Basic Information

Gene Symbol
hang
Assembly
GCA_003285725.2
Location
NW:531040-552764[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.24 15 5.9 1.0 3 23 299 320 298 320 0.93
2 19 0.4 25 5.2 3.6 3 22 426 445 424 445 0.89
3 19 0.00052 0.032 14.3 3.3 1 22 537 558 537 560 0.90
4 19 0.062 3.8 7.7 0.1 2 21 572 591 571 592 0.93
5 19 0.0006 0.038 14.1 0.2 2 23 715 737 714 737 0.95
6 19 0.0017 0.11 12.6 0.1 1 23 745 768 745 768 0.96
7 19 2.2e-05 0.0014 18.6 0.2 2 23 858 879 857 879 0.97
8 19 0.00025 0.015 15.3 2.9 2 23 971 993 970 993 0.97
9 19 0.02 1.2 9.3 0.2 2 23 1002 1024 1001 1024 0.95
10 19 0.00069 0.043 13.9 0.2 1 23 1037 1060 1037 1060 0.97
11 19 0.00011 0.0068 16.4 1.1 1 23 1098 1120 1098 1120 0.99
12 19 0.0017 0.1 12.7 0.9 1 23 1128 1151 1128 1151 0.96
13 19 2.2 1.3e+02 2.9 0.2 2 19 1159 1176 1159 1177 0.92
14 19 6.3e-05 0.0039 17.2 0.4 3 23 1267 1287 1266 1287 0.98
15 19 0.0044 0.27 11.4 0.1 1 23 1322 1344 1322 1344 0.97
16 19 0.00014 0.0089 16.0 1.0 2 23 1416 1438 1415 1438 0.93
17 19 1.2 72 3.7 0.1 2 20 1458 1476 1457 1478 0.91
18 19 0.0056 0.35 11.0 0.3 3 23 1493 1513 1493 1513 0.98
19 19 3.2e-05 0.002 18.1 2.5 1 23 1862 1884 1862 1884 0.99

Sequence Information

Coding Sequence
ATGTGCGACTCTGGCGTCAGCACCGCCGCCACAGCTGCCACAGCCACATCAACCTCAGTAACGGCGACTTCTTCAGCATcagcgacgacgacaacggATCAGCTCGGGGCGCGACAAAATTGTTGCCGACTTTGCATTGCCCCCGCAACCGAATGCATTTCGATCATCAATAGCTATGCCGCCGATAAGGAACCGTTGCATACAAAAATACAGAACTGCGTTAATATCAAGATCACACCACAGGATCGTCTATCCTTACAAATCTGCCATGCGTGCATTAGCTACCTGAATTCATGGCAGAGCTTCAAGAATCGCTGCCTCATCGCACAGGCTAAGCAACGCAATTGGGTGGAGGCtaataaaaacagcaacagtaataataataacaccaccagcagcaacaacaaacagcagcagcagcagcaacaacagcagcaacagcagctctTGAACTATTTGGATTTGAACAGCACTGAGAATGGcgatcagcagcagcagcagcaacaacaacagcagcagcagcaacaacaagagctggACGATGCGGCTGCCGTGGAAAAAGCAACATCCCAGATTTTGGAGGGCATACCCTCGCTGAAGAAACGCAAATCTTTAACAGTCTATCCACTGCCCGCCATACCCATTAAGGATGAGCCCATTGATATGGACGAGGACTATCAAATGAAGTGCATAGATGAGTCCGATGATATGGTAGATCCAACTATGTTCCTAGAACGCTCTGAGCATGAGGGCGATATGCCGCTTATGACATCCGACTATGACTTTTCGGCCCAGCAGCATAGTGTCACCACAGCTGCCGCAGTGGCTGCGGCCGCACTGCCCGCGAGTGCTGTGGCCAATGTGGCCGCTGCTGGAGACTCGAAGGTGGCTTCCTGCCGTGCCTGTAGCCTGCAGTTCAGCACTCGTGCCAACGCGCGTCGTCACGAGCGAAATTTGCATCCAAATCTCTTTCAGTTGTCCACAGACTCACCCAACAATACGCCCATCACGAAGCCCACACCTGCCCTGGCTGCTGCGCTGGAAATGAAGCGTGCGGCCGCCGCTGCTGCGACTGCAGAGGCAACACGCGCCGCCGCCAGTGGCAACATTTCGACGCAAAAATATCGGCAGGTGGTGATGAATGCATTTATTAAGTGTGAAGGCGGCGGCTATGACTACGAGAATCCCGAACAGTATCAGCATTTGCTGACGAGCGAGAAGGTAGAGTTCATTCAACAGAATAGCGAGTTTCTGGAGCAATATCAGACGATGACGTGTCGCTGTTGCAACAAGTTTTTCAACACCTACAAGAACTTTATGGCGCATGTGCGTAAAAAGTATCCGCTGCTCCCTCGCAATCTGTGCTTCAATTGCCTCAAGATGAACGAATCGAAGGCGTTGTTCATCTCCCATCTAAAAAAGCGCAACTGCATTAATCTGTACAAACTTTTGAATGGCATACGTGCCAAACAACCACATTTTACGCCCATAGATGGGGTTGGTGCGGCGGCCTCGGCCGCATCCTCATCGGCGGCCACAGCCACACCGACGACAGAGTCGGGGGCACCAGAGAAATTGCGCGCCAAGGAGCTTCTTGTGAATAAACTCTATGAATGTAAATTGTGTCCGAAAGGTTTTCGGACCAAGCACGAGTTCCGAACACATGTCTATGACAAGCATGCGGATGTACAGCGCAAGGATAACAACTCGATACAGTGCAGCTTTTGTGGTCTGGACTTTGTTGATCCGGTGGATCGACGTCGCCACTACAACAATATGGCCTGCATTGTTCGCTTGCGCTGCATGACCTGCGATGCCAAGCTTGAGACGCATCAGCGCTTCTTGGATCACGTGTATCAGGATCATTTGGGCGGCATGAGCAGCGATAATGCGTCCAGTGTGAGTGGCGTGGCGCGTAGCAATAGCGTCGAGCATTCGCCGGGGAAACGCAGCCTGTTGGGCGCCCTCGGTATCGGGGTATCCTCCTCAAATGAGGAGTCCCGTGGCAGTAGCGCCATCTTGACATCGACACCCAAGCCAAGTGGCAGCGCAACTCATCAGCTGTCATCGTCAGCGCCGACTGGGGGCAGCAATAGCTCCGGACAGCCGCCAAAGTCACAATATTTCTCGCGTATGCCACAGGTTTGTCCCATTTGTGGTCAACAGTACAACAATTATAACAATGTGCTCCGACATATGGAGTCAAAGCATCCCAATAAGCTGCCTGAGACGTACAAATGTGTTAGATGCGGCCTCGGCTATCCACGTATCTCCTATCTTCGCGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGGCATTCCGGCGGCTTCGAGTACATCGTGAATGCGGATGCCGTCAAGTTGGCCGATGGCAGCACTCCCAATGTATATACCGGCCGATATGACTATGTGATGAAGGATTTGATGTCGATAACAAATGGTGGGACACTCGaagatgaagaagaagaggttGGCGTGGCCAAGAAGATGCGCCTGGATGAGAGCGGCAATGCAGCAGCTGtgagtaataataatagcgGCAGCGTTACTGGCAACCAACAGAAGGAATGCCCCATTTGCAATGCCATGTTCAGCAACAACATTGGACTCTCGAATCACATGCGCTCCCATTACACGGCCTCGAGTGCCACAAACGCCGCACTGGCTGTGGCCAATCGCATGACACCAAAATCGCTGACAATTACGGCGACCAGTTCCGGACCCTCAACAGCAGCTGCCGCCCAATCAGCGAGCACATCAGCCGCAACGTCATCGGGCTCGGCATCGGCGAAGCTAAGTAGCAGCACCAGCCTGCCGCCAGCGATGCTCAACCAGACGCCACAGGAGCAGGCGGTCTTCCGTCGTAGTCTCGATCAGGCGGCCGATCGACGCTTCCGTCGCATGCGCTGCCGCATCTGTCAGCGACGCTTCAGCTCAAAGAAATCCTATCGTTATCACATGCTGACCGACCATCAGGTGCAGAATGTTCAGTTCATTAAATGCAAGCTCTGCAATGCGGAATTTGCCTACGAGAAGGGTCTCAAGGTGCACTTGTTTAAGGTGCACGGCACCGTTATCAAGGACGAGATGATTGTCAAGCAGTTCGAGTGCGAGGTCTGCTCCATCGTGTACAGTTCGGAGATGGAGTTGCAGCAACACAAACGCAGCGTACACAAGCTGTCATCTGCAGAGTTGGCGGCTGGCGACGATGGGCCGAGCATTAAGGAGGAGCAAGCCGAGCCAACGCCATCATCAACAGCGGCGGCTGCTATGCCACTCTACTGGTACCAGTGCAAGTATTGTCCTTCCAATTTCAACACCAATAAGAAGCTGGCCATACACATTAACTCGCACGATGAGTTCGACTCGAATGACTATTCGTGTAAGGATTGCGGAAATGTGTACAGCGGTCGCAAGAGCCTTTGGGTTCATCGCTACAAGAAACATCCTCAGGTACCCGATCCCGCCGAATGTGTGCTCTGCCGCAAGATATTCTTTGACCGTCAGATGCTCGACAATCATACGCCGACATGCAACCGTAAACCCATTACGGCGACAGGTGCTCATCAGCAGGACGGCAACGGAGGCGTTGCCACGACCTCGGCATCTGCTTCGCGCGCCGTTTTCAAGCACAAAACTggcgacgatgatgatgacgaggaGGATCAGCAAATTATGCTCGATGATGGAGCCGGCAGCGATAGCAATGCTGGCGGAGGCGGCGGCGGCACACACATTGCGGGCACCTCTTCATCGGGAGCGTCGCTCAAGATACGCATTCCTGAGGTGGCATGCACTATTTGCGGGGCTCGTTTCACCGACCAGGAAATGTTTAGCAAGCACATACAGAAACATGAACAGGACCTCTATACGGATAATCCGTTGGCAGCCATGTTCGATGACGGACCAGCCGATCCGGGCCAATTCTATTTGGAGCGCCAGAACGAGAATGGCGAGTACGCGTGTGATTTGTGCGCTAAGACCTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCAACGACGGCGAAGCGACAGCCAATGTGgcgaacagcagcaacaacaacaacagctcgcTGAACTCATCGATGCTGCATCTACGGGAGCTGCACGCAGTGGGTCTGATGCCcaatcagcaacagcaacaacttcaCAAATCGGCGACATCGTCATCGAGCAAGTCGCTGAAGCGCAAACGTGAGCTCAAATGTGAGTATTGTTCGTCGACGTTCATCAGCAATAACAACTTGCGTCGTCATATGTACGAGCTGCATAAGCATGAGGTAAGCAATTTGCCTGAACCCCCCGTTATTGAGGTGGATGCTCCTCTGTCCTGTCGCCGTTGCAATTTAAAGTTTGACACTAAAGAGCTGTGGATCGAACACAAGCTAGCCGATGCGAAGGTAACGCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAATATTTGTCGCGCAAAGAGAAGCTCATCAATCACATCAATAATCATCTTAAGGAGGATGTCATTGTACCAGTGGTGGTCAAGCCGCGGCCCAAAACGGCCAATAAAATGTCATCAATATTCAATAAGACAGGGAGCAgtgcaacggcaacagcacaaccagcaacaacagctacaagtACAAAAATATCGAGCAAGACAACGACAATACAGTCGCGTGATGATGCAGAAGATGAGGCTGAGGACGATGACGAAGGTGAGGTTGAAGTTGAGGGTGAGGGCGAGGGCGAGGCCGAAGGTGATGTTGATGATTCAACGGATGATGAGGAGATAGAAACAGAGACAAAGACGgctcagcaacagcagcagcaacagccaaaTATGCTCAAAGCAATGTATGATGGTGAGGAGGAAGAGGATGAAGACTCTGATatggatgatgatgatggcgatgatgatTCAACAGATGATGAGGATACCTCCGGCGATGATGAGGACGATAGCGATGAGGAAGAAGAGGAGGTGGCCAATGAGAATATTGTTAAAGTattgcacaacaacaacaatacgacaaacaaaaacaatagtaCTACtattgatgatgatgaagatgatgatgatctGATTGAGCAGGTCGATGAAGAAATGGATGAAGACGTAAATGATGATGTTGAAGAAATAGAcgaagatgatgatgacgaagaTGATAGCGAAGACGATGACGAGGAGATACCCTATGAAGGTTATATGCATGGCCAGAATAATACCAATAGAGGTCATGTGGCCAAAGTCAATGGCAAaaagcaacaggaacaggCGGCCAGTTCGGAGGAAGAAAGCGATGTTGATGGCGATGTCGAAATCGACGGCGAAGTCGATGGCGATGCCGATGAGGATGTTGAAGATGATGAGGTTGGTGAAGAAGGCGTTAATGAAGCCGACtctgatggcgatggcgatggtggAGATGCAACGTCATCGTCGGAAAGTGAGTCAACGACATCGCATTCAACGGGTGAGCGGCGTAaaaatgcaacagcagcagctaaaAATACTAAAGCTAATGCTGTTGACAAGTCTAATAATTCGAGTTATACGTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCAACTGCAGACTCATATCAAGAGTCATTTCCTTAATGGGCCTTCGGCAGCGAACCGCAGCAGCAAtgcggcagcaacaaacaacaacacaagtaAAACcactataacaacaacaacaacgtccaGTGCTGGATTGGAaactaaaaatttgaaaacatctgcaacagcaacatcaacggcagcagcaacaacaacaacagcaaaaacaacaacgactgcCAGCAATTGA
Protein Sequence
MCDSGVSTAATAATATSTSVTATSSASATTTTDQLGARQNCCRLCIAPATECISIINSYAADKEPLHTKIQNCVNIKITPQDRLSLQICHACISYLNSWQSFKNRCLIAQAKQRNWVEANKNSNSNNNNTTSSNNKQQQQQQQQQQQQLLNYLDLNSTENGDQQQQQQQQQQQQQQQELDDAAAVEKATSQILEGIPSLKKRKSLTVYPLPAIPIKDEPIDMDEDYQMKCIDESDDMVDPTMFLERSEHEGDMPLMTSDYDFSAQQHSVTTAAAVAAAALPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEMKRAAAAAATAEATRAAASGNISTQKYRQVVMNAFIKCEGGGYDYENPEQYQHLLTSEKVEFIQQNSEFLEQYQTMTCRCCNKFFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNESKALFISHLKKRNCINLYKLLNGIRAKQPHFTPIDGVGAAASAASSSAATATPTTESGAPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFVDPVDRRRHYNNMACIVRLRCMTCDAKLETHQRFLDHVYQDHLGGMSSDNASSVSGVARSNSVEHSPGKRSLLGALGIGVSSSNEESRGSSAILTSTPKPSGSATHQLSSSAPTGGSNSSGQPPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLEDEEEEVGVAKKMRLDESGNAAAVSNNNSGSVTGNQQKECPICNAMFSNNIGLSNHMRSHYTASSATNAALAVANRMTPKSLTITATSSGPSTAAAAQSASTSAATSSGSASAKLSSSTSLPPAMLNQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGTVIKDEMIVKQFECEVCSIVYSSEMELQQHKRSVHKLSSAELAAGDDGPSIKEEQAEPTPSSTAAAAMPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECVLCRKIFFDRQMLDNHTPTCNRKPITATGAHQQDGNGGVATTSASASRAVFKHKTGDDDDDEEDQQIMLDDGAGSDSNAGGGGGGTHIAGTSSSGASLKIRIPEVACTICGARFTDQEMFSKHIQKHEQDLYTDNPLAAMFDDGPADPGQFYLERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPNDGEATANVANSSNNNNSSLNSSMLHLRELHAVGLMPNQQQQQLHKSATSSSSKSLKRKRELKCEYCSSTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDAPLSCRRCNLKFDTKELWIEHKLADAKVTRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVVVKPRPKTANKMSSIFNKTGSSATATAQPATTATSTKISSKTTTIQSRDDAEDEAEDDDEGEVEVEGEGEGEAEGDVDDSTDDEEIETETKTAQQQQQQQPNMLKAMYDGEEEEDEDSDMDDDDGDDDSTDDEDTSGDDEDDSDEEEEEVANENIVKVLHNNNNTTNKNNSTTIDDDEDDDDLIEQVDEEMDEDVNDDVEEIDEDDDDEDDSEDDDEEIPYEGYMHGQNNTNRGHVAKVNGKKQQEQAASSEEESDVDGDVEIDGEVDGDADEDVEDDEVGEEGVNEADSDGDGDGGDATSSSESESTTSHSTGERRKNATAAAKNTKANAVDKSNNSSYTCDLCQLCFDSQEQLQTHIKSHFLNGPSAANRSSNAAATNNNTSKTTITTTTTSSAGLETKNLKTSATATSTAAATTTTAKTTTTASN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-