Basic Information

Insect: Scaptodrosophila lebanonensis
Gene Symbol: L
Assembly: GCA_003285725.2
Location: NW:29312897-29321843[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 8.7e-06 0.00054 19.9 2.9 1 23 166 188 166 188 0.98

2 16 0.3 19 5.6 6.2 1 23 194 216 194 216 0.97

3 16 1.4e-07 9e-06 25.5 3.2 1 23 222 244 222 244 0.99

4 16 1.1e-05 0.00066 19.6 0.4 1 23 250 272 250 272 0.99

5 16 0.053 3.3 7.9 0.1 2 23 344 367 343 367 0.90

6 16 0.00057 0.035 14.1 0.4 2 23 386 408 385 408 0.96

7 16 1.1 66 3.8 0.3 1 23 495 517 495 517 0.94

8 16 0.00052 0.032 14.3 0.7 2 23 525 546 524 546 0.96

9 16 0.00044 0.027 14.5 0.3 1 23 554 579 554 579 0.94

10 16 0.0022 0.13 12.3 1.1 1 23 688 711 688 711 0.97

11 16 0.11 6.7 7.0 0.5 1 23 882 906 882 906 0.95

12 16 0.01 0.64 10.2 3.8 2 23 915 937 914 937 0.96

13 16 0.034 2.1 8.5 0.1 1 23 943 965 943 965 0.92

14 16 0.59 37 4.7 0.3 2 23 1088 1109 1088 1109 0.94

15 16 0.0054 0.34 11.1 0.0 1 23 1119 1141 1119 1141 0.97

16 16 0.014 0.85 9.8 1.3 1 23 1148 1170 1148 1170 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	8.7e-06	0.00054	19.9	2.9	1	23	166	188	166	188	0.98
2	16	0.3	19	5.6	6.2	1	23	194	216	194	216	0.97
3	16	1.4e-07	9e-06	25.5	3.2	1	23	222	244	222	244	0.99
4	16	1.1e-05	0.00066	19.6	0.4	1	23	250	272	250	272	0.99
5	16	0.053	3.3	7.9	0.1	2	23	344	367	343	367	0.90
6	16	0.00057	0.035	14.1	0.4	2	23	386	408	385	408	0.96
7	16	1.1	66	3.8	0.3	1	23	495	517	495	517	0.94
8	16	0.00052	0.032	14.3	0.7	2	23	525	546	524	546	0.96
9	16	0.00044	0.027	14.5	0.3	1	23	554	579	554	579	0.94
10	16	0.0022	0.13	12.3	1.1	1	23	688	711	688	711	0.97
11	16	0.11	6.7	7.0	0.5	1	23	882	906	882	906	0.95
12	16	0.01	0.64	10.2	3.8	2	23	915	937	914	937	0.96
13	16	0.034	2.1	8.5	0.1	1	23	943	965	943	965	0.92
14	16	0.59	37	4.7	0.3	2	23	1088	1109	1088	1109	0.94
15	16	0.0054	0.34	11.1	0.0	1	23	1119	1141	1119	1141	0.97
16	16	0.014	0.85	9.8	1.3	1	23	1148	1170	1148	1170	0.98

Sequence Information

Coding Sequence: ATGATGGCTTTAAAGATGTTGTACCGTGGGCCCAGTTCGCGTTTGgagaatttaattgaaaaaattcaGGCAACGAaggaaataacaaataatgACATGTACTCTACGCACACCTCCTCCAGCTATTCGCCCTCGATCTCTGATGGCACGATCACGCCCAACTCACACAAAACACAAGTGGCACACACGGGGGAGCAATCCGAGTCTGCGACTGTCGTCTCCAACGGTGAAAACACAAAAGCCAATGGCCAAGGTGCTGGTGAAGAACAATTGCTTGCCACAGTAGCTCCCAAGTCGAAACGCCCGCCACACttgcatcatcatcaccaaTACCATCAGCAAGTACTTAAAATTGCCAACAAGCTGCGCAAAGTTAAGAAAGAAACCAAAATGCAGATGGGTGGTGTGGCACCTGGGGCGGCAGGCGGCAGCAGCGCCTCCACAAAGTTTGATAAGTTGACAAGCGAAGGCATTAAAAGCAGTAGCGACGGTTCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGACTTGGTTATTTGAAGCATCACGTGCAGAGCCATGCCGAGCATTTGCCTTTTAAGTGTGAATACTGCGCTAAGCTATTCAAGCATAAGCGTTCCCGAGATCGCCACAAGAAGCTTCACACGAACGAACGAAACTACAAGTGCCCGCACTGCGAGGCGGCATTCTCCCGAAGTGATCATCTAAAAATTCACATGAAAACCCATGACATTCAGAAGCCTTTTCAATGCAGCATGTGCAATCGGGGCTACAATACAGCCGCAGCACTAACCTCACATATGCAAAAGCACAAGAAGAACGCCGCCATCCTAGCAGCTGGAGGTAATCCTAATGCACTTAACTACAGTCCACGCTCTACAGGATCTGCGTCCGCTTCAATCTCGAGCAATGGTAGCCTGCATAAACGGCGCTATGCCCTCGCCTTAGCAGCATCTGACAGCAGTCCTAACCACCAAGAATTTTCCAAGCGGGGGCGGAACCACGTAACGCCTACGCCACTTTTACGCTGCAGCTACTGCCCCAAGGCTGAATTTAGTAGCTTGGAGGAGCTGAACTTACATTTGCAAAGCATTCACGAGCAGGCTCCACAGCTCGAACCAGCGAACCAGGTAGACGACGGTTTTCACCTGAGCTGTGAGTACTGTACAATGAAATTTGGAAACATTGCCGGCCTCTTTCAACACATGCGTACCACGCATATTGATCGTCTGAACAGTCCTAACTCATATTACGAACACTTTAATCGCCTGGCTACCGCTGGAACTTTCAGTCCACGGCTAGTGCTTGAACAGATACCTAAGAACAAACGTGATGTGACAAGTCCCACGCAGCCAACTCCTAAGTTAACCGAAGAGGGACCCACAGATCTAAGCAGTAACAATCGTCACGTTGCCACCGCAGTCTCCCCACGCGGCTCGCCTGCCCTCCATTCTCAGGGCCATTCCGCCCCAGACGTTTTCTTATGCAATCAGTGCAACGCTGGCCTCCCAGACTTTGAAAGGTTTCGAATTCATCTGAAGTCACACATCGCCGAGGGATTGCAGCTTAACTGCCCCCACTGTGGGCTAACGCTGCCAGATCAGTCTGAGTTTGAACATCATGTTGTCACCCACTTTCTGATCCACAACTCTGAGTTTTACTGCACGGCCACAGATTGCAGTAAAGCATTTAGCAAAGTTGATGAGCTCCAAAAGCATTTGGTGAGTGAGCACGTGCTGACCATGCTGAAGTGCGCCATCTGCTCTGagctctgcgattctcaaatGACCATGCGGTTGCACTTTGCTTGTGCTCATAGTCAGGAAACGAAGCTGCTCCGATGCAGTGCATGTATGGAGCTGTTTCATAGCGAACCGGAATTCCATGCACATGTTCGTACACGTCATCAGTTAGCTGCGAACCATGGTCACTGCCACAATGAACTCCCTCCCGCGGCATCGGTGCCAGGTGCGAACACGCTTCAATGCATGTTTTGTCGCGTAGTCTGCACTTCGGAGCTTGAAATGCACTTTCATTTGGCAGCACATGCACGCCAGTTTCGTTGTCCATCTTGTCCAGAGACATTTCACGTTGAATTTCTGCTCGACCGGCATATGCAAAGTCAACATGGTGGGAACATGGCCGGTGCCTTGGAGGAGTGTGCAGCCAGCGACAAGGAAAGCTCCGATGAGGCTCCTGCAGCGCCTTCCAACTCGCTTAGCCCCATAAATAGTTTGTATATAAATGCACTGTTTGGAGCCAAAGCGCAGCCATTGGGTTCAATTGCCGGAAACAGCAACTTAAACGCCactacaaacaacaacaatagtattCTTGATTACAATGTAGCTTTTGCTGCTTCTCAACTGCAGCATAATGGACTGTTTGCTCCCCCACCAATAGGCGCCAGCCCTGGAAAATTCTATAATCCACTCCAAGTGGATACTGTAGGCCTCAAGCCATCCCACCCAGCGCTTATGTATGGAATAAATCAGCGATATTTCGACACGAATCGGGCTCTGATGGAAATGTACGCTACTCAGCAATCCAAATCAGCAGGTGGATATGCCGCACCAAGTCCTAAAACGCAGGGCAAGGCTGAGACAGGCAGTGGGAGTGCTGGCTCTGCTGTGAACGCTTATAGCTGTGGGATGTGTGACCGCCAAGATTTTCGCAGCGAGACAGAACTTCTCTCGCATCGCAAAATCTCGCACAACATGAAGACAGGTGTAAGCCTTCGATGCGCCTACTGTGCCGGAAACTTTAAGTCCCGCAACGAACTGGAACACCACATGAAAACCTGTCATAACTCGACGGGCAAACACAAATGTCTCATCTGCGACGAGGTCTTTCCGTCACCAGCCATTCTCGCAGAGCACAAGTTGCAGCACTCAAAGGTGGGCCAATCAGGCAAATGTTGCCACTGCGCCAAGCCGCTGCCGGATGTAGCCGCCTTTAAGGGTCACCTGCATGAGCATGgtcacaacaataacagtagCACTGCGCCCGTGCAATGTATATGCTGTCGGCAGACCTTGCACTCGGACTTTGAAATTAGTCTGCACGCCAAATTTCACACAAAATCAAGCAACAGTGTGCAAGAGCCAGTTTGCGCTCTTTGCTTAGAACCACTgcCGGAGACTCCACCCGTGAGAGCGAAGGTATGTGACAGGTGCTGGCGAAAACACAGTTTAAATTCCAAACCGCGAAAGTCCAGCAACTCGGGACTTCCAGCATCGCCACTGTTCATCGAGAACCGCTGCAGTCTCTGTAAAATGATTCTTCCCCATGCTGCCAAGCTGCAGGAGCATCTGGTGGAGCATACATTTTCCGGTACAGGGGAACGTGGTTTCAATTGCTATATCTGTTCTGCCGTATTCACAGCGCCCGCGGGTCTCCTCAACCACATGCTGGAGCATGGACCCCATGCTCGTCCATACGACTGTAACCTGTGTCCGGACAGATTCTATTTTCGGGCCGAGTTGGATCATCATCAGCGAGTACACGAGCTGAGGCCTGTGGACGCAAATGTCCCTTCAGCGCCGACGCCCGGAGCCCCACCTAAGCAGCAGCCTATTACACTATCTAACCCAGCTGTTGTGAAGGGTGAGGCCTATGAAATGCCGACCACAGTAGCTTCACCACCGATAGAAAACGCCCAGGAGGAAGAAGAATACATTGAGGTAGAGCAAATGCTACCTGAAACACGTTCAGCCACAACAGAGGAGCCAAGTTCAGGGTCTATCAGCAAAGAACATTCCAGCAGTAGCCCCTAG
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTITPNSHKTQVAHTGEQSESATVVSNGENTKANGQGAGEEQLLATVAPKSKRPPHLHHHHQYHQQVLKIANKLRKVKKETKMQMGGVAPGAAGGSSASTKFDKLTSEGIKSSSDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASASISSNGSLHKRRYALALAASDSSPNHQEFSKRGRNHVTPTPLLRCSYCPKAEFSSLEELNLHLQSIHEQAPQLEPANQVDDGFHLSCEYCTMKFGNIAGLFQHMRTTHIDRLNSPNSYYEHFNRLATAGTFSPRLVLEQIPKNKRDVTSPTQPTPKLTEEGPTDLSSNNRHVATAVSPRGSPALHSQGHSAPDVFLCNQCNAGLPDFERFRIHLKSHIAEGLQLNCPHCGLTLPDQSEFEHHVVTHFLIHNSEFYCTATDCSKAFSKVDELQKHLVSEHVLTMLKCAICSELCDSQMTMRLHFACAHSQETKLLRCSACMELFHSEPEFHAHVRTRHQLAANHGHCHNELPPAASVPGANTLQCMFCRVVCTSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGNMAGALEECAASDKESSDEAPAAPSNSLSPINSLYINALFGAKAQPLGSIAGNSNLNATTNNNNSILDYNVAFAASQLQHNGLFAPPPIGASPGKFYNPLQVDTVGLKPSHPALMYGINQRYFDTNRALMEMYATQQSKSAGGYAAPSPKTQGKAETGSGSAGSAVNAYSCGMCDRQDFRSETELLSHRKISHNMKTGVSLRCAYCAGNFKSRNELEHHMKTCHNSTGKHKCLICDEVFPSPAILAEHKLQHSKVGQSGKCCHCAKPLPDVAAFKGHLHEHGHNNNSSTAPVQCICCRQTLHSDFEISLHAKFHTKSSNSVQEPVCALCLEPLPETPPVRAKVCDRCWRKHSLNSKPRKSSNSGLPASPLFIENRCSLCKMILPHAAKLQEHLVEHTFSGTGERGFNCYICSAVFTAPAGLLNHMLEHGPHARPYDCNLCPDRFYFRAELDHHQRVHELRPVDANVPSAPTPGAPPKQQPITLSNPAVVKGEAYEMPTTVASPPIENAQEEEEYIEVEQMLPETRSATTEEPSSGSISKEHSSSSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -