Basic Information

Insect: Scaptodrosophila lebanonensis
Gene Symbol: -
Assembly: GCA_003285725.2
Location: NW:61692-64996[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 8.3 5.1e+02 1.1 0.2 3 12 28 37 26 40 0.88

2 16 2 1.3e+02 3.0 3.1 2 23 305 326 304 326 0.95

3 16 0.0018 0.11 12.6 1.3 1 23 416 439 416 439 0.95

4 16 0.011 0.66 10.2 0.8 1 20 446 465 446 467 0.92

5 16 0.0025 0.15 12.1 4.9 1 23 476 498 476 498 0.97

6 16 1.9e-05 0.0012 18.8 2.1 1 23 505 528 505 528 0.97

7 16 4.9e-05 0.0031 17.5 0.9 2 23 536 557 535 557 0.96

8 16 0.00069 0.043 13.9 0.0 2 21 584 603 583 604 0.95

9 16 0.00033 0.02 14.9 0.6 1 23 658 681 658 681 0.98

10 16 0.02 1.2 9.3 0.3 1 23 718 741 718 741 0.94

11 16 0.0001 0.0063 16.5 1.3 2 23 777 799 776 799 0.95

12 16 1.2e-05 0.00077 19.4 0.5 1 23 813 835 813 835 0.95

13 16 2.1e-05 0.0013 18.6 1.1 1 23 841 863 841 863 0.99

14 16 2.9e-07 1.8e-05 24.5 2.6 1 23 869 891 869 891 0.98

15 16 3.8e-05 0.0024 17.9 4.2 1 23 897 919 897 919 0.97

16 16 5.5e-06 0.00034 20.5 0.4 1 23 925 949 925 949 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	8.3	5.1e+02	1.1	0.2	3	12	28	37	26	40	0.88
2	16	2	1.3e+02	3.0	3.1	2	23	305	326	304	326	0.95
3	16	0.0018	0.11	12.6	1.3	1	23	416	439	416	439	0.95
4	16	0.011	0.66	10.2	0.8	1	20	446	465	446	467	0.92
5	16	0.0025	0.15	12.1	4.9	1	23	476	498	476	498	0.97
6	16	1.9e-05	0.0012	18.8	2.1	1	23	505	528	505	528	0.97
7	16	4.9e-05	0.0031	17.5	0.9	2	23	536	557	535	557	0.96
8	16	0.00069	0.043	13.9	0.0	2	21	584	603	583	604	0.95
9	16	0.00033	0.02	14.9	0.6	1	23	658	681	658	681	0.98
10	16	0.02	1.2	9.3	0.3	1	23	718	741	718	741	0.94
11	16	0.0001	0.0063	16.5	1.3	2	23	777	799	776	799	0.95
12	16	1.2e-05	0.00077	19.4	0.5	1	23	813	835	813	835	0.95
13	16	2.1e-05	0.0013	18.6	1.1	1	23	841	863	841	863	0.99
14	16	2.9e-07	1.8e-05	24.5	2.6	1	23	869	891	869	891	0.98
15	16	3.8e-05	0.0024	17.9	4.2	1	23	897	919	897	919	0.97
16	16	5.5e-06	0.00034	20.5	0.4	1	23	925	949	925	949	0.91

Sequence Information

Coding Sequence: atgttgatTTGTTCATTGAAAAGCATAAACAAACTAAAGAAAAGGGAGAATACGCCCATTGAAATGCAGTTGCCGACTATCTGCCGCACCTGTGATGTGGTGTTTTCCCATACTCTGCACGAGCTGTCCGCTGTAATTGAAAACATGCCCACATTTGAAGGTGGTAAGCACCTTGCGGATCTGGTCAGTGAATTGACGAAAATCGATCTAACTGGAGCGATATCCGACGGGTTGCCCCAAAAACTGTGTGATAGCTGCATGCGAAAGTTGAAAAACGCCTACAACTTTGTGGCACAGGCTCGAACCGCCAATGAGATACTGCTGAAGCATTATCTGCGAAAAGGTAAACCCATCGGTTCGGATGCACCGGACTGCTTACAAGAGATGCCAATGGAGCTCTGCGTTGCTCAGCATGTAgaggtaaaaataaaaactgaaccCGATAACGACGCGGAAGGAGCCCAACACGTTCCTTGTACCGAGCTTTTGAACACGGCAGCAAATCAAACCAAAGCTTTGCAAGGACTAGAGACTGAAAAGGATATCAACATTTTCAAGAAGTCTTTGGATCCATTGGTAATGCCCGAAACTGAAGCAGTTAAATCGGAATCAGACGTAGAATCCTTTTCAAATGGATTTTCTAGCAATGATCTGGATGATCAGGAcTCCCTTGATGATTTACCCTTGCAACAGCGCGCACAAACGTGCAAAAAGAAAAGGgtaccaaaaaataaaaataaaaaaaataagaaaataaatattggtaGAAATCaagacaaatataaaaaactggATGCTGATTATGAGATTGGAACGTGCATAATGCCAAAACGTACTGCAAACCTCAGCGAACGAAAGAAAGCTAAGGAAATGGATCCAAATCTTTGTAAGCCACATGGCTATAAGCTCATTCAATGCATGATTTGCCAAAGTAAATATGACAAAATTTGTCACTTGCGTAACCACCTTGAAGAACACCCCGatatttttggttttgatGAGCAACAGAATGTAAACGTAACTGAAATGGTAGAATTGTTTTATCCCGATCAAAAGCAGCTCAGCTTGGATCAGTTGAAGGATCGTATACATAAGGATTTGAAAGCCGGAAAATACTATCGCTTTTATTCCATAACAAATCAGTCTGGTTACGAAATGGATCTGGACACTTCGGAGACAGAGACTGAAGCAGAAATTGAAACGGAAGAACAAACTACGATACGTAGAAAATCCACAAGAACCAACTATCTTTGCGAGCTCTGCCAGCAAAAGTACCCACGGAAATATTTACTATACGAGCATCAGCGGCAGACACACACTTGGTCCGAGGCTCCCCACATTTGTGGGCGCTGCGATGCACGCTTCGTAAGCTCCAAACTTCTCACGCATCATTATGAATCGCAGTGCAAGAACTCCCAAAAGcgttttatttgccataaatGCCCTCTTCGTTTCCGTTGGAAACACAATTTAAAAGCCCACTACCGTGACCACAAGAGTGCAaATCAAACCTTTGAATGTCACGAATGCAAACGTGTTTTTGATAAGAAAAAATCCCTAACTGTTCACCTGCTTAGTGTTCACGCCGATGAGTCCAAGCTTATTCCATGCCAGTGGTGTAGCCGAAAATTTTATCGGCGTGACTACTTGATTAAGCATCTCAACCGACATGGCTTTAAAGAGCAGGATATTCCACTAGCAGAGACTCTGATAGCTGCTACATCGAAGCCAAATGGTGTTAAGatcattaaatgcaaaatctGCAATATACAGTTTAATCGTATAGCTGATCTGCGTGCTCATATTCAGCTGGAACTAAAGTTGTCCTTAACTTTGCATCAGAATTACGAATCTCCAACCAACTATTCTATAACAAATCAGTCCGGTTTTGAAATGCACCTTGAAGACTCTGAAACGGATGACGAAACACAATCAGAAGCACCTTCTGAGCACTGTAAGATGCCCACGCTCTACGTATGTGACATTTGCAATGTACAGTCTCGTCGAAAGTATGAGATGGTCCAGCATCAACGAACGATGCATCAATTCGACAAAGTACCATATGAATGCGAACGATGcatatttaaatgtgtttcAAAGAACATAATGGAGCAACATAAGGAAGTGCAATGTCATAGTAAAAATAAGAAGCACATCTGTCCCACATGTAGCTATCGGTTTATGTGGCCTGAAAATCTTGAGCAGCACATCCTTCTGCAACATAGCAATATCATGATTAAGGCAACTCCCTCTAAAATTATACACGCTCATCCCTCTGCAGAGTCTAAGCAAACTACAGATGCAAGTGCGTCTGGAGCACAAATATTACAATGCCCACACTGTGATCGAACGTACCAAATGCAATCTCGACTTAATAATCATATTCGAGATGTCCACGTCAACGGGGATCGAAAGCGCAAGGAAGCTCAAAAAAAGTTCCTGTGCTCTCTCTGTGGCAAGGAAACCCAATCAGCCTCAAATTTAATCACACACATGAGAAGGCACACTGGTGAGAAACCATATAAATGTGATATGTGTGATATGGCCTTTCCACGCCATTCTGAAATGCTCATCCATCGTCGGATGCACACCGGAGAGAAACCATTCCATTGCACCGTTTGTGGAAAAGACTTTGCTAGGTCCGATAAGCTAAAGAGACACATGTTGACGCATAGTGGCTTGAAACCGCACAAATGCACTTACTGCGAGAAAAGCTACCGGCAGTCGAAGGATctaaatttgcatttgcaacaACACACAGGTGAGTCTCCCTTTGTGTGTGGCATTTGTGGTGAACGATTTATTCAAAGTAGCACTTTGGAAAAACATCGCATGATGCGCCGTCACTTCGACGAGGTAAAATaa
Protein Sequence: MLICSLKSINKLKKRENTPIEMQLPTICRTCDVVFSHTLHELSAVIENMPTFEGGKHLADLVSELTKIDLTGAISDGLPQKLCDSCMRKLKNAYNFVAQARTANEILLKHYLRKGKPIGSDAPDCLQEMPMELCVAQHVEVKIKTEPDNDAEGAQHVPCTELLNTAANQTKALQGLETEKDINIFKKSLDPLVMPETEAVKSESDVESFSNGFSSNDLDDQDSLDDLPLQQRAQTCKKKRVPKNKNKKNKKINIGRNQDKYKKLDADYEIGTCIMPKRTANLSERKKAKEMDPNLCKPHGYKLIQCMICQSKYDKICHLRNHLEEHPDIFGFDEQQNVNVTEMVELFYPDQKQLSLDQLKDRIHKDLKAGKYYRFYSITNQSGYEMDLDTSETETEAEIETEEQTTIRRKSTRTNYLCELCQQKYPRKYLLYEHQRQTHTWSEAPHICGRCDARFVSSKLLTHHYESQCKNSQKRFICHKCPLRFRWKHNLKAHYRDHKSANQTFECHECKRVFDKKKSLTVHLLSVHADESKLIPCQWCSRKFYRRDYLIKHLNRHGFKEQDIPLAETLIAATSKPNGVKIIKCKICNIQFNRIADLRAHIQLELKLSLTLHQNYESPTNYSITNQSGFEMHLEDSETDDETQSEAPSEHCKMPTLYVCDICNVQSRRKYEMVQHQRTMHQFDKVPYECERCIFKCVSKNIMEQHKEVQCHSKNKKHICPTCSYRFMWPENLEQHILLQHSNIMIKATPSKIIHAHPSAESKQTTDASASGAQILQCPHCDRTYQMQSRLNNHIRDVHVNGDRKRKEAQKKFLCSLCGKETQSASNLITHMRRHTGEKPYKCDMCDMAFPRHSEMLIHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQSKDLNLHLQQHTGESPFVCGICGERFIQSSTLEKHRMMRRHFDEVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -