Sleb001816.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptodrosophila lebanonensis
Gene Symbol
Ouib
Assembly
GCA_003285725.2
Location
NW:12933164-12937790[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.051 3.2 8.0 9.5 1 23 218 240 218 240 0.97
2 21 0.00029 0.018 15.1 4.0 1 23 246 268 246 268 0.99
3 21 0.0025 0.15 12.1 4.1 1 22 274 295 274 298 0.91
4 21 3.6e-05 0.0022 17.9 4.1 2 23 439 460 439 460 0.97
5 21 0.00057 0.035 14.1 2.7 1 23 466 489 466 489 0.97
6 21 0.00025 0.016 15.2 1.5 1 23 511 533 511 533 0.97
7 21 2.2e-05 0.0013 18.6 3.4 1 21 539 559 539 560 0.96
8 21 0.00067 0.042 13.9 8.7 1 23 604 626 604 626 0.99
9 21 0.00065 0.041 14.0 3.2 1 22 632 653 632 656 0.91
10 21 0.00054 0.034 14.2 5.8 1 23 679 701 679 701 0.96
11 21 0.0086 0.54 10.4 8.6 1 23 707 729 707 729 0.99
12 21 4e-05 0.0025 17.8 3.2 1 23 735 759 735 759 0.92
13 21 3.6e-05 0.0022 17.9 1.8 3 23 898 918 896 918 0.97
14 21 5.1e-05 0.0032 17.4 2.2 1 23 924 947 924 947 0.98
15 21 0.25 15 5.9 2.1 1 23 953 977 953 977 0.95
16 21 5.9e-07 3.6e-05 23.5 1.5 1 23 983 1005 983 1005 0.99
17 21 0.00043 0.027 14.5 4.7 1 23 1011 1033 1011 1033 0.98
18 21 3.5e-05 0.0022 17.9 0.6 2 21 1047 1066 1047 1067 0.92
19 21 8.6e-05 0.0053 16.7 1.5 1 23 1074 1097 1074 1097 0.98
20 21 1.2 75 3.7 3.3 1 23 1103 1127 1103 1127 0.89
21 21 0.16 10 6.4 5.8 1 23 1133 1155 1133 1155 0.97

Sequence Information

Coding Sequence
ATGGCTTCCAAGCCTACGTGTAGAACGTGCGGTGGATGCAAGTATAAAGGAAAAGCCAAGCCTCTATTTCAAAGTGAAAGATGCAATGAAATTGTAGACCACATAGAAACAATAACTGGTCTCAGGCTGAATAATTTGCCTGATTTGCCaggccatatatgtatgaccTGCGAATTTGATTTAGATCAAGCAATTTCCTTTAGGAAACGATGCATAAGCACACATGAAAGATTGTCCACTATAGCTGAGGACcccataaatacaaatattggaGCTGACACTGAAGGACGAAACAATACCAATAAACACGAagaaagtttcaaaattttatttattccagAAAAGGTAGATGTTGATTATCGTTCATATTTTGAAGAGGAGGACGAAAGCAATGCCACCTCTGATTCAAAGGTTGATGAAAGCCTTGAGAAGGAATTAAATGAAGAGGATGCTCTTCAAGAGACATGCATCACGCACCAGGAATTCCCGATAGATAATGCCACATCCAACAGTGATATCTTTGCTGTAAATGATaccgaattaaaaaaaaatgggaacGATtgggaaaatatttcaacttcACAGAAGCTGGAGGAGCACTTTATTCTGGACgaacattttttacaaaataaaaacaaaaagcaagtTCATCatgtttgtaaattttgtGGAAAGGATTTTCATCACACCTTTAACTTTAAAACACATCTTCTTAAACATATGCGTAAATATccttataaatgtatgtactgtGAAAAAAGGTTTTACTCCTCATCGAACCGTGCGGTACACCATAGAGTCCATACAGGAGAGCGACCGTATAAgTGTGAAGTTTGCTACGTCGCATTCAAATTTAATCATCATTTAAAGAGACATAAGGAGTCTTTAGaacataaaaatagaatagataCTTCTGCAAGTAATGCATCATCATTAAATGTCGTGAAAATTGAGTCTATAACCAACCCAGAAGGTGACTGTGAAAGCCCTCATGGAGCAAAGAATCTATCTGTTGATTCGGACAAAGATGAAAAGAACGATAACGCTTCTCTCGATTCGATTGAGGACACCTTTGACAGTGTTATAGTAACAGATTGCAAGGTAGTCCCAAAAAATCAACTATCCAGCATTGAGGACGATGGAAACCGTGCCACCGCCACGGTCGATCCCATTGACGACATCTGTGAAAATTCTACAATAACGAATCCCATATCAAACCAGATCAATCACTTATCCAGCTCTGAGGACGATGAAAACAATTCGATTACTGACACCTGTAAAAGGGCTATAACAAACCGCAAACCAGTTAGTAATACTTGCAATAAATGTGACAAACATTTTTCTAGCTCCAAAAGTCTAAAAATTCACCTCATACGGCATTCCTGCGAAAAGCGGTTCGCCTGTGAATATTGCGAGAATAGGTTTTACAAAAGCCATTTGCTCCAGTTGCACATCCGTACGACTCATGAGGGCGCTGAATCTACTTCATCAAGGGCTCTTTATGAGAGATCACATAGTGGAGAATGTTCTTACAAGTGTCAATATTGCGAAAAGAAATTTATCAATATATCACAGCAAAAGAGACACGAAATTGTGCATACCGTGGAGCGGCCCTACAAGTGCGACTGGTGCGACgtctcatttaaatataaccaTCATCTAAAAAGACACCAACAAtcatgcaaaaacaaaagggcTTTTACTAAAGATAATCATAATTTagataaaagaaaagaagaagtaTTGAACAACATCGAAGAAAACTGCGTAACGTCACAAATGCCAGAAAAACTGTATGATGAACTGTTGTACAAATGTTTCCACTGTGAAAGAAGATTTAACACATCATCGAACCGGAATAAGCACCATAGAGTGCATTCAGGGGAACGGCCATTCAAGTGCGATTTGTGTGACGtctcatttaaattgaatcaCCACTTGCGGGCACATAAACAATCGTTGGAGCATCAGAAGAAAATCAGCATGAGTGCAGATAACATTGAAGATGAAGAATCATCTCGCAAATATAACGACCATTTCTGCGATCAATGTGGAAAACATTTTAAGGGCCGCTCAAACTATAGACAGCACGTTCTTCGACATTTGCGAACACCGCCATACAAATGTCAGTATTGTGAGAAGAGGTTCCATTCATGTTCCAACCGTGCGGCGCACCATAGAGTGCATACAGGAGAGCGACCATACAAgtgCGAATTGTGTGACGTAGCGTTCAAATCAAGCCATCATTTAAAAAGCCATCAGCAATCGATGgagcataataataaaaaaagggACATATCGACATATGAGACTAGATTGAGTAATGATAGTCAAAGTTATACGGAAAACCATCAAGAAAGAAGTACAAGTCCTCACATATTGAATGCTGAATGTAAATCACCGGTTTCTATGGACAATGAAGATCAACCCGTTGATATACATGAAGGCTCCATTGATGCGCCGAAGGAAACAACATTGAAAAATAATGCATTAGAAATCCATGAAGAAAGAAGTATAAGTCCACATACAACTGAACAGGATGACACTGATTACAAACCATCCAGTTCAGAGGATGATGAAGATGGGAATACTCCGGTTCTTCAGGCATCGATCAGCAACATCAGCGAAAGTAATAAGAAGAAAACTCCAAAACCAACcagaaaaaagaagagaagGATTGTTGATAGTATTTGTGAGCAGTGTGGAAAACACTTCACCGATCCAAATACCTTCAAGATTCATCAGCTCCGACATGCCGGTGACAAACGATTCCCATGCAATTTATGTGAGCGTAGATTTTACAAAAATCACATGCTCCAATTGCACATACGAACGGCTCATGAAGGAGAGAGGCCGTTTGTCTGCAGAATTGAAAACTGCAATAGACAATTTACCAGTTATACTACGAGATCAAATCATGAAAAaaCTCATATTCAGAGACCATCTTACAAATGTCTGCTGTGTgataaaacatttataaagaAGTCATCCCTCAATGATCACCAAAGAGTACATACAGGAGAACGTCCATTCAAaTGCGATATGTGTGTAAAGACTTTTAGACATCGCGGCTCATATAAAGAGCATAAACTTACGCACGTCCCAGGATTTGTGccaaaaaaacgaaattttaGTCGTGTTTGTGATCATTGTGGGCAAACATTTACTAATcaagataattataaaatgcatGTACTTCGACTAAGCGGGGAGAAGCCATTTCCATGCAAGTTATGTGATCgaaaattttatgcaaatcgcTATCTCCAAATGCACATACGTACGACACACGAGGGGGAGAGTCCTTTTCCGTGCCGCTACGAAAACTGTGGTAAAAAGTTTAATGACACCTCTACGAGACGTTGTCATGAGAGaatacattcacaacaatatCCTTACCGCTGTATATACTGTAACAAGGGATTTAACAGAGCTACGCATTGTGCTAAGCACCAAAGTACGCACCGCGAAGAGGCATAa
Protein Sequence
MASKPTCRTCGGCKYKGKAKPLFQSERCNEIVDHIETITGLRLNNLPDLPGHICMTCEFDLDQAISFRKRCISTHERLSTIAEDPINTNIGADTEGRNNTNKHEESFKILFIPEKVDVDYRSYFEEEDESNATSDSKVDESLEKELNEEDALQETCITHQEFPIDNATSNSDIFAVNDTELKKNGNDWENISTSQKLEEHFILDEHFLQNKNKKQVHHVCKFCGKDFHHTFNFKTHLLKHMRKYPYKCMYCEKRFYSSSNRAVHHRVHTGERPYKCEVCYVAFKFNHHLKRHKESLEHKNRIDTSASNASSLNVVKIESITNPEGDCESPHGAKNLSVDSDKDEKNDNASLDSIEDTFDSVIVTDCKVVPKNQLSSIEDDGNRATATVDPIDDICENSTITNPISNQINHLSSSEDDENNSITDTCKRAITNRKPVSNTCNKCDKHFSSSKSLKIHLIRHSCEKRFACEYCENRFYKSHLLQLHIRTTHEGAESTSSRALYERSHSGECSYKCQYCEKKFINISQQKRHEIVHTVERPYKCDWCDVSFKYNHHLKRHQQSCKNKRAFTKDNHNLDKRKEEVLNNIEENCVTSQMPEKLYDELLYKCFHCERRFNTSSNRNKHHRVHSGERPFKCDLCDVSFKLNHHLRAHKQSLEHQKKISMSADNIEDEESSRKYNDHFCDQCGKHFKGRSNYRQHVLRHLRTPPYKCQYCEKRFHSCSNRAAHHRVHTGERPYKCELCDVAFKSSHHLKSHQQSMEHNNKKRDISTYETRLSNDSQSYTENHQERSTSPHILNAECKSPVSMDNEDQPVDIHEGSIDAPKETTLKNNALEIHEERSISPHTTEQDDTDYKPSSSEDDEDGNTPVLQASISNISESNKKKTPKPTRKKKRRIVDSICEQCGKHFTDPNTFKIHQLRHAGDKRFPCNLCERRFYKNHMLQLHIRTAHEGERPFVCRIENCNRQFTSYTTRSNHEKTHIQRPSYKCLLCDKTFIKKSSLNDHQRVHTGERPFKCDMCVKTFRHRGSYKEHKLTHVPGFVPKKRNFSRVCDHCGQTFTNQDNYKMHVLRLSGEKPFPCKLCDRKFYANRYLQMHIRTTHEGESPFPCRYENCGKKFNDTSTRRCHERIHSQQYPYRCIYCNKGFNRATHCAKHQSTHREEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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