Sleb008667.1
Basic Information
- Gene Symbol
- CSRNP3
- Assembly
- GCA_003285725.2
- Location
- NW:5146693-5152799[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.41 5.5e+03 -3.4 0.1 85 113 73 100 36 119 0.50 2 3 0.6 8e+03 -3.9 1.9 84 109 147 172 97 184 0.54 3 3 9.5e-95 1.3e-90 302.7 9.8 2 218 388 590 387 590 0.91
Sequence Information
- Coding Sequence
- ATGTTTAATCCATTAAAAAAGATACTCACGTACATACAGAAGAATGCCAGCAGAGACAACATGTTTCGCAACACATCAAGCACCAATAACAGCATTTTGGCCAACGACGAAGGCGTAGGTGGGAAGACGAACCGAGGCAGCGATGTCGAAGAGCAAGAGGAGAACGAGAGTGGTGTCACATACCAGGCTGGTGCCAACGACCTGCCCGGAACTGCTGGGCAAATCGATCAAAATGCTCAAGACAATGATGCTGACGCCGAAGATCCAGAAGAATTCATAGCGGAGGATGAGGAATTTCAATACGATATTGAGAGTCAAATCAAAACCTCCATTATCGATGCGACCAAAGTGAAGCCCCAAACGTCGCCAAACGCGCAGCTCGATGACGAGCTCGCCGACTTTGCCGAAGCACCCCACGAACTCAATGGCGTTGGCGACGATGAGGAGGATGAAGACGACGAGGGTGCGGCCGATGGTGAcggcgatgatgatgacgaagaAGTGGAAGTGGACGAGCAATATCTCGAGCTAGATAATTTTCCGAATAATGAGATCATTGTACTTGCTGATACGGATCTCAATTCATCGCTTGCGTCAGACAATGTGTCCGAAGATCCCCTGGCCATAGATGATTTCACACAGCCGCTGGTTCGTGATTCTGACAATGTGTTGGACTCATCGTCGGTGACAACTAACGAAGAGGTGGATACCAGCGGCGACCTAACGTGGTTGAAACTGCCGCCCGATGGCGATGAGCAGGAGACCTCCACCAGCTTACAGGCAACGGCGCATCATTCGCATGGCCCTGAATTAAGCGTCACACCCACACATGTTAAGACCAAAGAGGATGAGTTGCGCAGCGATGGTGGTTCCGATTCTGGCTTGGGCAGCGAAACCTCAACACTGCAAATGACGCTTACAAGCCGAAGCGACAGCGCGAAAGCCGCGCCCACACATGAAGGAGTCCCTACAGGGACGTCGTTGGGGACAATCCCAAACAGCAGCGATGCCACAGACTTACCAGTGGCTTCCACCTCCCAGGCCAGCAGCGACCCAAAGCGGCCGTTGCGCTCCAATCTAAAGCGACGACTCGAGGATGCCGATGGCATGGATCTGGTACCAGATATGAGCACCACCTCAGCCGCATCCACGACGAAGCGTCAGAAGCGATCCATCAATTTTGACTCTGTCCAAGTGTACTATTTCCCACGCCAGCAGGGATTTGGTTGTGTGCCCACAGTCGGCGGCTGCACGCTGGGCATGGGCGCCAGACATATTGCCTTTAAGACCATGACGCTGGCGGAGCATGCGGCGGAACTGAGGCGAGCGCACCGCAATCAAAATCCAGACATGCAGCCACGTGGCTCCTCCAGCGACGACACCGAGGAGTCTGAAGAGGATTACTTGAGTGAGGGAAGTGGCTCGGATGCGGATGGTGACTCCAATGGCTTCCTACAGCCGGTGACGCCCAAACAGCGGCGAGCGTTGCTCAAGGCAGCGGGAGTCCGCAAAATCGATGCAAGCGAAAAGATCGAATGCCGCGACATTCGCAATTCCCGCGAAGTGTGTGGCTGTTCGTGTCGCGAGTTCTGTGATCCCGAGACATGTGCCTGCAGTCAGGCGGGCATCAAGTGCCAGGTGGATCGAGCCATGTTTCCGTGCGGTTGCACGCGTGAGGCATGCGGCAACACTGTCGGACGCGTCGAATTCAATCCGACGCGTGTCCGCACCCATTATATACACACGGTCATGCGTCTGGATATGGAACAGCGTCAGGGACAAAATCCAAGCAACACCCTAAACTACAGCAGCAGTGGGAACAGCGGCGTATCAGCTGCCGTTTCCCATTGCTACTTTATGCAAACTCAGTCGAACTATAGTTCCGGCTATGCCTCTCCAGCCTACACGCCCGATGGCAGCGTCAGTTACTATCAGCAGCAAACACCAACATCAGCGTCGGcggcgcagcagcagcaggaacaacaatCCAGCTATAGCTCGCATCCGGATCTGCACACTCCTCAGTATGCAATAGATAGTCTGGATCCGAATCTGTTTGCCAGCGGCACTAATGCCACGCCCTCATACGGCGAACTACTGGCGCCCACGTATCACAGCCTAAGCTATGGTGGAGCTACAAGTACTAATGCCTCGCAGCTGTCGCCCTACAATGCCTATCACCAACATCAGaccagcagcagcgccagcgTGAGCGGCTCATATTCGCCTTCAGGAGTGAGAGCAGCTGGAACCGCTTTACCACCCAGTACGTACAGCTCCTGTGCAGTGCCATCGGCGCCACCATTTGGTATTGCCACAACCACTGCGTCCGCCATTCAATATCACCATGCGATCGTACTCGAAACCACCGCCTCAATGACCTCGACCACAACGTTCCTTGCGGCTGCGCCCACTGGCACGGCAACATGTGCCTTCAGTGGCGCTCGCCAAGCGGCTGGAGGCGGCAACGGCAGTGCCTCTGAATTTATCAGCCTAAGCTCACCTATTGCCAGTTCCTCGCGCCTCTCACAAATCAACGATCTGCTGCAGCACAATCGCAACACCACCGCCGCACTCGTGGCCGTCTCCGAATCCCCCGGCAGCTCGCTGGGTTATGCCGCCGGCGGACGCAACGCAGGAAGCGCTGTTACCGATCAGAGACAGCATAGCGGGGCGGGCAATACGAACACGGTCATGGACTCAATAGACACGCCCCCCATCGAGGATGCACAACGCAGTTGTATGGCCTTTGACGAACTACCGCCCCCCATGCTGAATCCCACGCCCATTGTGGCCGTGCTGGAGCCCAATGCTGGCAAACTGCCAGAGTCTGCAACTGGGATGGGCGCGAAATCGACCGCTCAGATGCCACTCCAGCAGCCACCGTCAACGCCACAGCCGCGACAACCATTAGACGTCAGTCTCAATGGGGGTTGCGCCACCGATTAG
- Protein Sequence
- MFNPLKKILTYIQKNASRDNMFRNTSSTNNSILANDEGVGGKTNRGSDVEEQEENESGVTYQAGANDLPGTAGQIDQNAQDNDADAEDPEEFIAEDEEFQYDIESQIKTSIIDATKVKPQTSPNAQLDDELADFAEAPHELNGVGDDEEDEDDEGAADGDGDDDDEEVEVDEQYLELDNFPNNEIIVLADTDLNSSLASDNVSEDPLAIDDFTQPLVRDSDNVLDSSSVTTNEEVDTSGDLTWLKLPPDGDEQETSTSLQATAHHSHGPELSVTPTHVKTKEDELRSDGGSDSGLGSETSTLQMTLTSRSDSAKAAPTHEGVPTGTSLGTIPNSSDATDLPVASTSQASSDPKRPLRSNLKRRLEDADGMDLVPDMSTTSAASTTKRQKRSINFDSVQVYYFPRQQGFGCVPTVGGCTLGMGARHIAFKTMTLAEHAAELRRAHRNQNPDMQPRGSSSDDTEESEEDYLSEGSGSDADGDSNGFLQPVTPKQRRALLKAAGVRKIDASEKIECRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQGQNPSNTLNYSSSGNSGVSAAVSHCYFMQTQSNYSSGYASPAYTPDGSVSYYQQQTPTSASAAQQQQEQQSSYSSHPDLHTPQYAIDSLDPNLFASGTNATPSYGELLAPTYHSLSYGGATSTNASQLSPYNAYHQHQTSSSASVSGSYSPSGVRAAGTALPPSTYSSCAVPSAPPFGIATTTASAIQYHHAIVLETTASMTSTTTFLAAAPTGTATCAFSGARQAAGGGNGSASEFISLSSPIASSSRLSQINDLLQHNRNTTAALVAVSESPGSSLGYAAGGRNAGSAVTDQRQHSGAGNTNTVMDSIDTPPIEDAQRSCMAFDELPPPMLNPTPIVAVLEPNAGKLPESATGMGAKSTAQMPLQQPPSTPQPRQPLDVSLNGGCATD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -