Basic Information

Insect: Scaptodrosophila lebanonensis
Gene Symbol: -
Assembly: GCA_003285725.2
Location: NW:2341977-2402206[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8.4 5.2e+02 1.0 3.7 3 23 342 364 340 364 0.92

2 14 0.0025 0.16 12.1 1.0 2 23 556 578 555 578 0.93

3 14 0.014 0.9 9.7 0.2 1 23 595 618 595 618 0.97

4 14 0.14 8.9 6.6 0.9 1 22 623 644 623 647 0.90

5 14 0.0065 0.4 10.8 0.1 2 23 704 726 703 726 0.89

6 14 0.058 3.6 7.8 0.1 1 21 731 751 731 752 0.93

7 14 1.7 1.1e+02 3.2 2.3 3 23 783 803 782 803 0.92

8 14 0.00013 0.0079 16.2 1.9 2 23 815 835 814 835 0.97

9 14 2.5e-06 0.00015 21.6 2.6 1 23 841 864 841 864 0.98

10 14 2.3e-05 0.0014 18.5 0.8 1 23 884 906 884 906 0.98

11 14 0.4 25 5.2 2.6 1 23 913 937 913 937 0.97

12 14 0.078 4.9 7.4 4.3 1 23 942 966 942 966 0.96

13 14 3.9 2.4e+02 2.1 6.1 2 21 977 996 976 998 0.90

14 14 0.0033 0.2 11.7 4.3 1 22 1004 1025 1004 1029 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8.4	5.2e+02	1.0	3.7	3	23	342	364	340	364	0.92
2	14	0.0025	0.16	12.1	1.0	2	23	556	578	555	578	0.93
3	14	0.014	0.9	9.7	0.2	1	23	595	618	595	618	0.97
4	14	0.14	8.9	6.6	0.9	1	22	623	644	623	647	0.90
5	14	0.0065	0.4	10.8	0.1	2	23	704	726	703	726	0.89
6	14	0.058	3.6	7.8	0.1	1	21	731	751	731	752	0.93
7	14	1.7	1.1e+02	3.2	2.3	3	23	783	803	782	803	0.92
8	14	0.00013	0.0079	16.2	1.9	2	23	815	835	814	835	0.97
9	14	2.5e-06	0.00015	21.6	2.6	1	23	841	864	841	864	0.98
10	14	2.3e-05	0.0014	18.5	0.8	1	23	884	906	884	906	0.98
11	14	0.4	25	5.2	2.6	1	23	913	937	913	937	0.97
12	14	0.078	4.9	7.4	4.3	1	23	942	966	942	966	0.96
13	14	3.9	2.4e+02	2.1	6.1	2	21	977	996	976	998	0.90
14	14	0.0033	0.2	11.7	4.3	1	22	1004	1025	1004	1029	0.93

Sequence Information

Coding Sequence: ATGAATGTCGATGACTTGGACGACACGCATTTATGCATCAAATGCAATGCCACTATAGTGGGTCTGGAAAAATACATTGAGCACCGGAAGCAGAACTGCCTAGCAACTACGGGGCATGTGGGGGGCAGTGTGGGGCTGGCAAAGTCTGTGGCAAGGCCGATGCCGCTGCCGACAACTACAATCCAGGAGTCCAACTCTGTGACTGTGTCGCCCCCAATCATAAGTCGCTCAAGTCTAGATCATACCTACGATGGCTTTCATTTTACAGAGCCCGAGGCACCAAGCAGCTATTTGCGCAAAACTGCGGCCAGTCATGGTGGCAAGACCTCAAAATCCCTGACAGACGCCTACGATTTGACTTTGGGAGCCGATGTCTTCTTCTCATCACTACAACTGCAGAGCGTACAGGGAGGAAAGACAGGAAGCGCGCGACACGAGCGTCACAAATCCCGGAGTGCAGATCAGTCGGATGAGCAGCGGGATGAGCTTCCCTGGCATCGCAATGCCCAGGCCTGCACAGATACGCTGATGAAGGCGGTGCGGGAAATCGGCGAGTCCAAGAAGCACGACGAAACTGTATTCAAGCCGCTCAAATTTGTGCACGACTCCCCGGAGGAGAGTGAAGATGAGCAGGCCGGCTACGATGAGGGCGAACTCTTCGAACCCGAAGCCGAAGCGGATGCAgaagacgatgacgacgacggaGATGCTGATGCAGATGGAGATGTCGATGCGGATGCGGATGTGGATGGTGATGGCGGTTATTCGTTGCGGCATTCGCCGCCTGCTGTACCAGCCGAGCACACAGGTGGCAAATGGAAACCGGAGCATCGACCCCAACTACACGTAGTCACGCACATGCAGCGCATTTCCCCCAACTGGGACGAGCACGTGGACGAGCCAGGCGAGGAGCATCCGCCCGAGGAGCACACACGCGGTAAATGGGTGCCGGGCAGCAAAATGTTGGAATACCGCGAGAACCTAATCGATCTGACCCGACTGAGCCAACCGAGCACCTATTGGTGCAACATTTGCTGTCGCAAGCTCAACAGTTGTGCCAACTACGAGCAGCACTTGAAGACCGGCTACCATCGACGACGCGCCGACGGCGAACGTCAACTGGAACAGGCCAAGCTGGGCGGTACCTTGCGCATTGGCGAGAATTTCGACTTCGAACGGGAGGAGGAGGCAAAGTCCGAGGTGCCGCAACagcgttgtcgtcgtcgtcatcgtcgggCCAATTCGCTGCGCTGCGATCTCTGCCGTCATAACGTGCAACGTCATCTAATGGGCAAGCATCTGATCTCGCACTACCACTACCGCCGTCTCCAGCAACAGCAGACCGAGACCCGTCGCCAGAGCGCCCTGCACACAATACTCGAGCATATGCCTAGCATTGTGCTGCAGTCGCCCTTCCAGTGTCGACCCTGTCGCTTTTATTGCAACACTCAGTCCACGTTCCTCACCCACTGGCAGTCCGAAGCGCATCTGCAGCAGACCAGTCGGCTGAAGGACTTGAGGACGCACTTCTGGTGCAGCTACTGCCAGTACGAGTGCCCCAGCAATGAGGAAATGTTGTGCCACCTCCTAAGTGGCACACACGAGCAGGTTCTGCTCGCTCTCAATCGATCAGTGCCCATCTGCATTGGACAACGCCAGCCAGTAGTGTGTACAGTATGCGATCAGCACTTTATATCTAACATGGAACTGAGACAACATTTTACACGTGACCATGTGGGTCTCACAATTACGGGCAGTGCTGCTGACAACTACCAGTGCCGCTTCCGATGCGATCTGTGTGGAGAACCGCAGCGATCACGAATTGCGCTGCAACGGCACGAGAAGCGCATACATCGTTTAAACAAATACTATTGCGCCATTTGTCATCTGGATTTTGAAACAGCGCTCCAGGCGCGACGCCATCGCAATCAAATGCAGCACAAGCGAAAGGCCAATCGATTGAAGAgcagaacaacaacacaaagCAATGaaACAACAACTCAAAATGAACTGGAACACATGCTACGCGAGGTTCTGGACGAACCCAAAGAGCCCATCCCGAAGAAGACAGTTACTAGTCCGCCCGCGAAAAAGAGTCGCCAGCAATTGAAATGCGTCAATTGCCAACAAATCTTTGATACTCCGCAAAATCTTGCCCAGCATCGCGTCGAAGCACACGCCGCAGACAGTCATCCCTGTCCTAGTTGCGGAAGTAGCTTTCAGTCCGCACAGGCCTTAGGGCGTCATAGTCGCAGCTGTCAACCGATGGCTTCTACATCGGCGGCCGCTGCCGCAGTCAGAGCCCTCGACCCGGAAGAATCTGGTAGCAGCTCTAAGCTCCGACACTGCAGTGAGTGCAACTTCCGAACGCCGTATGAATCGGATTTGCTTTATCACCGCTTCTTTCACACACACGGCACTATTGGCAAGAGCGAGGTTCTCCAGTGCCCTTTGTGCCCCAAGGGATTCCGCAAGCACTCGCTGCGCGATCATTTGCGCAATCACACAAACGAACGCATATACGAGTGCACCGAGTGCCAGATGAAGTTTGTCCGGCGCCACAATCTCAAGAATCATATGGCAACGATGCATAGCCAATACACAAAGCGTGCCGTAACCAAGCCGCAAAAAAAGGAGcccaaagaaaaatttcaatgcGGCACATGCGGCAAGATATTGTCCTCGAAGTACTCCCTGAAGCAGCACGAATTGACGCATGGAAAGGTCGAACGTCGCTTTCGATGTCACCACAAGGACTGCCAGTATGCGGGACTCACGCCCGAGAATCTAAAAAGCCACTTGCTCTCCCATGCCCAAGGTGCTCACAAGTGTGAGCAAGCGAGCTGCACATATGTCGGCAAAAGTCTCAAGCATTTAAAGAGACACATGACGTCACACTCAACCGATCGAGACAGCCAGAAATTGTTGCAGTGCGAACGCTGCAAGTTCAAGACGCTCGTAAAGAGTCATTTAACCCGGCATATGCGATGCCACACGGGTGAGAAGCCACACCAGTGTCCTTATTGCGACTTCCAGTGCAGCGATTTCGACTATTTGCGGAAGCACATCCTTAAGACTGACAAGCATAAAGGGAAGTTCGTATATGAGTGCAGTATTTGTGTGGCGGAACAGGCAACAGAGGTCTTCAAGAGCAATCAGCTCAAGGAATATCAAACGCATATGAATGTTCATAAAAGGAAGTAA
Protein Sequence: MNVDDLDDTHLCIKCNATIVGLEKYIEHRKQNCLATTGHVGGSVGLAKSVARPMPLPTTTIQESNSVTVSPPIISRSSLDHTYDGFHFTEPEAPSSYLRKTAASHGGKTSKSLTDAYDLTLGADVFFSSLQLQSVQGGKTGSARHERHKSRSADQSDEQRDELPWHRNAQACTDTLMKAVREIGESKKHDETVFKPLKFVHDSPEESEDEQAGYDEGELFEPEAEADAEDDDDDGDADADGDVDADADVDGDGGYSLRHSPPAVPAEHTGGKWKPEHRPQLHVVTHMQRISPNWDEHVDEPGEEHPPEEHTRGKWVPGSKMLEYRENLIDLTRLSQPSTYWCNICCRKLNSCANYEQHLKTGYHRRRADGERQLEQAKLGGTLRIGENFDFEREEEAKSEVPQQRCRRRHRRANSLRCDLCRHNVQRHLMGKHLISHYHYRRLQQQQTETRRQSALHTILEHMPSIVLQSPFQCRPCRFYCNTQSTFLTHWQSEAHLQQTSRLKDLRTHFWCSYCQYECPSNEEMLCHLLSGTHEQVLLALNRSVPICIGQRQPVVCTVCDQHFISNMELRQHFTRDHVGLTITGSAADNYQCRFRCDLCGEPQRSRIALQRHEKRIHRLNKYYCAICHLDFETALQARRHRNQMQHKRKANRLKSRTTTQSNETTTQNELEHMLREVLDEPKEPIPKKTVTSPPAKKSRQQLKCVNCQQIFDTPQNLAQHRVEAHAADSHPCPSCGSSFQSAQALGRHSRSCQPMASTSAAAAAVRALDPEESGSSSKLRHCSECNFRTPYESDLLYHRFFHTHGTIGKSEVLQCPLCPKGFRKHSLRDHLRNHTNERIYECTECQMKFVRRHNLKNHMATMHSQYTKRAVTKPQKKEPKEKFQCGTCGKILSSKYSLKQHELTHGKVERRFRCHHKDCQYAGLTPENLKSHLLSHAQGAHKCEQASCTYVGKSLKHLKRHMTSHSTDRDSQKLLQCERCKFKTLVKSHLTRHMRCHTGEKPHQCPYCDFQCSDFDYLRKHILKTDKHKGKFVYECSICVAEQATEVFKSNQLKEYQTHMNVHKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -