Basic Information

Insect: Scaptodrosophila lebanonensis
Gene Symbol: -
Assembly: GCA_003285725.2
Location: NW:4791205-4795499[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0014 0.085 13.0 0.9 1 23 210 232 210 232 0.96

2 24 0.01 0.65 10.2 1.4 1 23 238 260 238 260 0.97

3 24 0.19 12 6.2 1.1 2 23 292 313 291 313 0.95

4 24 0.057 3.6 7.8 1.2 1 23 386 409 386 409 0.93

5 24 0.33 20 5.5 2.2 2 21 419 438 418 439 0.94

6 24 1.1 68 3.8 4.0 2 23 449 470 448 471 0.94

7 24 4.7e-05 0.0029 17.6 0.8 2 23 519 540 518 540 0.97

8 24 2.7e-06 0.00017 21.4 2.8 1 23 547 569 547 569 0.98

9 24 0.63 39 4.6 2.4 2 23 610 631 609 631 0.93

10 24 0.57 35 4.7 0.2 1 23 721 744 721 744 0.94

11 24 0.00032 0.02 14.9 0.4 2 22 752 772 752 772 0.96

12 24 0.0065 0.4 10.8 0.6 1 23 781 804 781 804 0.94

13 24 1.2e-05 0.00072 19.5 1.0 1 23 834 856 834 856 0.97

14 24 0.00032 0.02 14.9 0.7 1 23 863 885 863 885 0.98

15 24 0.0024 0.15 12.2 0.4 3 21 913 931 912 932 0.95

16 24 0.00063 0.039 14.0 1.3 1 23 977 1000 977 1000 0.96

17 24 6.7 4.2e+02 1.3 0.3 3 21 1009 1027 1009 1028 0.92

18 24 0.042 2.6 8.3 0.7 2 23 1038 1060 1037 1060 0.94

19 24 0.0006 0.037 14.1 3.7 1 23 1087 1110 1087 1110 0.98

20 24 4.1e-06 0.00025 20.9 0.2 2 23 1135 1156 1134 1156 0.95

21 24 0.00028 0.017 15.1 3.2 1 23 1162 1184 1162 1184 0.99

22 24 1.2e-06 7.5e-05 22.6 3.1 1 23 1190 1212 1190 1212 0.98

23 24 1.5e-07 9.4e-06 25.4 2.3 1 23 1218 1240 1218 1240 0.99

24 24 0.001 0.064 13.3 0.1 1 22 1246 1267 1246 1270 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0014	0.085	13.0	0.9	1	23	210	232	210	232	0.96
2	24	0.01	0.65	10.2	1.4	1	23	238	260	238	260	0.97
3	24	0.19	12	6.2	1.1	2	23	292	313	291	313	0.95
4	24	0.057	3.6	7.8	1.2	1	23	386	409	386	409	0.93
5	24	0.33	20	5.5	2.2	2	21	419	438	418	439	0.94
6	24	1.1	68	3.8	4.0	2	23	449	470	448	471	0.94
7	24	4.7e-05	0.0029	17.6	0.8	2	23	519	540	518	540	0.97
8	24	2.7e-06	0.00017	21.4	2.8	1	23	547	569	547	569	0.98
9	24	0.63	39	4.6	2.4	2	23	610	631	609	631	0.93
10	24	0.57	35	4.7	0.2	1	23	721	744	721	744	0.94
11	24	0.00032	0.02	14.9	0.4	2	22	752	772	752	772	0.96
12	24	0.0065	0.4	10.8	0.6	1	23	781	804	781	804	0.94
13	24	1.2e-05	0.00072	19.5	1.0	1	23	834	856	834	856	0.97
14	24	0.00032	0.02	14.9	0.7	1	23	863	885	863	885	0.98
15	24	0.0024	0.15	12.2	0.4	3	21	913	931	912	932	0.95
16	24	0.00063	0.039	14.0	1.3	1	23	977	1000	977	1000	0.96
17	24	6.7	4.2e+02	1.3	0.3	3	21	1009	1027	1009	1028	0.92
18	24	0.042	2.6	8.3	0.7	2	23	1038	1060	1037	1060	0.94
19	24	0.0006	0.037	14.1	3.7	1	23	1087	1110	1087	1110	0.98
20	24	4.1e-06	0.00025	20.9	0.2	2	23	1135	1156	1134	1156	0.95
21	24	0.00028	0.017	15.1	3.2	1	23	1162	1184	1162	1184	0.99
22	24	1.2e-06	7.5e-05	22.6	3.1	1	23	1190	1212	1190	1212	0.98
23	24	1.5e-07	9.4e-06	25.4	2.3	1	23	1218	1240	1218	1240	0.99
24	24	0.001	0.064	13.3	0.1	1	22	1246	1267	1246	1270	0.91

Sequence Information

Coding Sequence: ATGCCGGTGGGCGAAATTTGTAGAACATGCGCGAGACAGACTTTCCATTTCGTTGAACTCTCAACTCATTCCGAGAAATGTGCAAATAAGAGTTTGTTGGAGGTGTTGCGAGAGTTGACAAAACTAGACCTATGTTTTGAACACGCGGAAGATATGCCACAATCTATTTGTAGCGAGTGCCACCAACGCTTGATAAGTGcctatgtatttgtattggaTGCGCAACAGGCGCACGAACAGCTGCTGTCAAAACTGCGCGCAAGCTCACTGGACGAGACGCCCATAGACATACCAATTCAGGTGAACATAAAAACTGAAATTGACATTGGTGAGGAGCGCTATCTGCCTGAAAACGGTAGCAGCAGCACGGATATAAACGTGACCAGCTCTGAGAAAAAACCGGAGAAGGAAGACAACAATATGGAAGATGCAGTACACGAAGACGATTATGACGACCACAAGCCCTTGGGCACTCGGCGTAGCTTGCGTAAAAACAGAAATAGAGAAGGAATAAAAGAGCAGAACGAAGCTAAAACGCAAATAAATGAGGAGGAGTCGCCCATTAAACGTCGACGTGGGCGTCCAGCACTCTATGATAGAACAGAATCCCTAAACGAGAGTGGCAGACATGCTTGTGATGTGTGTGGCAAGACATTTTCCTGGTTCCGCGATATGCAGCGTCATGCGCGTGTTCACTTTGAGCAAGCCTCATACGTGTGTGAGATGTGTGGCAAAGGTTTTCTGCGCAAGGACAAGTACACATTTCATTTGCGCTCTCATAAAAAAAGGGATGCCAAAAGCCAGGCTGTAACGCTTAACAATGAATGGCGGTTTGCGGAGCGACTCTACAGTTCGGGCAGACTAAAACTTGTGGAATGTAAGCTCTGTGGCTTAAAGTGCCAGCGAGTGCTTGAACTGCGACAGCATTTGTCCCTGCATGCCAACATCGAAACGCTAGATAACCTAACAATGAACAGCGATATAGTCCAGGTGCATTACAATCAGATGGAGATGCATGAGATCAAACATCAGATATGCTCAGACATTGCATCACAGAATATGGAAAAATACTATGCAGTGGTAAACGCACATGGGTACGAGCTGTGCCTTAGCGACTCGGATGAAGAGCCTTCTGTTGATGATGATAACAGCAAATACTATTGTGAGCCATGCAATTTGCCGTATACACGAAAACATCGTCTTATACGTCACACTTTGGAGGAACACAGCCAGGAGAGATCGGCGCCACCGCAAAGTTGTAGTGTCTGTCACATTGGCTTTGTCTGCAGCAAACTTTTAAAGCAGCACATGAAGAGCCAGTGCAACAATGCGTTAAAACGTTTGGTCTGTTCCCATTGCCCGGGAAAGTTTATGTGGCAACAGAATCTCGTTAGACATGCTTGCACCCATCATAAATCTGCTGATCATGATGAGTTGGGGCATTTCAAAAGAGAAACAGCGGGATCTCCGACAGATTCGGAGCCAATAGCCTCGGAACCTGTTGCCACTCGCAGAGGTAGAGGTAGACCTAAATCTTCTGGCTCCGTAAAGCTACAGTGCTCCGATTGTGAAAAGGTGTTTATGTGGCGCAAGGATCTGAATCGTCACATGCGCATGCATCAGCCAAACAGAGATCAGTTTGAATGTGCATACTGCGATCGAAAATTTCATCGCAAGGATGGATTGAAATCACATATGCGTGTACACAACGAGGAACTGGCAGCCACAACAGATACAAATTCTGCAGCCTTGGTGAAGCGTGAGGCTGTTGATCGAATGCCAGTGGTGCTAACACAACTAGCATATCCCAATGGTTGCAAGCAAATTCAGTGCATGATTTGTCtaacaaaacacacaaaaatttcTGATTTACGCACACATTTGCGGACCCATCAATATGTCGTCAACCTTCAAGATGAGCGTAGCACACCAGCAGCGATTGCCAGTATTTCATGTCAACTTTATCCAGAGCTTGCGCTTCCATTGTTAAAACAGGAATTGGTCGAGCGCATTATGAAAGATGTAGCCCAAAGCGTGGAGCTGGAACGCTTCTATTCGATCACCAATGAAGCTGGTAACGAGCTCAGCTTGGACAGCAGCGAAACAGACAGTGACTCGGAGGGAGAACTAGTTGTCGGTGATTCATTCAAGCAGGCTCGTTATGTATGTGAACTTTGCCGAGCGGCCCTGCCACGAAAGCACGAAATTTATGCCCATCAGCTGGAATTCCACGAATGGCAGGAAGCGAGTAATGTCTGCCCACACTGCAATGCTAGGTTTGTGGATGCGAAGCTGTTGGAGCATCATTATCGTACGCTATGTCGCAATACACAAAAGCGTTTTTTATGCAAGAAATGCCCGCTTCGCTTTCGGTGGAAGGGAAACCTCAGGTTGCACACGAATGTGGCCCATCAAGAGGTGCACGTTAAAGAGGATGCAGTGGCGCCAAAGCAGGCAGAAAACACTGAAAACACCACCAGCAAGGTCGCTGCCTCGAACTACAATTGTGCAGATTGCAAGCGCAGCTTTAGCATGCAAAAAGATCTCACCAGGCACGTTCTTATGCATGGGAAGGATGCGAACATTTATCGTTGTCGTTGGTGTGCCCGTCGCTTCTATCGGCTTGCAAACTTACTTCAGCACATCGAGCGGCATGGCATCAATGCGGCCCAACTTCCATATGCCGAAGCTCTAGTCAATGTCAATCGCCATGCTAATGGCCAAAAGTGTATTCTCTGCAAGGTGTGCGATTGTAGTTTCAGCAGCATTGCTGAACTGCGGGCCCATCTTCAAAACACACCAGCGGGCACGCATTTTGATTATGGATCGCTGCAGAACTATTCCATTACCAATGAACTTGGCTACGAGCTGCATTTGGATGATTCTGAAACGGATGAGGATAGCAAGGCGCCGAATGCTCCACCACATTATACCTGCTCCATCTGTAAGCTCCGTGTCCGACGCAAGTATGAGCTCTATCAGCATCAACAAGCTATGCATCCCCTGGAGCGTATTACCGACGGCTGCCCGCACTGCATCTTCAAGAGCGTTTCACCCGCGCTTCTCGAGCATCACAAACGTGTACAGTGTGAGAATACAGAGAAACAGCTGAAGTGCAGCAAATGCGACTACAAATTTATGTGGGAGACGAACTTGTTGTTGCACATGCAACTGCAGCACAGCGGGGAAACAGAGTCGTCCACTATGCCATTGGAACAGAAAACGATAGCCAGAGAAGTCATCGATCAGGGTAGAATCTTCCAGTGCAGTAACTGCCCATGCAAATACAATCGCAAGGATCGACTGACAGCACACATTAAAAAGATGCACACGCAGAGCTTACCATCAACATCGAAGGCCGCTCTGCTGGTAGACAAACATCAAAACCAGCCCAAACGTTTCCTCTGTGCTTTCTGCGGCAAAGCTGTTAGTTCGTCATCGAATCTTATCATACACATGCGTCGCCACACAGGCGAAAAGCCATTCAAATGCGAATACTGTGAAATGGCTTTTCCGCGCTCTTCCGACTTGCAGTGCCATCGGCGAAAGCATACGGGCGAACGTCCGCATGTCTGCACGGTGTGTCAAAAAGGCTTTTCACGCTCCTATAAACTTCGCCAACACATGCGAATACATAACGGCGAACGTCCATACAAATGCAGCTATTGCGAGAAGAGCTTTACGCAGTCAAACGACCTCACACTCCACATAAGACGGCACACCGGGGAGCGTCCCTATCCTTGCGGCATCTGCGGTGAACGTTTCATACAGGGCACGGCGCTGAAGAACCATCGGATGCAGCAAGGCCACTACGAAGCTGCTGAAGAAGACACTGCAGAGGAGCCAAAGGGCGGCCACGCGATGTTAGCGGAATATGTAGCCGAGTGA
Protein Sequence: MPVGEICRTCARQTFHFVELSTHSEKCANKSLLEVLRELTKLDLCFEHAEDMPQSICSECHQRLISAYVFVLDAQQAHEQLLSKLRASSLDETPIDIPIQVNIKTEIDIGEERYLPENGSSSTDINVTSSEKKPEKEDNNMEDAVHEDDYDDHKPLGTRRSLRKNRNREGIKEQNEAKTQINEEESPIKRRRGRPALYDRTESLNESGRHACDVCGKTFSWFRDMQRHARVHFEQASYVCEMCGKGFLRKDKYTFHLRSHKKRDAKSQAVTLNNEWRFAERLYSSGRLKLVECKLCGLKCQRVLELRQHLSLHANIETLDNLTMNSDIVQVHYNQMEMHEIKHQICSDIASQNMEKYYAVVNAHGYELCLSDSDEEPSVDDDNSKYYCEPCNLPYTRKHRLIRHTLEEHSQERSAPPQSCSVCHIGFVCSKLLKQHMKSQCNNALKRLVCSHCPGKFMWQQNLVRHACTHHKSADHDELGHFKRETAGSPTDSEPIASEPVATRRGRGRPKSSGSVKLQCSDCEKVFMWRKDLNRHMRMHQPNRDQFECAYCDRKFHRKDGLKSHMRVHNEELAATTDTNSAALVKREAVDRMPVVLTQLAYPNGCKQIQCMICLTKHTKISDLRTHLRTHQYVVNLQDERSTPAAIASISCQLYPELALPLLKQELVERIMKDVAQSVELERFYSITNEAGNELSLDSSETDSDSEGELVVGDSFKQARYVCELCRAALPRKHEIYAHQLEFHEWQEASNVCPHCNARFVDAKLLEHHYRTLCRNTQKRFLCKKCPLRFRWKGNLRLHTNVAHQEVHVKEDAVAPKQAENTENTTSKVAASNYNCADCKRSFSMQKDLTRHVLMHGKDANIYRCRWCARRFYRLANLLQHIERHGINAAQLPYAEALVNVNRHANGQKCILCKVCDCSFSSIAELRAHLQNTPAGTHFDYGSLQNYSITNELGYELHLDDSETDEDSKAPNAPPHYTCSICKLRVRRKYELYQHQQAMHPLERITDGCPHCIFKSVSPALLEHHKRVQCENTEKQLKCSKCDYKFMWETNLLLHMQLQHSGETESSTMPLEQKTIAREVIDQGRIFQCSNCPCKYNRKDRLTAHIKKMHTQSLPSTSKAALLVDKHQNQPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCEYCEMAFPRSSDLQCHRRKHTGERPHVCTVCQKGFSRSYKLRQHMRIHNGERPYKCSYCEKSFTQSNDLTLHIRRHTGERPYPCGICGERFIQGTALKNHRMQQGHYEAAEEDTAEEPKGGHAMLAEYVAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -