCATGGGTTATGGCAATGGCGGTGGACCAACGCGGCATCATCAAATGACGCCAATGAACCAAATGCAAAACATGTCCATGGGCGGACCATGTCCCGGCAACGGCATGCCCATGGGCGGGATGGCCCAACAGCAGATGGGCGGCGGTGCTGGCGGCATGAATCCAATGGCCAAGATGCAAGGCATGGCCAATGGGGGCTatccgcagcagcagcaacagcagcgtcGCATGGCGCCCTACCCGCATCCACAGATGCATTTGGCACAGAAGCGTGCCGGTGGaggcggcggtggtggcgcTGTCGGCATGTACCCGAGCCCGGCGCAGAGTatgccacagcagcagcaagtaCCACACGGTGGACAGCCCTATGGTGGCCAGCAGATGCATCCGGGCGCAGGCGGTGGCGTGCCGCTGCCAATGCAGGCGGGCGCAGGCAATGGCTATGGACGGGCCGGACCCATGGGCGCCGCTGGCTACGGACGCAATGGTGGTGCCGGTATGGGACCGGGCGTAATGGGTGCTGGACCTGTTATGGGTCCCGGTGTTCCAATGGGTCCCATGGGCGCTGGTCCGGGCATGGGACCCGGCTGCATGAGTCAGCGTTTCATGCCGCAGGCGGGAGCCGCTGGTGCCGCCGGCTACGGAAGTGGTCCGAATGCGCACGGAGCGCAGTTCTATCCTGGCGGCAACGGTGGTATGGGCGGCGTTGCTGGCATGGGCGTGGGCGGTGGTCAAGGCAGCATGTGTCCGGCTGGTCCGGGCGGTGTGCCAAGCACTGGCAATCCGTACCAGAATCAAGGTTTCCAGCAAAACTATCAGCACAGTCCAGTTCCTGGTAATCCGACGCCACCACTAACACCCGCGTGCAGCGTTCCCTACGTCAGCCCCAATCCAGACATCAAGCCGCCTATGGACAACAGCGAAGAAATGAGACTGACATTCCCAGTGCGCGATGGCATCATCCTGCCGCCCTTCCGCCTGTTGCACAATCTCTCTGTCAGTAATCATGTGTTCCACTTGAAGCAGAATGTCTACAACACTCTCATGTGTCGCACCGACCTCGAGCTGCAGCTGAAATGCTTCCACCAAGACGATCGGCAGATGAACACAAATTGGCCGCACACCGTCACCGTCTCCGCAAATGCCACGCCGCTCAACATTGAGCGCTCCGAGAAGAACAGCACCGCCCTGCGACCGCTCTATTTGAAGTCGGTCTGCCAGCCTGGACGCAACACGCTCCAGCTGACCGCCAGTTCCTGTTGTTGTTCCCATCTATTTGTGCTGCAACTAGTCCATCGGCCATCGGTGCGTCAGGTGCTGCAGTCGTTGCACAAACGCAATCTGCTGCCATTGGAGCACAGTGTGCAGAAGATAAAGCGAAATTTGAGTTTGCCAAGTGGCGGTGATGTGCCGAACGGAGCTGCCAATGGTGGCAGCACAGACCCCACGCAGCAGTGCGCAAAGATCTCATTAAAGTGTCCCATCACCAAATCTCGAATACGTCTGCCGGCACGCGGTCACGAGTGTAAGCATGTCCAATGCTTCGATCTGGAGGCTTATCTGATGATCAACAGCGAGCGCGGCTCCTGGCGCTGTCCCGAATGCAGCAAATCCGCCATTACCGACACGCTGGAGATCGACCAATATATCTGGGCCATCCTCAACACGCTCAGCAACTCCGATGTGGACGAGGTAATCATCGATTCTTCAGCCAATTGGCGCGCGTTACAGCACAACGGTGGCATGCCAAATCCGCCCCAGGTGGGCAGCAATGGCGGACAATCGAATCCaggcaacagcaatggcaacaacaacggcagcaataCCAgcattaacagcaacaacgtcaTGCCCAGCATCAAGCAGGAGCTGTGCGACGACATTGCCAAAGTGATGTCGCCGGGCTCCACACAACTACCCACATGGGACAACTCGCAGGCGATGAGTCCGTATACTATGCACGACATGAATTCCATTGCCAGTGGCAATATGATGGGCAACGGTGCTGTCCCCAACGCTGGCAATCCCGTCGGCAATGGCGTCTTACCAGGCACGCAAGTTGGCAATCGCAATAGCTATGATGGCTTCAGTGGCGGCAATCACAATGAGGGTGGCATGCCCAATAGCGATGGCGTCAACTCGCTGGATCAGTTAAATGCCATGGAAAAGTCGCTCAGCGATCAGATGCCCCACACGCCGCACACTCCAGGCGCAGTCAGCCATCCGATGACGCCCGGTGGACCGCCCAGTGTGAGTTCAGCGCACAATGAACCCATCGCCGGCGGAACACCCAAtgccagcaacaataacaacaacagcagcagcaccggCCACAACTCGCCCCAAACGCCGGGAACACCGAGTCGTTTGGGTGGTGGTGGCTTATCCAACGCCAACGACAGTCAGGCACAGCAGTCGCAACAATCGCAACAAGAACAGCTCCTCAACTCGCTGATGAACAGTCAGACGCAACTGAAGTTTCCGGAAAGCGATATTAGCgccgagctgcaaaatttcgATGCTACCAGCATCAATGACACGGCGCACGATCTGAACCTGCTGCAGGATGTCGATCCCATGGAGATTCTGTCGTATCTGGATCCGCAGCCAGATCTGAATACGCCACCCTCGAGCGgctccagcaacaacaatgctagCGACGACTTGCTCGCCACACTTTTCGACTAA
- Protein Sequence
- MDAVLQETAEAMEHLEDLESMNYTLTNRNSCYCLFYDYCRKNDEMNQQAGSSRAPATGGQISPPGGVTANLDAQQQQQQQQQYYNQQQQQQLYQQQQQLQQRESFLAYQQQQQQQQQQQQRQIGGNSGANFMLGNELVGSDSLRSLNNTFGPNSEFTALNNTSSNSSLGNLSTASGQSAASAGSGAGGYTNNMVAATAQQQQVQQQQQQQQHQQQQQQINNMDAMGGYSQMGGGGMHPGANSGMMNTLNGGAQYMNGGQGAYNGNAGMGMAGMGYGNGGGPTRHHQMTPMNQMQNMSMGGPCPGNGMPMGGMAQQQMGGGAGGMNPMAKMQGMANGGYPQQQQQQRRMAPYPHPQMHLAQKRAGGGGGGGAVGMYPSPAQSMPQQQQVPHGGQPYGGQQMHPGAGGGVPLPMQAGAGNGYGRAGPMGAAGYGRNGGAGMGPGVMGAGPVMGPGVPMGPMGAGPGMGPGCMSQRFMPQAGAAGAAGYGSGPNAHGAQFYPGGNGGMGGVAGMGVGGGQGSMCPAGPGGVPSTGNPYQNQGFQQNYQHSPVPGNPTPPLTPACSVPYVSPNPDIKPPMDNSEEMRLTFPVRDGIILPPFRLLHNLSVSNHVFHLKQNVYNTLMCRTDLELQLKCFHQDDRQMNTNWPHTVTVSANATPLNIERSEKNSTALRPLYLKSVCQPGRNTLQLTASSCCCSHLFVLQLVHRPSVRQVLQSLHKRNLLPLEHSVQKIKRNLSLPSGGDVPNGAANGGSTDPTQQCAKISLKCPITKSRIRLPARGHECKHVQCFDLEAYLMINSERGSWRCPECSKSAITDTLEIDQYIWAILNTLSNSDVDEVIIDSSANWRALQHNGGMPNPPQVGSNGGQSNPGNSNGNNNGSNTSINSNNVMPSIKQELCDDIAKVMSPGSTQLPTWDNSQAMSPYTMHDMNSIASGNMMGNGAVPNAGNPVGNGVLPGTQVGNRNSYDGFSGGNHNEGGMPNSDGVNSLDQLNAMEKSLSDQMPHTPHTPGAVSHPMTPGGPPSVSSAHNEPIAGGTPNASNNNNNSSSTGHNSPQTPGTPSRLGGGGLSNANDSQAQQSQQSQQEQLLNSLMNSQTQLKFPESDISAELQNFDATSINDTAHDLNLLQDVDPMEILSYLDPQPDLNTPPSSGSSNNNASDDLLATLFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -