Sleb010687.1
Basic Information
- Gene Symbol
- Hr38
- Assembly
- GCA_003285725.2
- Location
- NW:6532410-6537367[-]
Transcription Factor Domain
- TF Family
- ESR
- Domain
- zf-C4|ESR-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00031 2.1 7.5 2.0 12 85 43 172 34 177 0.55 2 3 0.028 1.9e+02 1.1 1.0 213 230 317 334 301 384 0.59 3 3 1.3e-40 8.8e-37 126.8 0.0 1 268 613 876 613 880 0.92
Sequence Information
- Coding Sequence
- ATGTTACTTTTGCAACCCAATAGCTCCTTCAGTTCACTCTCGCCGTTTGACAACTTCTCAACGCAAccagcgacgacgacgtccTCTAGCAACACCAGCAGCTCACACCATCATCTCCACCATCAGCACCAcctacagcagcaacagcaacagcatcagcagcatcagcagcagcagcatcagcagatactgcagcagcagcaacaacaacagttgccaCAATTGCTGCCCGCGTCCAGTCAGGACACGCTGTTGTCCCATGAGGAGGACCAACTGATTAGCAATCTGACCGACGCAGCTGTCTCCCACACCGAGCTCTTTTCGGATCTTTTCTTTCCCTCGGACTCCAACAACTCGCTCCTATCGCCTGTCTTGGATCAGTCGACCGCCAGCTACACCGAATCCCACACCACTCCGAGCAATTTGCACTCCCCCTGCGATACCTTGGTTGGTAGCAGCGAAGACATCACCAACTCCATTGCAAACCTCACTAAGTTGACCTGCCTACGCGACAAACGTCTACCCTCCATACCTGAACAGCCGGCCAGCTCGGGGGCTCACGAGCATAACTTGTTGTCCTTTGAGCGCAGCGTACCGCAGGAGTTGGGTTTGTTGAGCCTGCGCTCCAGCAGCGATCCGGCCATTGCTCTCCacgcacaacagcaacagcagcagcaggaacacTTTCAGCGTCACGGTGCCACAGACCTCTTGATCTCACCCATAGCCGGTCCGCTCTCTTGCGGCAGCTCCTTGCCCAGCTTCCAGGAGACATACTCCCTGAAgtacaacagcagcggcagcagtcCTCAGCAGGAGGGGGGCACCCCCACGGGCACGCCCACTGATCAGGTGCTCACGCTCAAAATGGATGAGGATTGCTTTCCATTGACTACAGTCGCTGAGGTCATGTCCGGCCTTAATGCCAGTCATGGCCAGCTCCAACATATGCACCagcttcagcagcaacaacagcaacagcagcagcaacagcagcaacagcaccaacaacaaccgctTATGCCACATcctagtggcagcagcagtaacaacaacaacaacagcaactcttCATATAACTATCATGGTCATTTCAATGCAATCACCACGACTTCCAATCCATCGCCAACATCCTCGGCCTCGTCCTTGTACGAGTTCAATATGGGAAGTGGCTCCAACAATGGCAGTCGCGAGCAGTTGCCAAGCTTCTCAAACACAGATGGCTTTTATCAGCAGACCTACCAGCAACAAAACTATGCTTCGCACAATGGCGAACGCTATTCCTTACCGACATTTCCCACCATTTCGGAGCTGGAAGCGGCAACCGCTGCTGTGGCCGCTGCCGCCGCAGGCGTTAACGCCACTTCAATGCCACCTGTACGCCGTGCTTCGTTGCCAGTGCAGCGTTCCGCTTCACCCACTTCCGCCACTCAAAGTCCCAAGCTGGCCAAGCTTACGTTGGGCGCACGACATGCCGTTGCCGCTGCAGCGCTTCAGTTGTCCAGTGCACCCAACTCGGCGGCTAGTTCCCCTGCCAGTTGCCGCCAGCAGTTGACGCCGTCAACACACAATGTCGCTGGAGATCTGCTGAATGGTGGACGCATCCTGCAGTCCTCCTCACAGCTGTGCGCTGTTTGTGGGGATACTGCTGCCTGCCAGCACTACGGCGTGCGCACCTGTGAGGGCTGCAAGGGCTTCTTCAAGCGAACCGTTCAGAAGGGTTCCAAGTACGTCTGTCTGGCGGACAAGAACTGTCCAGTAGACAAGCGACGACGCAATCGCTGTCAATTCTGTCGCTTCCAGAAGTGTTTGGTCGTCGGCATGGTTAAGGAGGTGGTGCGTACGGATTCGTTGAAGGGTCGACGTGGTCGCTTGCCTTCTAAGCCCAAGTCGCCACAGGAGTCGCCACCATCACCACCGATTTCACTGATAACAGCACTAGTGCGCAGTCATGTAGATACTACTCCGGATCCCTCTTGCCTGGACTACACACATTACGAGGAGCCAGACATCAGCACGTCGCCCAGCGGTGGTCTGGGCATGACCGAAGCCGACAAAGTGCAACAGTTCTATCAGTTGCTCACCAGCTCCGTGGATGTCATCAAGCAGTTTGCCGAAAAGATACCCGGCTACAATGATCTCTTGCCAGAGGACCAGGAGTTGCTCTTTCAGTCCGCCTCCCTGGAGCTTTTCGTCCTACGCCTATCGTACCGGGCGCGCAGCGACGACGACAAGCTCATCTTCTGCAATGGCATTGTGCTCCATCGGACCCAATGCCAGCGCTCGTTCGGGGACTGGCTCGGCGGCATAATGGAGTTCAGTCGCAGCTTGCACAATCTTGAGATTGATATTTCGGCATTTGCCTGCCTCTGTGCGCTGACTCTGGTAACAGAACGACATGGCCTGCGAGAGCCCAAGAAGGTAGAGCTGTTGCAAATGAAGATTATCGGCAGTCTGCGCGATCATGTCACGTACAATGCCGAGGCCCAGAAGAAACAACACTACTTCAGTCGGCTGCTCGGAAAATTGCCCGAGCTGCGGTCACTGAGTGTCCAGGGTCTACAgcgaatattttatttaaaactcgAGGATCTAGTACCGGCGCCCGCTCTCATCGAGAACATGTTCGTCACAACTTTGCCCTTCTAA
- Protein Sequence
- MLLLQPNSSFSSLSPFDNFSTQPATTTSSSNTSSSHHHLHHQHHLQQQQQQHQQHQQQQHQQILQQQQQQQLPQLLPASSQDTLLSHEEDQLISNLTDAAVSHTELFSDLFFPSDSNNSLLSPVLDQSTASYTESHTTPSNLHSPCDTLVGSSEDITNSIANLTKLTCLRDKRLPSIPEQPASSGAHEHNLLSFERSVPQELGLLSLRSSSDPAIALHAQQQQQQQEHFQRHGATDLLISPIAGPLSCGSSLPSFQETYSLKYNSSGSSPQQEGGTPTGTPTDQVLTLKMDEDCFPLTTVAEVMSGLNASHGQLQHMHQLQQQQQQQQQQQQQQHQQQPLMPHPSGSSSNNNNNSNSSYNYHGHFNAITTTSNPSPTSSASSLYEFNMGSGSNNGSREQLPSFSNTDGFYQQTYQQQNYASHNGERYSLPTFPTISELEAATAAVAAAAAGVNATSMPPVRRASLPVQRSASPTSATQSPKLAKLTLGARHAVAAAALQLSSAPNSAASSPASCRQQLTPSTHNVAGDLLNGGRILQSSSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPDPSCLDYTHYEEPDISTSPSGGLGMTEADKVQQFYQLLTSSVDVIKQFAEKIPGYNDLLPEDQELLFQSASLELFVLRLSYRARSDDDKLIFCNGIVLHRTQCQRSFGDWLGGIMEFSRSLHNLEIDISAFACLCALTLVTERHGLREPKKVELLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336759;
- 90% Identity
- iTF_01319809;
- 80% Identity
- iTF_01319809;